| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is blh [H]
Identifier: 126454369
GI number: 126454369
Start: 2157352
End: 2158254
Strand: Direct
Name: blh [H]
Synonym: BURPS1106A_2172
Alternate gene names: 126454369
Gene position: 2157352-2158254 (Clockwise)
Preceding gene: 126453059
Following gene: 126454829
Centisome position: 54.09
GC content: 69.55
Gene sequence:
>903_bases GTGACAACAGCGTCCACGATGACGGTCGAAGGCTTTTTCGACCCGGCGACATGCACGATCAGCTATTTGCTGTTCGATTC CGGCAGCGGCGAATGCGCGCTGATCGACAGCGTGCTCGACTACGACCCGAAATCCGGCCGCACGCGCACCGCGAGCGCGG ACCAGTTGATCGCGCGCGTCGCGGCGCTCGGCGCGCGCGTGCGCTGGCTGCTCGAGACGCACGTGCACGCCGACCATCTG TCGGCCGCGCCGTACCTGAAAACGCGGGTCGGCGGCGAGATCGCGATCGGCCGCCACGTGACGCGCGTGCAGGACGTGTT CGGCAAGCTGTTCAACGCAGGCCCCGCGTTCGCGCACGACGGCAGCCAGTTCGACCGCCTGCTCGACGACGGCGACACGC TCGCGCTCGGCGCGCTCTCGATCCGCGCGATGCATACGCCGGGCCACACGCCGGCGTGCATGACCTACGTCGTCACCGAA GCGCATGCGGCGCACGACGCGCGCGACGCGGCCGCGTTCGTCGGCGATACGCTGTTCATGCCCGACTACGGCACCGCGCG CTGCGACTTCCCCGGCGGCGACGCGCGCTCGCTGTACCGGTCGATCCGCAAGGTGCTGAGCCTGCCGCCCGCGACGCGCC TGTACATGTGCCACGACTATCAGCCGAACGGCCGCGCGATCCAGTACGCGAGCACCGTCGCCGACGAGTTGCGCGAGAAC GTGCACATCCGCGAAGGCGTCACCGAGGACGATTTCGTCGCGATGCGCACCGCGCGCGACGCGACGCTCGACATGCCGGT GCTGATGCTGCCCTCGGTGCAGGTCAACATGCGCGCGGGCCGCCTGCCCGAGCCCGAGGACAACGGCGTGCGCTACCTGA AGATCCCGCTCGACGCGATCTGA
Upstream 100 bases:
>100_bases AATCAAGTACCTGTGCTCGCCGATCGGCAATGCTGTCAACTTGGCACGGTTCTTGTTCGAATGAACGCCATCTCGACGAA TGGGCTCCAGGAGAAACCTC
Downstream 100 bases:
>100_bases GCCCGCGGCCCGCCTTCCCCAACGACGCACGACATACGACCACGCCCATCATGGAAATCCGCAAGCTGACCGACACGCTA TCGGTCTCCCCCCAACTCGT
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 300; Mature: 299
Protein sequence:
>300_residues MTTASTMTVEGFFDPATCTISYLLFDSGSGECALIDSVLDYDPKSGRTRTASADQLIARVAALGARVRWLLETHVHADHL SAAPYLKTRVGGEIAIGRHVTRVQDVFGKLFNAGPAFAHDGSQFDRLLDDGDTLALGALSIRAMHTPGHTPACMTYVVTE AHAAHDARDAAAFVGDTLFMPDYGTARCDFPGGDARSLYRSIRKVLSLPPATRLYMCHDYQPNGRAIQYASTVADELREN VHIREGVTEDDFVAMRTARDATLDMPVLMLPSVQVNMRAGRLPEPEDNGVRYLKIPLDAI
Sequences:
>Translated_300_residues MTTASTMTVEGFFDPATCTISYLLFDSGSGECALIDSVLDYDPKSGRTRTASADQLIARVAALGARVRWLLETHVHADHL SAAPYLKTRVGGEIAIGRHVTRVQDVFGKLFNAGPAFAHDGSQFDRLLDDGDTLALGALSIRAMHTPGHTPACMTYVVTE AHAAHDARDAAAFVGDTLFMPDYGTARCDFPGGDARSLYRSIRKVLSLPPATRLYMCHDYQPNGRAIQYASTVADELREN VHIREGVTEDDFVAMRTARDATLDMPVLMLPSVQVNMRAGRLPEPEDNGVRYLKIPLDAI >Mature_299_residues TTASTMTVEGFFDPATCTISYLLFDSGSGECALIDSVLDYDPKSGRTRTASADQLIARVAALGARVRWLLETHVHADHLS AAPYLKTRVGGEIAIGRHVTRVQDVFGKLFNAGPAFAHDGSQFDRLLDDGDTLALGALSIRAMHTPGHTPACMTYVVTEA HAAHDARDAAAFVGDTLFMPDYGTARCDFPGGDARSLYRSIRKVLSLPPATRLYMCHDYQPNGRAIQYASTVADELRENV HIREGVTEDDFVAMRTARDATLDMPVLMLPSVQVNMRAGRLPEPEDNGVRYLKIPLDAI
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=279, Percent_Identity=30.1075268817204, Blast_Score=110, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17538952, Length=266, Percent_Identity=29.6992481203008, Blast_Score=88, Evalue=6e-18, Organism=Drosophila melanogaster, GI221330176, Length=277, Percent_Identity=29.2418772563177, Blast_Score=109, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 32684; Mature: 32553
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTASTMTVEGFFDPATCTISYLLFDSGSGECALIDSVLDYDPKSGRTRTASADQLIARV CCCCCEEEEECCCCCHHEEEEEEEEECCCCCEEEEEHHHCCCCCCCCCCCCCHHHHHHHH AALGARVRWLLETHVHADHLSAAPYLKTRVGGEIAIGRHVTRVQDVFGKLFNAGPAFAHD HHHHHHHHHHHHHHCCHHHHCCCCHHHHHCCCEEEECHHHHHHHHHHHHHHCCCCCCCCC GSQFDRLLDDGDTLALGALSIRAMHTPGHTPACMTYVVTEAHAAHDARDAAAFVGDTLFM CHHHHHHHCCCCEEEEEEEEEEEEECCCCCCHHHHEEHHHHHHHHHHHHHHHHHCCEEEC PDYGTARCDFPGGDARSLYRSIRKVLSLPPATRLYMCHDYQPNGRAIQYASTVADELREN CCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHC VHIREGVTEDDFVAMRTARDATLDMPVLMLPSVQVNMRAGRLPEPEDNGVRYLKIPLDAI CCHHCCCCCCHHEEEECCCCCCCCCCEEECCCEEEEECCCCCCCCCCCCEEEEEEECCCC >Mature Secondary Structure TTASTMTVEGFFDPATCTISYLLFDSGSGECALIDSVLDYDPKSGRTRTASADQLIARV CCCCEEEEECCCCCHHEEEEEEEEECCCCCEEEEEHHHCCCCCCCCCCCCCHHHHHHHH AALGARVRWLLETHVHADHLSAAPYLKTRVGGEIAIGRHVTRVQDVFGKLFNAGPAFAHD HHHHHHHHHHHHHHCCHHHHCCCCHHHHHCCCEEEECHHHHHHHHHHHHHHCCCCCCCCC GSQFDRLLDDGDTLALGALSIRAMHTPGHTPACMTYVVTEAHAAHDARDAAAFVGDTLFM CHHHHHHHCCCCEEEEEEEEEEEEECCCCCCHHHHEEHHHHHHHHHHHHHHHHHCCEEEC PDYGTARCDFPGGDARSLYRSIRKVLSLPPATRLYMCHDYQPNGRAIQYASTVADELREN CCCCCEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCEEEHHHHHHHHHHHC VHIREGVTEDDFVAMRTARDATLDMPVLMLPSVQVNMRAGRLPEPEDNGVRYLKIPLDAI CCHHCCCCCCHHEEEECCCCCCCCCCEEECCCEEEEECCCCCCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10910347 [H]