| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is cutC [H]
Identifier: 126454354
GI number: 126454354
Start: 371864
End: 372577
Strand: Direct
Name: cutC [H]
Synonym: BURPS1106A_0408
Alternate gene names: 126454354
Gene position: 371864-372577 (Clockwise)
Preceding gene: 126453137
Following gene: 126452635
Centisome position: 9.32
GC content: 73.11
Gene sequence:
>714_bases ATGCCAGCTTCCTCGATCCTTCTCGAAGTCATCGCGACGACGATCGGCGACGCGAGAGCCGCCGCGCGCGCGGGGGCCGA TCGCATCGAGCTCGTGACCGCGATCAGCGAGGGCGGCCTGACGCCGAGCGTCGGCGTGATCGAAGCCGTCGTCGCCGCGG TGCCGATTCCCGTCAACGTGATCGTGCGCCCGCACAGCCGCTCGTTCAGTTACGACGCGAGCGAACTCGCGGCGATCGCG CGCGACGTGCGCGCGGCCGTCGCGGCGGGCGCGAACGGCATCGTGTTCGGGATGCTCGACGCGCACGGCGACATCGATCT CGACGCGTTGCGGCGCATCGCCGACGCGGCCGACGGGCGCGATCTCACGTTCCATCGCGCGTTCGACGTCGCGCGCGATC TGAACGCCGCATTCGATACGTTGCTGCGCGTGCCGTCCGTCACGTCGGTGCTGACCTCGGGCGGACATCCGTCGGTGCTC GACGCGCGCGACGTCGTCGCGCGGATGGTGCGGCGCGCCGCGGGCGCGGCGTGCACGGTGCTCGCGGGCGCGGGGCTCAC CGTCGATGCGCTCGGCGATTTCGTGCGCGCCACCGGCGTGCGGGCCGTGCATTTCGGCTCGGGCGTGCGCGAGCGTGGCG AGGTGCTCGCGCCGATCGACGAGCGGCTCGTCGCGAAGGCGCGCGCGGCGCTCGATGCGGCGACGCGGGGGTAG
Upstream 100 bases:
>100_bases GCCGCACGGCCCCCTTCGGCCGTCGGTGCTTCCGCCCTAGCCGCGCGCTCGCGCCGTCGGTTACGATGCTGGCTGGTTCA ACCCGATCCGGACCGCTTCC
Downstream 100 bases:
>100_bases CGCCCCGACTGCGCCGCGGTTGCGCGCCGCGGCGTGGCCGAAGCGGTTGCCGGCGAGTGCCGCGCCGCGCATCGCGCGAA AAAGCCGGGACATCGCCCGG
Product: cutC family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MPASSILLEVIATTIGDARAAARAGADRIELVTAISEGGLTPSVGVIEAVVAAVPIPVNVIVRPHSRSFSYDASELAAIA RDVRAAVAAGANGIVFGMLDAHGDIDLDALRRIADAADGRDLTFHRAFDVARDLNAAFDTLLRVPSVTSVLTSGGHPSVL DARDVVARMVRRAAGAACTVLAGAGLTVDALGDFVRATGVRAVHFGSGVRERGEVLAPIDERLVAKARAALDAATRG
Sequences:
>Translated_237_residues MPASSILLEVIATTIGDARAAARAGADRIELVTAISEGGLTPSVGVIEAVVAAVPIPVNVIVRPHSRSFSYDASELAAIA RDVRAAVAAGANGIVFGMLDAHGDIDLDALRRIADAADGRDLTFHRAFDVARDLNAAFDTLLRVPSVTSVLTSGGHPSVL DARDVVARMVRRAAGAACTVLAGAGLTVDALGDFVRATGVRAVHFGSGVRERGEVLAPIDERLVAKARAALDAATRG >Mature_236_residues PASSILLEVIATTIGDARAAARAGADRIELVTAISEGGLTPSVGVIEAVVAAVPIPVNVIVRPHSRSFSYDASELAAIAR DVRAAVAAGANGIVFGMLDAHGDIDLDALRRIADAADGRDLTFHRAFDVARDLNAAFDTLLRVPSVTSVLTSGGHPSVLD ARDVVARMVRRAAGAACTVLAGAGLTVDALGDFVRATGVRAVHFGSGVRERGEVLAPIDERLVAKARAALDAATRG
Specific function: Involved in copper homeostasis [H]
COG id: COG3142
COG function: function code P; Uncharacterized protein involved in copper resistance
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CutC family [H]
Homologues:
Organism=Homo sapiens, GI148596990, Length=202, Percent_Identity=38.1188118811881, Blast_Score=129, Evalue=2e-30, Organism=Escherichia coli, GI87081995, Length=205, Percent_Identity=37.5609756097561, Blast_Score=120, Evalue=9e-29, Organism=Caenorhabditis elegans, GI17556905, Length=219, Percent_Identity=33.7899543378995, Blast_Score=119, Evalue=2e-27, Organism=Drosophila melanogaster, GI21355415, Length=227, Percent_Identity=32.5991189427313, Blast_Score=109, Evalue=2e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005627 [H]
Pfam domain/function: PF03932 CutC [H]
EC number: NA
Molecular weight: Translated: 24289; Mature: 24158
Theoretical pI: Translated: 6.36; Mature: 6.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPASSILLEVIATTIGDARAAARAGADRIELVTAISEGGLTPSVGVIEAVVAAVPIPVNV CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEE IVRPHSRSFSYDASELAAIARDVRAAVAAGANGIVFGMLDAHGDIDLDALRRIADAADGR EECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCC DLTFHRAFDVARDLNAAFDTLLRVPSVTSVLTSGGHPSVLDARDVVARMVRRAAGAACTV CEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEE LAGAGLTVDALGDFVRATGVRAVHFGSGVRERGEVLAPIDERLVAKARAALDAATRG HHCCCCCHHHHHHHHHHCCCEEEECCCCCHHCCCEECCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure PASSILLEVIATTIGDARAAARAGADRIELVTAISEGGLTPSVGVIEAVVAAVPIPVNV CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCEEE IVRPHSRSFSYDASELAAIARDVRAAVAAGANGIVFGMLDAHGDIDLDALRRIADAADGR EECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCC DLTFHRAFDVARDLNAAFDTLLRVPSVTSVLTSGGHPSVLDARDVVARMVRRAAGAACTV CEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCEEE LAGAGLTVDALGDFVRATGVRAVHFGSGVRERGEVLAPIDERLVAKARAALDAATRG HHCCCCCHHHHHHHHHHCCCEEEECCCCCHHCCCEECCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA