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The map label for this gene is nifU [H]

Identifier: 126454334

GI number: 126454334

Start: 2729263

End: 2729754

Strand: Direct

Name: nifU [H]

Synonym: BURPS1106A_2764

Alternate gene names: 126454334

Gene position: 2729263-2729754 (Clockwise)

Preceding gene: 126451779

Following gene: 126454980

Centisome position: 68.43

GC content: 68.09

Gene sequence:

>492_bases
ATGAATCCGATCGAATCCCCCGCCGTCGCCGCCGATGCGCAAAGCACGCTCTACCAGGAGCTCATCGTCGAGCACAAGCG
TGCGCCGCGCCGCTTCGGCAAGCTCGCCGAACCGACGCACGAAGCGCGTGGCCACAATCCGCAATGCGGCGACGATCTGA
AAGTTCAGTTGCGCATCGAAGGCGGCCGCATCGGCGACATCCGCTTCGACGGCCACGGCTGCGCGATCTGCATCGCATCC
GCGTCGATGATGACCGAGGCCGTGATCGGCCGCGACGTCGACGCCGCGCGCGCGCTCCAGCAGCGATTCCGCGCGGTCCT
CACCGGCCAGGCCGAGCACGACGAAGCGTATCTCGGCAAGCTCTCGAGCCTCGTCGCGGTGCGGCACTATCCGAGCCGGA
TCAAATGCGCGCTGCTCGGCTGGCATGCGCTCGCGCACGCGCTCGATACGCGCGTGGCCGCCCCTGGCGAAACGGAGCCG
CACGCATCATGA

Upstream 100 bases:

>100_bases
GCTGCGGGCCGACGACGCGCGCGTCGTTCGCGCTCTACAACACGCACGACGAAGTCGAGCGCCTCGTCGCGGGCGTCGCG
CAAGCACTGAAGGTGTTGAG

Downstream 100 bases:

>100_bases
GACGTTCGCGAGAATCCGTCGTGTTGCGGCGGCCGGTGAAGGTCGAGTGCGTGCCGTCCGGCGCGCCGCTCGAGCTGCCC
GCCGGCACCGTCGCCGAGAT

Product: NifU family SUF system FeS assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MNPIESPAVAADAQSTLYQELIVEHKRAPRRFGKLAEPTHEARGHNPQCGDDLKVQLRIEGGRIGDIRFDGHGCAICIAS
ASMMTEAVIGRDVDAARALQQRFRAVLTGQAEHDEAYLGKLSSLVAVRHYPSRIKCALLGWHALAHALDTRVAAPGETEP
HAS

Sequences:

>Translated_163_residues
MNPIESPAVAADAQSTLYQELIVEHKRAPRRFGKLAEPTHEARGHNPQCGDDLKVQLRIEGGRIGDIRFDGHGCAICIAS
ASMMTEAVIGRDVDAARALQQRFRAVLTGQAEHDEAYLGKLSSLVAVRHYPSRIKCALLGWHALAHALDTRVAAPGETEP
HAS
>Mature_163_residues
MNPIESPAVAADAQSTLYQELIVEHKRAPRRFGKLAEPTHEARGHNPQCGDDLKVQLRIEGGRIGDIRFDGHGCAICIAS
ASMMTEAVIGRDVDAARALQQRFRAVLTGQAEHDEAYLGKLSSLVAVRHYPSRIKCALLGWHALAHALDTRVAAPGETEP
HAS

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins (Potential) [H]

COG id: COG0822

COG function: function code C; NifU homolog involved in Fe-S cluster formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002871
- InterPro:   IPR011341 [H]

Pfam domain/function: PF01592 NifU_N [H]

EC number: NA

Molecular weight: Translated: 17678; Mature: 17678

Theoretical pI: Translated: 7.29; Mature: 7.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNPIESPAVAADAQSTLYQELIVEHKRAPRRFGKLAEPTHEARGHNPQCGDDLKVQLRIE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCEEEEEEC
GGRIGDIRFDGHGCAICIASASMMTEAVIGRDVDAARALQQRFRAVLTGQAEHDEAYLGK
CCEEEEEEECCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
LSSLVAVRHYPSRIKCALLGWHALAHALDTRVAAPGETEPHAS
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MNPIESPAVAADAQSTLYQELIVEHKRAPRRFGKLAEPTHEARGHNPQCGDDLKVQLRIE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCEEEEEEC
GGRIGDIRFDGHGCAICIASASMMTEAVIGRDVDAARALQQRFRAVLTGQAEHDEAYLGK
CCEEEEEEECCCCEEEEEHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHH
LSSLVAVRHYPSRIKCALLGWHALAHALDTRVAAPGETEPHAS
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]