| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454284
Identifier: 126454284
GI number: 126454284
Start: 2525027
End: 2526115
Strand: Reverse
Name: 126454284
Synonym: BURPS1106A_2570
Alternate gene names: NA
Gene position: 2526115-2525027 (Counterclockwise)
Preceding gene: 126453378
Following gene: 126454534
Centisome position: 63.34
GC content: 74.01
Gene sequence:
>1089_bases GTGGTGAGCGGCGCGAGCGGGAGCTCGCCGTCGCCCGATCGGGGCCGTGACGCGATGAGCGCGTCCGCGCCTGCGTCGCG CTCGTTCGAGCGCCGGCCGGTGCGCGTGCTGCGTGTGCTCGCGCGCCGCCACGTCGATTCGACGCGGATGGTCCGGCCGC GGGATTTCGACACGGCGCTCGTCGCGCAGGTGCCGGGCATGTCCGACATCGGCGACGGCGAGCGCTACGTACCGCTGTGC GTCGACTGGCGCGACGCGCGGCTTTTCCTGAGCCGCTGGGACGACGACTGCGCGATGACCGACGTGCCGTTTCTCTACCA GCGTCAACGGCGCACCGCGCGGCAACTGCTCGACGTGCCGTTCGAGCAGTTGGAGGCGCCCGGCCGCGCGGCGCGCATGA CGCCGATCTTCATCTTCTCGGTGGGGCGCTGCGGCTCGACGCTGCTGTCGCGCTTGCTCGCGGCGGTGGGCGAGCAAGCG GTGTCGGAGCCGGACGTGCTCACGAGCGTCGCGCATTTCGACGACGCGGCCGAGCGCGCCGCGGCGCTGCCTGCGCGCGA GCGGATCGTGCAGAGCTGCGTCGCGGCGTTCGAGCCCGCGTGCGGGCCCGCGCCGATCATCAAGCTGCGCGCGCGCTGCA ATCGCGCGGTGGACGTGTTCCTGAACGCGATGCCGCACGCGCGCTACGTGTTCATGTGCCGCAATCGCGACGACTGGGTG CGCTCGAGCTCGCGCGCGTTCGGCGACAGCGGCGAGGCGCTCGCCGAGCTGCTCAAGGCGTCGGTCGAGGCGTTCGACCG GATGCACGCGGCCCGCGTCGATCCGCTGCTCGTCTGGTACGAGGATCTGCTCGCGGATCCGCTCGCGGCGCTACGGCGCA TCCTGCGCGCGCGCGACGATCTGGACGCGCACCGCGCCGCCGTCGAGCGCGCGCTGCGCGCCGACGCGCAGGAAGGCTCG GGCCTGTCGCGCGCGTCGCTCGCGGCGCGCACGGGCGATGCCGGCGCGCTCGCCGCGTTCGACGCGCGCTGGCGCGAGAT CCGGCCGGAGGCGCTGTTGCGTGAGCACGGCTTGGCGCGCCTGCGCTGA
Upstream 100 bases:
>100_bases TGTTCGATTCGGACAAGGGGCCGGTGTTCGGCGAGTACGCGGGCGGCACGAACGGCGGCGAAGGGTTCACCGAAGAGGCG CAGGCGTTGCTGGGGGCGCT
Downstream 100 bases:
>100_bases ACCCTTGTTTCGAACAGGAATGGCGATGAATCTCGACAACCAGGTGCTGGAAAACCGCAAGCGGGTGCTGAAGATGCTGC ACGGCGCCGACGGCGGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MVSGASGSSPSPDRGRDAMSASAPASRSFERRPVRVLRVLARRHVDSTRMVRPRDFDTALVAQVPGMSDIGDGERYVPLC VDWRDARLFLSRWDDDCAMTDVPFLYQRQRRTARQLLDVPFEQLEAPGRAARMTPIFIFSVGRCGSTLLSRLLAAVGEQA VSEPDVLTSVAHFDDAAERAAALPARERIVQSCVAAFEPACGPAPIIKLRARCNRAVDVFLNAMPHARYVFMCRNRDDWV RSSSRAFGDSGEALAELLKASVEAFDRMHAARVDPLLVWYEDLLADPLAALRRILRARDDLDAHRAAVERALRADAQEGS GLSRASLAARTGDAGALAAFDARWREIRPEALLREHGLARLR
Sequences:
>Translated_362_residues MVSGASGSSPSPDRGRDAMSASAPASRSFERRPVRVLRVLARRHVDSTRMVRPRDFDTALVAQVPGMSDIGDGERYVPLC VDWRDARLFLSRWDDDCAMTDVPFLYQRQRRTARQLLDVPFEQLEAPGRAARMTPIFIFSVGRCGSTLLSRLLAAVGEQA VSEPDVLTSVAHFDDAAERAAALPARERIVQSCVAAFEPACGPAPIIKLRARCNRAVDVFLNAMPHARYVFMCRNRDDWV RSSSRAFGDSGEALAELLKASVEAFDRMHAARVDPLLVWYEDLLADPLAALRRILRARDDLDAHRAAVERALRADAQEGS GLSRASLAARTGDAGALAAFDARWREIRPEALLREHGLARLR >Mature_362_residues MVSGASGSSPSPDRGRDAMSASAPASRSFERRPVRVLRVLARRHVDSTRMVRPRDFDTALVAQVPGMSDIGDGERYVPLC VDWRDARLFLSRWDDDCAMTDVPFLYQRQRRTARQLLDVPFEQLEAPGRAARMTPIFIFSVGRCGSTLLSRLLAAVGEQA VSEPDVLTSVAHFDDAAERAAALPARERIVQSCVAAFEPACGPAPIIKLRARCNRAVDVFLNAMPHARYVFMCRNRDDWV RSSSRAFGDSGEALAELLKASVEAFDRMHAARVDPLLVWYEDLLADPLAALRRILRARDDLDAHRAAVERALRADAQEGS GLSRASLAARTGDAGALAAFDARWREIRPEALLREHGLARLR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40030; Mature: 40030
Theoretical pI: Translated: 8.70; Mature: 8.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSGASGSSPSPDRGRDAMSASAPASRSFERRPVRVLRVLARRHVDSTRMVRPRDFDTAL CCCCCCCCCCCCCCCCHHHCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHH VAQVPGMSDIGDGERYVPLCVDWRDARLFLSRWDDDCAMTDVPFLYQRQRRTARQLLDVP HHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC FEQLEAPGRAARMTPIFIFSVGRCGSTLLSRLLAAVGEQAVSEPDVLTSVAHFDDAAERA HHHHCCCCCHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AALPARERIVQSCVAAFEPACGPAPIIKLRARCNRAVDVFLNAMPHARYVFMCRNRDDWV HHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHH RSSSRAFGDSGEALAELLKASVEAFDRMHAARVDPLLVWYEDLLADPLAALRRILRARDD HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC LDAHRAAVERALRADAQEGSGLSRASLAARTGDAGALAAFDARWREIRPEALLREHGLAR HHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHCCHHC LR CC >Mature Secondary Structure MVSGASGSSPSPDRGRDAMSASAPASRSFERRPVRVLRVLARRHVDSTRMVRPRDFDTAL CCCCCCCCCCCCCCCCHHHCCCCCCCCCHHCCHHHHHHHHHHHCCCCCCCCCCCCCCHHH VAQVPGMSDIGDGERYVPLCVDWRDARLFLSRWDDDCAMTDVPFLYQRQRRTARQLLDVP HHHCCCCCCCCCCCCEEEEEECCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCC FEQLEAPGRAARMTPIFIFSVGRCGSTLLSRLLAAVGEQAVSEPDVLTSVAHFDDAAERA HHHHCCCCCHHCCCEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH AALPARERIVQSCVAAFEPACGPAPIIKLRARCNRAVDVFLNAMPHARYVFMCRNRDDWV HHCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHH RSSSRAFGDSGEALAELLKASVEAFDRMHAARVDPLLVWYEDLLADPLAALRRILRARDD HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC LDAHRAAVERALRADAQEGSGLSRASLAARTGDAGALAAFDARWREIRPEALLREHGLAR HHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHCCHHC LR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA