| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454340
Identifier: 126454340
GI number: 126454340
Start: 3200888
End: 3202411
Strand: Reverse
Name: 126454340
Synonym: BURPS1106A_3285
Alternate gene names: NA
Gene position: 3202411-3200888 (Counterclockwise)
Preceding gene: 126453307
Following gene: 126453898
Centisome position: 80.29
GC content: 54.53
Gene sequence:
>1524_bases ATGAAGAATAAAGTGCGTGTATTGGTTGAACTTCGACCGGCGCTGGACGGGTATTCTGGCATTCCGCAGGAAACACGCTT GTTGTTTCGTACGCTGCTGGGCCTCAAAAAGATGGCGGTTACTGGTTTGCTCCAGCAGGGCGGTCGCGACATTACGGCGA AGATGGTGTATGCCGCGGAGTCGGAACGTCCCGCCGCTCAGATTCGCGCGATGTCCAAAATTGTTGTGTCGTTTACCGAT GACGGCCGCCGGGGAGTCGCCGGAGCAATTTCGCGTGCAATTAGTATCGTAATGCGAGGCATTTCGCTGCGGGCGTCCGT GATCGCCGGTCTTTCCGAAAAGCTTGGGTTTTTCGCCCCGGTAGAATTTGAAGATTTCGTTTGGCGACGTTTCTTCGCGA AAACGCTCCCGGTCGACGACCGCCCCCACGTTCTGGCTGCGCAGTACCGTGTATTGCCGCTTGCGATGGCGACGTTGCAT CGTCTCAAGATCTCGCTGTCGGGGCTGTTGCGGGTCAAACGGTTCAAGAAAATCGAAACCCGAGATTTCGACGTATTTAT TTCGCAGACGCCGTTTCCCGGCGTCTTGTCGAGCAATACCAAGCTCATTGTTCGGTATCATGATGCGATACCGATTTTTC TTCCGCATACGATCAAGGATCGAGCTTTCCATCATGGCGCGCACTATGATGCGCTTGCCCGCAACGTTCGTTCAGGGGCG TACTTCGCTTGTGTCTCGGCTGCCACTAGAAATGATCTCCTGAAGATATTCCCTGAAATCGAGGATCGCGCGGTTGTCAT TCATAATACAGTCTCGCCGATCTATAGTGAAATTGATTCTCCTAAAGAATTAGTCAAGGATATTGTATCTTCCAGGCTGT TTCGGCCGCTTGCGAAGAAATACAAGGCGCTCAGTAGTAGCCATGTCGACGTCTTTACGCGAAGCCGATTGAATGCCGAT CAGCAGGATTTCGAGTACTTGCTCATGGTGTCGACGGTTGAGCCGAGAAAGAATCATACGTCGCTCGTGGCTGCGTGGGA ACTGCTTCGGTCTCGCCACAATGAGGCGTTGAAGCTCGTGCTCGTCGGGGATCTGGGGTGGGACTATGCCGAATTCGTCG ACGCAATAGTGCCGTGGGTCGAGAGGGGGGAATTGTTCCTGCTGAGCAATGTCGCGGCCCCGGATTTGCGCGATCTCTAC AAGCACGCGAAGGTGACGATTTGTCCGAGCTACGCGGAAGGTTTTGATTACTCCGGCGTGGAAGCGATGATGAGCGGTGG TGTCGTTGCTGCATCCGACATCCCGGTGCATCGGGAGGTCTACGAGGACGCCTGTATCTACTTCAACCCTTACTCCGTCG AATCAATTGTCGGTGGAATACGCGAGGCGATCTCGTTGCGCAACGCTTCCGAAACATTCGCCGAGTATCGTCGGTGCGCG AAGCGAATTTCGGCGCGCTACACGGCGGAGGCCATTTCGCCCCGGTGGGATGAGTTTATACAAAGCGTTGGTTCGGCCCC TTGA
Upstream 100 bases:
>100_bases GGAAGTTGTATGAATTTCCGGAAATGGACGAGGCGTATCATTTTTATCGGGAAATGCAGCGCGTATAAGGCGGCAGATCT GCTGGCCAAGAAGGGTCGCA
Downstream 100 bases:
>100_bases GGTTCGAAGAGGTAAACAGCACATGCGCGAGCGCACAGTTGACTATTCGTTTTGCGGCATGGTGCGCAGTCGGGAGCGGC TGGCGCGCCAAATTGTGTTC
Product: glycosyl transferase, group 1 family protein
Products: NA
Alternate protein names: Group 1 Glycosyl Transferase; Glycosyl Transferase; Mannosyltransferase; Mannosyltransferase B; Glycosyl Transferase Group 1 Protein; Glycosyltransferase WbpX; Mannosyltransferase A; Mannosyl Transferase B; Glycosyl Transferase Protein; Glycosyl Transferase Group 1 Family Protein; Bifunctional Glycosyltransferase
Number of amino acids: Translated: 507; Mature: 507
Protein sequence:
>507_residues MKNKVRVLVELRPALDGYSGIPQETRLLFRTLLGLKKMAVTGLLQQGGRDITAKMVYAAESERPAAQIRAMSKIVVSFTD DGRRGVAGAISRAISIVMRGISLRASVIAGLSEKLGFFAPVEFEDFVWRRFFAKTLPVDDRPHVLAAQYRVLPLAMATLH RLKISLSGLLRVKRFKKIETRDFDVFISQTPFPGVLSSNTKLIVRYHDAIPIFLPHTIKDRAFHHGAHYDALARNVRSGA YFACVSAATRNDLLKIFPEIEDRAVVIHNTVSPIYSEIDSPKELVKDIVSSRLFRPLAKKYKALSSSHVDVFTRSRLNAD QQDFEYLLMVSTVEPRKNHTSLVAAWELLRSRHNEALKLVLVGDLGWDYAEFVDAIVPWVERGELFLLSNVAAPDLRDLY KHAKVTICPSYAEGFDYSGVEAMMSGGVVAASDIPVHREVYEDACIYFNPYSVESIVGGIREAISLRNASETFAEYRRCA KRISARYTAEAISPRWDEFIQSVGSAP
Sequences:
>Translated_507_residues MKNKVRVLVELRPALDGYSGIPQETRLLFRTLLGLKKMAVTGLLQQGGRDITAKMVYAAESERPAAQIRAMSKIVVSFTD DGRRGVAGAISRAISIVMRGISLRASVIAGLSEKLGFFAPVEFEDFVWRRFFAKTLPVDDRPHVLAAQYRVLPLAMATLH RLKISLSGLLRVKRFKKIETRDFDVFISQTPFPGVLSSNTKLIVRYHDAIPIFLPHTIKDRAFHHGAHYDALARNVRSGA YFACVSAATRNDLLKIFPEIEDRAVVIHNTVSPIYSEIDSPKELVKDIVSSRLFRPLAKKYKALSSSHVDVFTRSRLNAD QQDFEYLLMVSTVEPRKNHTSLVAAWELLRSRHNEALKLVLVGDLGWDYAEFVDAIVPWVERGELFLLSNVAAPDLRDLY KHAKVTICPSYAEGFDYSGVEAMMSGGVVAASDIPVHREVYEDACIYFNPYSVESIVGGIREAISLRNASETFAEYRRCA KRISARYTAEAISPRWDEFIQSVGSAP >Mature_507_residues MKNKVRVLVELRPALDGYSGIPQETRLLFRTLLGLKKMAVTGLLQQGGRDITAKMVYAAESERPAAQIRAMSKIVVSFTD DGRRGVAGAISRAISIVMRGISLRASVIAGLSEKLGFFAPVEFEDFVWRRFFAKTLPVDDRPHVLAAQYRVLPLAMATLH RLKISLSGLLRVKRFKKIETRDFDVFISQTPFPGVLSSNTKLIVRYHDAIPIFLPHTIKDRAFHHGAHYDALARNVRSGA YFACVSAATRNDLLKIFPEIEDRAVVIHNTVSPIYSEIDSPKELVKDIVSSRLFRPLAKKYKALSSSHVDVFTRSRLNAD QQDFEYLLMVSTVEPRKNHTSLVAAWELLRSRHNEALKLVLVGDLGWDYAEFVDAIVPWVERGELFLLSNVAAPDLRDLY KHAKVTICPSYAEGFDYSGVEAMMSGGVVAASDIPVHREVYEDACIYFNPYSVESIVGGIREAISLRNASETFAEYRRCA KRISARYTAEAISPRWDEFIQSVGSAP
Specific function: Unknown
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56826; Mature: 56826
Theoretical pI: Translated: 9.64; Mature: 9.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNKVRVLVELRPALDGYSGIPQETRLLFRTLLGLKKMAVTGLLQQGGRDITAKMVYAAE CCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECC SERPAAQIRAMSKIVVSFTDDGRRGVAGAISRAISIVMRGISLRASVIAGLSEKLGFFAP CCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VEFEDFVWRRFFAKTLPVDDRPHVLAAQYRVLPLAMATLHRLKISLSGLLRVKRFKKIET CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RDFDVFISQTPFPGVLSSNTKLIVRYHDAIPIFLPHTIKDRAFHHGAHYDALARNVRSGA CCEEEEEECCCCCCCCCCCCEEEEEEECCCCEEECCCHHHHHHHCCCHHHHHHHHHCCCC YFACVSAATRNDLLKIFPEIEDRAVVIHNTVSPIYSEIDSPKELVKDIVSSRLFRPLAKK EEEEEHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH YKALSSSHVDVFTRSRLNADQQDFEYLLMVSTVEPRKNHTSLVAAWELLRSRHNEALKLV HHHHCCCCCHHHHHHHCCCCHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEE LVGDLGWDYAEFVDAIVPWVERGELFLLSNVAAPDLRDLYKHAKVTICPSYAEGFDYSGV EEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCEEEEECCHHCCCCCCCH EAMMSGGVVAASDIPVHREVYEDACIYFNPYSVESIVGGIREAISLRNASETFAEYRRCA HHHHCCCEEEECCCCCHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH KRISARYTAEAISPRWDEFIQSVGSAP HHHHHHHHHHHCCCHHHHHHHHHCCCC >Mature Secondary Structure MKNKVRVLVELRPALDGYSGIPQETRLLFRTLLGLKKMAVTGLLQQGGRDITAKMVYAAE CCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECC SERPAAQIRAMSKIVVSFTDDGRRGVAGAISRAISIVMRGISLRASVIAGLSEKLGFFAP CCCHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC VEFEDFVWRRFFAKTLPVDDRPHVLAAQYRVLPLAMATLHRLKISLSGLLRVKRFKKIET CCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC RDFDVFISQTPFPGVLSSNTKLIVRYHDAIPIFLPHTIKDRAFHHGAHYDALARNVRSGA CCEEEEEECCCCCCCCCCCCEEEEEEECCCCEEECCCHHHHHHHCCCHHHHHHHHHCCCC YFACVSAATRNDLLKIFPEIEDRAVVIHNTVSPIYSEIDSPKELVKDIVSSRLFRPLAKK EEEEEHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH YKALSSSHVDVFTRSRLNADQQDFEYLLMVSTVEPRKNHTSLVAAWELLRSRHNEALKLV HHHHCCCCCHHHHHHHCCCCHHCCEEEEEEEECCCCCCHHHHHHHHHHHHHCCCCEEEEE LVGDLGWDYAEFVDAIVPWVERGELFLLSNVAAPDLRDLYKHAKVTICPSYAEGFDYSGV EEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCEEEEECCHHCCCCCCCH EAMMSGGVVAASDIPVHREVYEDACIYFNPYSVESIVGGIREAISLRNASETFAEYRRCA HHHHCCCEEEECCCCCHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHH KRISARYTAEAISPRWDEFIQSVGSAP HHHHHHHHHHHCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA