Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is 126454480

Identifier: 126454480

GI number: 126454480

Start: 2240211

End: 2241959

Strand: Direct

Name: 126454480

Synonym: BURPS1106A_2254

Alternate gene names: NA

Gene position: 2240211-2241959 (Clockwise)

Preceding gene: 126453844

Following gene: 126452070

Centisome position: 56.17

GC content: 69.58

Gene sequence:

>1749_bases
ATGAAGCCTGTCGTTCGCCTTACCGCTTCCGCCACCCGCGCGCTGCCGCGCTGGCTGCTGCTCACGCTCTGCATCGTCTA
CGCGGCGTTCGGGCTGTTCGGCCGCGATCCGTGGAAGAACGAGGACGCGGCAGGCTTCGGCGTGATGTGGACGATGGCGC
AAGGCGGCCTGCACGACTGGCTGCTGCCCAATCTCGTCGGCAAATTCGTCACGTCCGACGGGCCGCTCGGCTACTGGCTC
GGCGGCCTCGCGATTCGCGCGCTGCCGTGGGTCGACGCGAGCAACGCGTCGCGCGTCTACACGGGTGTGCTGTTCTGCGT
CGCGTGCGCATTCGTCTGGTACGCGGCCTATCTGCTCGGCCGGCGCGCCGAGATCCAGCCGTTCAAGTACGCGTTCGGCG
GCGAGCCCGAGCCGCGCGACTACGGGCGCACGCTCGCCGACGGCGCGCTGCTCGTGCTGCTCGCGTGCTTCGGCCTTGCC
GAGCGCGGCCACGAAACGACGCCGCAGCTCGCGCAGTTCGCATGCATCGCGACGTTCGTCTACGGACTCGTGCGCGCGAT
CGACAAGCCGACGCAAGGCGCGCTCTGGTGGGGCCTCGCGCTCGGCCTCGTCGCGCTGTCGGGCAACCCGGTGCTCGTCG
CCGCGCTCGCGCTCGGCACGCTCGCGCTCTATCTCGTCACGCCCGAGATCCGCTGCGTGCAACTGCCGGCGATCGGGCTG
CCGCTCGCCGTGGCCGTGTTCGCGATCTGGCCGCTCGCCGCGTACATCGCGTTTCCCGACGACGCGAACTGGTTCTTCAA
CCAATGGCTGCACGGCAGCCTGATGCGCTTCTCCGGCCCGCCCACGACGGTGCTCGCGTACGCGGCGAAGAACCTGCCGC
TCTTCACGTGGCCCGCGTGGCCGCTCGCGATCTGGGCATGGGTGAGCTGGGCGGGGCTGCGCCGCCGGCCGCACATCGCG
ATTCCGCTGTCGGTCGCCGCGCCGCTCCTCGCGCTCGTGATCCTGCAGAGCCAGCAGACGAACCGGATGTACATGCTGCT
GCTGCCCGCCCTCGCCGTCATCGCGACGTTCGCGCTGCCGACGCTCAAGCGCGGCGCGATCAACGCGATCGACTGGTTCG
CGGTGCTGAGCTTCACGATCCTCGGCACGTTCGTGTGGCTCGTGTGGCTCGCGTCGCTCACGGGCTTCCCGCATCCGCTC
GCGCGCAACCTCGGCCGCCTGGTGCCGGGCTACGAGCCGCACTTCAAGGTGCTGTCGTTCGTGTGCGCGGTCGCCGCGAC
CGCATGCTGGCTGATGCTCGTGCGCTGGCGCATCTCGCGGCAGCCGAAGGTGCTCTGGCGCAGCGTGGTGCTGTCGAGCG
CCGGCACGACGCTGATGTGGGTGCTGCTGATGACGCTGTGGCTGCCGATCGTCAATTACAGCCGGACCTATCGCGACGTC
GCGCAGCAGATCGCCGCGCACCTGCCGTCCGATTACGAATGCATCTCGCCCGTGCGGCTCGGCGACGCGCAGATCGCGAC
GTTCGCGTATTTCGGCGACATGCACTTCTCGTTCACCGATGACTGCGACGTGATCCTGCGCCAGGATCGCGCGGACTTCG
GCGAGCCGAGTTCGATCTCGCAATACGTGTGGCGCCTCGTGTGGGAAGGCCGCCGCGTCGCCGACCGCGACGAGCGCTTC
CGCCTGTACGAGCGAATCGAGCGCCCGAAGACGCCCGTCAAGCGCCGCCCGCCGCGCAAGGCCCGCTGA

Upstream 100 bases:

>100_bases
TCGCTGACGCGTGCCGGCCGGCGCGTCTACAATGCCGGATGCCCGAAACCGCCCGCCGCTCGCGCGCCGGCATGTCGTCC
ATCCTCTTGCCCCCATCTGC

Downstream 100 bases:

>100_bases
CCGATGTTCGGCGACATCCGCCGGATCGCCGGTCTCGCCTGGCCGGTGCTCGTCGGCCAGCTCGCGATCATCGCGTTCGG
CGTGATCGATACCGCGATGG

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Inner Membrane Protein; Glycosyl Transferase Family Protein; Glycosyltransferase; Glycosyl Transferase Family; PMT Family Glycosyltransferase; Glycosyltransferase Pmt Family

Number of amino acids: Translated: 582; Mature: 582

Protein sequence:

>582_residues
MKPVVRLTASATRALPRWLLLTLCIVYAAFGLFGRDPWKNEDAAGFGVMWTMAQGGLHDWLLPNLVGKFVTSDGPLGYWL
GGLAIRALPWVDASNASRVYTGVLFCVACAFVWYAAYLLGRRAEIQPFKYAFGGEPEPRDYGRTLADGALLVLLACFGLA
ERGHETTPQLAQFACIATFVYGLVRAIDKPTQGALWWGLALGLVALSGNPVLVAALALGTLALYLVTPEIRCVQLPAIGL
PLAVAVFAIWPLAAYIAFPDDANWFFNQWLHGSLMRFSGPPTTVLAYAAKNLPLFTWPAWPLAIWAWVSWAGLRRRPHIA
IPLSVAAPLLALVILQSQQTNRMYMLLLPALAVIATFALPTLKRGAINAIDWFAVLSFTILGTFVWLVWLASLTGFPHPL
ARNLGRLVPGYEPHFKVLSFVCAVAATACWLMLVRWRISRQPKVLWRSVVLSSAGTTLMWVLLMTLWLPIVNYSRTYRDV
AQQIAAHLPSDYECISPVRLGDAQIATFAYFGDMHFSFTDDCDVILRQDRADFGEPSSISQYVWRLVWEGRRVADRDERF
RLYERIERPKTPVKRRPPRKAR

Sequences:

>Translated_582_residues
MKPVVRLTASATRALPRWLLLTLCIVYAAFGLFGRDPWKNEDAAGFGVMWTMAQGGLHDWLLPNLVGKFVTSDGPLGYWL
GGLAIRALPWVDASNASRVYTGVLFCVACAFVWYAAYLLGRRAEIQPFKYAFGGEPEPRDYGRTLADGALLVLLACFGLA
ERGHETTPQLAQFACIATFVYGLVRAIDKPTQGALWWGLALGLVALSGNPVLVAALALGTLALYLVTPEIRCVQLPAIGL
PLAVAVFAIWPLAAYIAFPDDANWFFNQWLHGSLMRFSGPPTTVLAYAAKNLPLFTWPAWPLAIWAWVSWAGLRRRPHIA
IPLSVAAPLLALVILQSQQTNRMYMLLLPALAVIATFALPTLKRGAINAIDWFAVLSFTILGTFVWLVWLASLTGFPHPL
ARNLGRLVPGYEPHFKVLSFVCAVAATACWLMLVRWRISRQPKVLWRSVVLSSAGTTLMWVLLMTLWLPIVNYSRTYRDV
AQQIAAHLPSDYECISPVRLGDAQIATFAYFGDMHFSFTDDCDVILRQDRADFGEPSSISQYVWRLVWEGRRVADRDERF
RLYERIERPKTPVKRRPPRKAR
>Mature_582_residues
MKPVVRLTASATRALPRWLLLTLCIVYAAFGLFGRDPWKNEDAAGFGVMWTMAQGGLHDWLLPNLVGKFVTSDGPLGYWL
GGLAIRALPWVDASNASRVYTGVLFCVACAFVWYAAYLLGRRAEIQPFKYAFGGEPEPRDYGRTLADGALLVLLACFGLA
ERGHETTPQLAQFACIATFVYGLVRAIDKPTQGALWWGLALGLVALSGNPVLVAALALGTLALYLVTPEIRCVQLPAIGL
PLAVAVFAIWPLAAYIAFPDDANWFFNQWLHGSLMRFSGPPTTVLAYAAKNLPLFTWPAWPLAIWAWVSWAGLRRRPHIA
IPLSVAAPLLALVILQSQQTNRMYMLLLPALAVIATFALPTLKRGAINAIDWFAVLSFTILGTFVWLVWLASLTGFPHPL
ARNLGRLVPGYEPHFKVLSFVCAVAATACWLMLVRWRISRQPKVLWRSVVLSSAGTTLMWVLLMTLWLPIVNYSRTYRDV
AQQIAAHLPSDYECISPVRLGDAQIATFAYFGDMHFSFTDDCDVILRQDRADFGEPSSISQYVWRLVWEGRRVADRDERF
RLYERIERPKTPVKRRPPRKAR

Specific function: Unknown

COG id: COG1807

COG function: function code M; 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 64977; Mature: 64977

Theoretical pI: Translated: 9.80; Mature: 9.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPVVRLTASATRALPRWLLLTLCIVYAAFGLFGRDPWKNEDAAGFGVMWTMAQGGLHDW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEHHHCCCCHHH
LLPNLVGKFVTSDGPLGYWLGGLAIRALPWVDASNASRVYTGVLFCVACAFVWYAAYLLG
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
RRAEIQPFKYAFGGEPEPRDYGRTLADGALLVLLACFGLAERGHETTPQLAQFACIATFV
CCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
YGLVRAIDKPTQGALWWGLALGLVALSGNPVLVAALALGTLALYLVTPEIRCVQLPAIGL
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCH
PLAVAVFAIWPLAAYIAFPDDANWFFNQWLHGSLMRFSGPPTTVLAYAAKNLPLFTWPAW
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHCCCCCHHHHHHHHCCCCEEECCHH
PLAIWAWVSWAGLRRRPHIAIPLSVAAPLLALVILQSQQTNRMYMLLLPALAVIATFALP
HHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
TLKRGAINAIDWFAVLSFTILGTFVWLVWLASLTGFPHPLARNLGRLVPGYEPHFKVLSF
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHH
VCAVAATACWLMLVRWRISRQPKVLWRSVVLSSAGTTLMWVLLMTLWLPIVNYSRTYRDV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AQQIAAHLPSDYECISPVRLGDAQIATFAYFGDMHFSFTDDCDVILRQDRADFGEPSSIS
HHHHHHHCCCCCCCCCCCCCCCCHHHHHEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHH
QYVWRLVWEGRRVADRDERFRLYERIERPKTPVKRRPPRKAR
HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKPVVRLTASATRALPRWLLLTLCIVYAAFGLFGRDPWKNEDAAGFGVMWTMAQGGLHDW
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHEEHHHCCCCHHH
LLPNLVGKFVTSDGPLGYWLGGLAIRALPWVDASNASRVYTGVLFCVACAFVWYAAYLLG
HHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
RRAEIQPFKYAFGGEPEPRDYGRTLADGALLVLLACFGLAERGHETTPQLAQFACIATFV
CCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
YGLVRAIDKPTQGALWWGLALGLVALSGNPVLVAALALGTLALYLVTPEIRCVQLPAIGL
HHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEECCCCCH
PLAVAVFAIWPLAAYIAFPDDANWFFNQWLHGSLMRFSGPPTTVLAYAAKNLPLFTWPAW
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHCCCCCHHHHHHHHCCCCEEECCHH
PLAIWAWVSWAGLRRRPHIAIPLSVAAPLLALVILQSQQTNRMYMLLLPALAVIATFALP
HHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
TLKRGAINAIDWFAVLSFTILGTFVWLVWLASLTGFPHPLARNLGRLVPGYEPHFKVLSF
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHH
VCAVAATACWLMLVRWRISRQPKVLWRSVVLSSAGTTLMWVLLMTLWLPIVNYSRTYRDV
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AQQIAAHLPSDYECISPVRLGDAQIATFAYFGDMHFSFTDDCDVILRQDRADFGEPSSIS
HHHHHHHCCCCCCCCCCCCCCCCHHHHHEEECCCCCCCCCCHHHHHHHCCCCCCCCCHHH
QYVWRLVWEGRRVADRDERFRLYERIERPKTPVKRRPPRKAR
HHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA