| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is yghZ [H]
Identifier: 126454356
GI number: 126454356
Start: 202592
End: 203731
Strand: Direct
Name: yghZ [H]
Synonym: BURPS1106A_0216
Alternate gene names: 126454356
Gene position: 202592-203731 (Clockwise)
Preceding gene: 126454571
Following gene: 126453733
Centisome position: 5.08
GC content: 65.61
Gene sequence:
>1140_bases TTGCTGCACGATTCGCGACGGTTGGCTAACATGGCCCGCTGGGGTACGTCCGGCCGGAAGGATCCGGCCTCGTTCAACGT CTCGACGGGAATTCAGATGGCCTACGAAGCAGCTTCAGAACGCTATGCGGACATGCAGTATCGCGTGAGCGGCAAATCCG GGCTCAAATTGCCGGCGCTTTCGCTCGGCTTGTGGCACAACTTCGGCGACACGACGCCGATCTCGACGCAGCGCGAGATC CTGCGCACCGCATTCGATCTCGGCATCACGCACTTCGATCTCGCGAACAACTACGGGCCGCCGTACGGCAGCGCCGAAAC GAACTTCGGCCGGCTGCTGCGCGAGGATTTCAAGCCGTATCGCGACGAGCTGCTGATTTCGACGAAAGCCGGCTGGGACA TGTGGCCCGGCCCGTACGGCAGCGGCGGCGGCTCGCGCAAGTACGTGCTCGCGAGCCTCGACCAGAGCTTGCGGCGCATG GGGCTCGACTATGTCGACATCTTCTATTCGCACCGCTTCGACGCGCACACGCCGCTCGAGGAAACCGCGAGCGCGCTCGC GAGCGCCGTGCAGCAGGGCAAGGCGCTCTACGTCGGGGTCTCGTCGTATTCGGCGGCGAGCACGCGCGAGATCGCGAAGC TGCTCGCCGAATACAAGGTGCCGCTGCTGATCCACCAGCCCGCGTACAACATGCTCAACCGCTGGATCGAGCGCGAGCTG CTCGACGCGCTCGACGAGACGGGCTCGGGCTGCATCGCGTTCACGCCGCTCGCGCAGGGGCTTCTGACCTCGAAGTATCT GAACGGCGTGCCGGCGGATGCGCGGATCAACAAGCCGGGCGGCGGATCGCTGAAGGAAGCTCACCTGAGCGCGGAGAACC TCGAGCACGTGCGCAAGCTGAACGAGATCGCGCAGCGGCGCGGCCAGAGCCTCGCGCAGATGGCGCTTGCCTGGGTGCTG CGCGATTCGCGCGTCACGTCCGCGTTGATCGGTGCGAGCCGCGCGGAGCAGGTGCGCGAGAACGTCGCGGCGCTCGCCCA TCTCGCGTTCAGCGACGACGAGATCGCCGAGATCGACCGCTATGCGACCGAAGGCGGGATCAATCTGTGGGAAAAGCCGT CCACCGATCAGGCGATCTGA
Upstream 100 bases:
>100_bases CAACGGAAATCGCTCGAGTCATGAAGATCCTCGCTGAAACGGATGATGAAGACGCCGCAGTGTAGGGGAGCGCCGCGGCG GCGTCCATCGCGGCGCGGCG
Downstream 100 bases:
>100_bases TCGGTAGCCGTCCTGACGATGCGCGCGCCGCCCGCTCGACGCGCCGAAGGCGGCGCGCCCGGATGCGCGCGCTGCGGGCG CGGCGGCTAGATCAGCGCGG
Product: aldo/keto reductase family oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 379; Mature: 379
Protein sequence:
>379_residues MLHDSRRLANMARWGTSGRKDPASFNVSTGIQMAYEAASERYADMQYRVSGKSGLKLPALSLGLWHNFGDTTPISTQREI LRTAFDLGITHFDLANNYGPPYGSAETNFGRLLREDFKPYRDELLISTKAGWDMWPGPYGSGGGSRKYVLASLDQSLRRM GLDYVDIFYSHRFDAHTPLEETASALASAVQQGKALYVGVSSYSAASTREIAKLLAEYKVPLLIHQPAYNMLNRWIEREL LDALDETGSGCIAFTPLAQGLLTSKYLNGVPADARINKPGGGSLKEAHLSAENLEHVRKLNEIAQRRGQSLAQMALAWVL RDSRVTSALIGASRAEQVRENVAALAHLAFSDDEIAEIDRYATEGGINLWEKPSTDQAI
Sequences:
>Translated_379_residues MLHDSRRLANMARWGTSGRKDPASFNVSTGIQMAYEAASERYADMQYRVSGKSGLKLPALSLGLWHNFGDTTPISTQREI LRTAFDLGITHFDLANNYGPPYGSAETNFGRLLREDFKPYRDELLISTKAGWDMWPGPYGSGGGSRKYVLASLDQSLRRM GLDYVDIFYSHRFDAHTPLEETASALASAVQQGKALYVGVSSYSAASTREIAKLLAEYKVPLLIHQPAYNMLNRWIEREL LDALDETGSGCIAFTPLAQGLLTSKYLNGVPADARINKPGGGSLKEAHLSAENLEHVRKLNEIAQRRGQSLAQMALAWVL RDSRVTSALIGASRAEQVRENVAALAHLAFSDDEIAEIDRYATEGGINLWEKPSTDQAI >Mature_379_residues MLHDSRRLANMARWGTSGRKDPASFNVSTGIQMAYEAASERYADMQYRVSGKSGLKLPALSLGLWHNFGDTTPISTQREI LRTAFDLGITHFDLANNYGPPYGSAETNFGRLLREDFKPYRDELLISTKAGWDMWPGPYGSGGGSRKYVLASLDQSLRRM GLDYVDIFYSHRFDAHTPLEETASALASAVQQGKALYVGVSSYSAASTREIAKLLAEYKVPLLIHQPAYNMLNRWIEREL LDALDETGSGCIAFTPLAQGLLTSKYLNGVPADARINKPGGGSLKEAHLSAENLEHVRKLNEIAQRRGQSLAQMALAWVL RDSRVTSALIGASRAEQVRENVAALAHLAFSDDEIAEIDRYATEGGINLWEKPSTDQAI
Specific function: Unknown
COG id: COG0667
COG function: function code C; Predicted oxidoreductases (related to aryl-alcohol dehydrogenases)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI27436969, Length=322, Percent_Identity=36.0248447204969, Blast_Score=181, Evalue=7e-46, Organism=Homo sapiens, GI4504825, Length=320, Percent_Identity=35.9375, Blast_Score=180, Evalue=2e-45, Organism=Homo sapiens, GI27436964, Length=335, Percent_Identity=32.8358208955224, Blast_Score=175, Evalue=7e-44, Organism=Homo sapiens, GI27436962, Length=322, Percent_Identity=34.1614906832298, Blast_Score=172, Evalue=3e-43, Organism=Homo sapiens, GI27436966, Length=322, Percent_Identity=33.8509316770186, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI27436971, Length=333, Percent_Identity=33.9339339339339, Blast_Score=166, Evalue=3e-41, Organism=Homo sapiens, GI41152114, Length=210, Percent_Identity=32.8571428571429, Blast_Score=83, Evalue=4e-16, Organism=Homo sapiens, GI41327764, Length=212, Percent_Identity=30.6603773584906, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI223718702, Length=304, Percent_Identity=29.2763157894737, Blast_Score=80, Evalue=2e-15, Organism=Escherichia coli, GI1789375, Length=345, Percent_Identity=67.8260869565217, Blast_Score=484, Evalue=1e-138, Organism=Escherichia coli, GI87081735, Length=325, Percent_Identity=35.3846153846154, Blast_Score=154, Evalue=1e-38, Organism=Escherichia coli, GI1788070, Length=285, Percent_Identity=30.8771929824561, Blast_Score=106, Evalue=3e-24, Organism=Escherichia coli, GI1789199, Length=348, Percent_Identity=30.1724137931034, Blast_Score=102, Evalue=5e-23, Organism=Escherichia coli, GI1788081, Length=317, Percent_Identity=27.4447949526814, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI1787674, Length=291, Percent_Identity=27.1477663230241, Blast_Score=78, Evalue=1e-15, Organism=Saccharomyces cerevisiae, GI6325169, Length=338, Percent_Identity=26.9230769230769, Blast_Score=100, Evalue=4e-22, Organism=Saccharomyces cerevisiae, GI6323998, Length=316, Percent_Identity=26.2658227848101, Blast_Score=90, Evalue=5e-19, Organism=Saccharomyces cerevisiae, GI6319958, Length=279, Percent_Identity=27.5985663082437, Blast_Score=90, Evalue=7e-19, Organism=Saccharomyces cerevisiae, GI6322615, Length=238, Percent_Identity=28.1512605042017, Blast_Score=88, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6319951, Length=279, Percent_Identity=26.8817204301075, Blast_Score=80, Evalue=5e-16, Organism=Drosophila melanogaster, GI24640980, Length=372, Percent_Identity=26.3440860215054, Blast_Score=109, Evalue=3e-24, Organism=Drosophila melanogaster, GI45549126, Length=341, Percent_Identity=26.9794721407625, Blast_Score=108, Evalue=7e-24, Organism=Drosophila melanogaster, GI24646159, Length=318, Percent_Identity=26.1006289308176, Blast_Score=75, Evalue=9e-14, Organism=Drosophila melanogaster, GI24646155, Length=340, Percent_Identity=28.2352941176471, Blast_Score=73, Evalue=4e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001395 - InterPro: IPR005399 - InterPro: IPR023210 [H]
Pfam domain/function: PF00248 Aldo_ket_red [H]
EC number: NA
Molecular weight: Translated: 41773; Mature: 41773
Theoretical pI: Translated: 6.81; Mature: 6.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLHDSRRLANMARWGTSGRKDPASFNVSTGIQMAYEAASERYADMQYRVSGKSGLKLPAL CCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHH SLGLWHNFGDTTPISTQREILRTAFDLGITHFDLANNYGPPYGSAETNFGRLLREDFKPY HHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHEEHHCCCCCCCCCCCCHHHHHHHHHCCHH RDELLISTKAGWDMWPGPYGSGGGSRKYVLASLDQSLRRMGLDYVDIFYSHRFDAHTPLE HHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHH ETASALASAVQQGKALYVGVSSYSAASTREIAKLLAEYKVPLLIHQPAYNMLNRWIEREL HHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHH LDALDETGSGCIAFTPLAQGLLTSKYLNGVPADARINKPGGGSLKEAHLSAENLEHVRKL HHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHCHHHHHHHHHH NEIAQRRGQSLAQMALAWVLRDSRVTSALIGASRAEQVRENVAALAHLAFSDDEIAEIDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH YATEGGINLWEKPSTDQAI HHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MLHDSRRLANMARWGTSGRKDPASFNVSTGIQMAYEAASERYADMQYRVSGKSGLKLPAL CCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCHH SLGLWHNFGDTTPISTQREILRTAFDLGITHFDLANNYGPPYGSAETNFGRLLREDFKPY HHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHEEHHCCCCCCCCCCCCHHHHHHHHHCCHH RDELLISTKAGWDMWPGPYGSGGGSRKYVLASLDQSLRRMGLDYVDIFYSHRFDAHTPLE HHHEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCHH ETASALASAVQQGKALYVGVSSYSAASTREIAKLLAEYKVPLLIHQPAYNMLNRWIEREL HHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHH LDALDETGSGCIAFTPLAQGLLTSKYLNGVPADARINKPGGGSLKEAHLSAENLEHVRKL HHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHCHHHHHHHHHH NEIAQRRGQSLAQMALAWVLRDSRVTSALIGASRAEQVRENVAALAHLAFSDDEIAEIDR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH YATEGGINLWEKPSTDQAI HHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]