| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454429
Identifier: 126454429
GI number: 126454429
Start: 1445517
End: 1446905
Strand: Direct
Name: 126454429
Synonym: BURPS1106A_1490
Alternate gene names: NA
Gene position: 1445517-1446905 (Clockwise)
Preceding gene: 126452808
Following gene: 126454632
Centisome position: 36.24
GC content: 70.48
Gene sequence:
>1389_bases GTGCCGCACCGTCGCGCGCGCGTCGACGCCCGCGCCGCCCCGTATCGCCGACATCGCCGACATCGCCGACATCGCCGACA TCGCCGACTTCGCCGACTTCGCCGACTTCGCCGACTTCGCCGACATCGCCGACATCGCCGACATCGCCGACTTCGCCGAC TTCGCCGACTTCGCCGACTTCGCCGACTTCGCCGACTTCGCCGACTTCGCCGACTTCGCCGACTTCGCCGACTTCGCCGA CTTCGCCGACTTCGCCGACTTCGCCGACTTCGCCGACTTCGCCGACTTCGCCGACTTCGCCGACTTCGCCGACTTCGCCG ACTTCGCCGACTTCGCCGACTTCGCCGACTTCGCCGGGCCGGTCGGACCAGTACGACCGAAGAGGCCGGCAAGTCTTGCA AGGCCGCCGCAACCGGTTGCGGTTCGCCACCGCACCTTCGCGATGGAGGGCGGCTGGCGGCCGATCGCGTTCGCTTGCAC AATAGCCGCTCGATAGCGAGGATGTCGATGCACGAACGACCGCCGATCACGGCCGAGACGACATGGTTTGCCGCGCGGGA CGGCCGGCTGCTGACGGGGACTTTCTATGCGCCGGGCGCGCCGTCGGCGAGCAACGGCCGCAGCGTGCTGGTGAGCGGCG CGCTCGGCGTGCCGCGCGGCTTCTACGAGCGCTATGCGCGTTTTTTGGCGAGCGACGGCTTTACCGTGCTGACCTACGAC TATCGCGGCATCGGCGATTCGCGCAAGCCGCCCGCCGAGGCCGACGGCGCGTCGCTGCGCGACTGGGGCGAAGCCGATCT GCCGGGGGCGCTCGATCATCTGGCCGCGCGCGCGCCGTCGCATCGGTTGCTCGCGGTCGCGCACAGCGTCGGCGGCCAGC TGTTCGGCCTCGCGCACAACAACGGACGCGCGGCGGCGCTGCTGTCGATCTGTTGTCCGAGCGGCTACTGGCGGCTCTGG CCGTGGCCGCACCGGCTATGGCTCGCGCCGCTCTGGTTCTGCGTCGTGCCGGCGCTCGGCGGCGTGCTGTCGCATCTGCC GGTGCGGCGCGCGGGACTGGGCTTCGCCGCCGATCTGCCGGCCGGCGTGATGCGCGAGTGGGCGCGCTGGTGTCGCCACG CCGATTATCTGGTCGACGACGAAGGCCATCCATTGCGCGAGCATTTCCGCGGCTACCGCGGCCGGATTCTCGCATACACG GTCAGCGACGACTGGATGGCGCCGCCCGCCGCGGTGCAGGCGCTGCATCGGTTCTATTCGACCGCGCAGGTCGAGCATCG CGAGATCGCGCCGGATCGGCGGCGGCACGCGATCGGCCACTTCGGCTATTTCCGCGACGACAATCGCGCGCTGTGGCCGC TCGGCGCGGCGTGGTTGCGCGAGCAGTGA
Upstream 100 bases:
>100_bases TCGCGCGCCGCAGCTCGCGCAGTCGTATGCGACGGCATTCTGGCGGCTCTACGGCCTCGCGCGCCGATAACGGGCGGCGG CTGCGGCGTAGGCGCGGGAC
Downstream 100 bases:
>100_bases GCGGCCGCTCGCGCTCGCGCGGGTGCGCGTATCGGGCGAACTCGGCTTACGCAGTCCAGCCGGTGAAAAACTAAACTATG CCGACTGCCGACTGCCGACT
Product: alpha/beta fold family hydrolase
Products: NA
Alternate protein names: Hydrolase; Alpha/Beta Hydrolase-Like Protein; Alpha/Beta Fold Family Hydrolase; Alpha/Beta Hydrolase Fold; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Hydrolase Fold Family Protein; Family; Dehydrogenase; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase Protein
Number of amino acids: Translated: 462; Mature: 461
Protein sequence:
>462_residues MPHRRARVDARAAPYRRHRRHRRHRRHRRLRRLRRLRRLRRHRRHRRHRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRR LRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRAGRTSTTEEAGKSCKAAATGCGSPPHLRDGGRLAADRVRLH NSRSIARMSMHERPPITAETTWFAARDGRLLTGTFYAPGAPSASNGRSVLVSGALGVPRGFYERYARFLASDGFTVLTYD YRGIGDSRKPPAEADGASLRDWGEADLPGALDHLAARAPSHRLLAVAHSVGGQLFGLAHNNGRAAALLSICCPSGYWRLW PWPHRLWLAPLWFCVVPALGGVLSHLPVRRAGLGFAADLPAGVMREWARWCRHADYLVDDEGHPLREHFRGYRGRILAYT VSDDWMAPPAAVQALHRFYSTAQVEHREIAPDRRRHAIGHFGYFRDDNRALWPLGAAWLREQ
Sequences:
>Translated_462_residues MPHRRARVDARAAPYRRHRRHRRHRRHRRLRRLRRLRRLRRHRRHRRHRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRR LRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRAGRTSTTEEAGKSCKAAATGCGSPPHLRDGGRLAADRVRLH NSRSIARMSMHERPPITAETTWFAARDGRLLTGTFYAPGAPSASNGRSVLVSGALGVPRGFYERYARFLASDGFTVLTYD YRGIGDSRKPPAEADGASLRDWGEADLPGALDHLAARAPSHRLLAVAHSVGGQLFGLAHNNGRAAALLSICCPSGYWRLW PWPHRLWLAPLWFCVVPALGGVLSHLPVRRAGLGFAADLPAGVMREWARWCRHADYLVDDEGHPLREHFRGYRGRILAYT VSDDWMAPPAAVQALHRFYSTAQVEHREIAPDRRRHAIGHFGYFRDDNRALWPLGAAWLREQ >Mature_461_residues PHRRARVDARAAPYRRHRRHRRHRRHRRLRRLRRLRRLRRHRRHRRHRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRL RRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRAGRTSTTEEAGKSCKAAATGCGSPPHLRDGGRLAADRVRLHN SRSIARMSMHERPPITAETTWFAARDGRLLTGTFYAPGAPSASNGRSVLVSGALGVPRGFYERYARFLASDGFTVLTYDY RGIGDSRKPPAEADGASLRDWGEADLPGALDHLAARAPSHRLLAVAHSVGGQLFGLAHNNGRAAALLSICCPSGYWRLWP WPHRLWLAPLWFCVVPALGGVLSHLPVRRAGLGFAADLPAGVMREWARWCRHADYLVDDEGHPLREHFRGYRGRILAYTV SDDWMAPPAAVQALHRFYSTAQVEHREIAPDRRRHAIGHFGYFRDDNRALWPLGAAWLREQ
Specific function: Unknown
COG id: COG4757
COG function: function code R; Predicted alpha/beta hydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54453; Mature: 54322
Theoretical pI: Translated: 12.57; Mature: 12.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPHRRARVDARAAPYRRHRRHRRHRRHRRLRRLRRLRRLRRHRRHRRHRRLRRLRRLRRL CCCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRTSTTEEAGKSCKAAATGCGSPPHLRDGGRLAADRVRLHNSRSIARMSMHERPPITAET CCCCCHHHHCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCC TWFAARDGRLLTGTFYAPGAPSASNGRSVLVSGALGVPRGFYERYARFLASDGFTVLTYD CEEEECCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEE YRGIGDSRKPPAEADGASLRDWGEADLPGALDHLAARAPSHRLLAVAHSVGGQLFGLAHN CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEC NGRAAALLSICCPSGYWRLWPWPHRLWLAPLWFCVVPALGGVLSHLPVRRAGLGFAADLP CCCHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHCCC AGVMREWARWCRHADYLVDDEGHPLREHFRGYRGRILAYTVSDDWMAPPAAVQALHRFYS HHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH TAQVEHREIAPDRRRHAIGHFGYFRDDNRALWPLGAAWLREQ HHHHHHHHCCCHHHHHHHHHCCEEECCCCEECCCCHHHHCCC >Mature Secondary Structure PHRRARVDARAAPYRRHRRHRRHRRHRRLRRLRRLRRLRRHRRHRRHRRLRRLRRLRRL CCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRLRRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRTSTTEEAGKSCKAAATGCGSPPHLRDGGRLAADRVRLHNSRSIARMSMHERPPITAET CCCCCHHHHCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCC TWFAARDGRLLTGTFYAPGAPSASNGRSVLVSGALGVPRGFYERYARFLASDGFTVLTYD CEEEECCCEEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEE YRGIGDSRKPPAEADGASLRDWGEADLPGALDHLAARAPSHRLLAVAHSVGGQLFGLAHN CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHCCCEEEEEEC NGRAAALLSICCPSGYWRLWPWPHRLWLAPLWFCVVPALGGVLSHLPVRRAGLGFAADLP CCCHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCHHCCC AGVMREWARWCRHADYLVDDEGHPLREHFRGYRGRILAYTVSDDWMAPPAAVQALHRFYS HHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH TAQVEHREIAPDRRRHAIGHFGYFRDDNRALWPLGAAWLREQ HHHHHHHHCCCHHHHHHHHHCCEEECCCCEECCCCHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA