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The map label for this gene is insK [C]

Identifier: 126454182

GI number: 126454182

Start: 3773007

End: 3773840

Strand: Reverse

Name: insK [C]

Synonym: BURPS1106A_3877

Alternate gene names: 126454182

Gene position: 3773840-3773007 (Counterclockwise)

Preceding gene: 126453330

Following gene: 126453835

Centisome position: 94.62

GC content: 61.75

Gene sequence:

>834_bases
GTGTTGGCGATTCGGGAGAAGGTCAACATCTCCGAGCGCCGCGCCTGCCGGCTTGTCGGGCTTTCTCGCAGCGTGCTGCA
TTACGACGCGAAGCCGGACCACGAGAATGAGGTGCTCGCGGCGCGTCTGGTGAAGTTGGCGCACGAACGTCGTCGATTCG
GCTACCGCCGACTGCACGCCCTGGTGGAACGCGAAGGCACGCAGGCCAATCACAAGCGCATCTATCGCCTGTACCGTGAG
GCAGGGCTGGCTGTGCGGCGCCGTCGCAAGCGCCACGGCGTCATGATTGAGCGCGAGCAACTGGCATTGCCGGGCGCACC
CAACGAGGTGTGGTCAATCGATTTCGTGATGGATGCGCTTTCCAACGGCCGGCGCGTGAAGTGCCTGACCGTCGTCGACG
ATTTCACGAAAGAGGCTGTCGACATCGTCGTCGACCATGGCATCTCAGGTTTGTATGTCGCTCGGGCATTGGACCGTGCA
GCTCGCTTCCGTGGCTATCGCAAGGCGGTGCGAACAGACCAGGGACCCGAATTTACGAGCCGCGCGCTTGACCAGTGGGC
GTATGCGAACGGCGTCACGCTGAAGTTGATTCAGGCGGGCAAGCCAACGCAGAATGCGTACATCGAATCGTTCAACGGCA
AGTTCCGCGACGAATGCCTTAACGAGCACTGGTTCACGACGCTCGCGCACGCTCGGGCAGTCATCGCGGCATGGCGTCAG
GACTACAACGAGCAAAGGCCGCACTGCGCACTGAACTACCTTGCGCCGTCAGAGTTTGCGGCGAAACATCGGGCAACCGC
GGACGCTCCTGCCGCTTTCCAGGAGTTGGTTTAA

Upstream 100 bases:

>100_bases
CCCGACTGAAGAAACTGCTGGCCGAAGCAATGCTCGATATGGAAGCGTTGAAGGTTGTCGTCAAGGGAAAGCCCTGAGCC
CGCAAGCCAAACGCGAAGCA

Downstream 100 bases:

>100_bases
AGGGACTTTGCTAGAAGCCCATTGGCCCTATCGAAGGGGGCAGGTCATGACAGCGTGCTGTCGGCCGCTAGAATGTGCCT
ATCCACCTTCATGGATGCAC

Product: A, transposase OrfB

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MLAIREKVNISERRACRLVGLSRSVLHYDAKPDHENEVLAARLVKLAHERRRFGYRRLHALVEREGTQANHKRIYRLYRE
AGLAVRRRRKRHGVMIEREQLALPGAPNEVWSIDFVMDALSNGRRVKCLTVVDDFTKEAVDIVVDHGISGLYVARALDRA
ARFRGYRKAVRTDQGPEFTSRALDQWAYANGVTLKLIQAGKPTQNAYIESFNGKFRDECLNEHWFTTLAHARAVIAAWRQ
DYNEQRPHCALNYLAPSEFAAKHRATADAPAAFQELV

Sequences:

>Translated_277_residues
MLAIREKVNISERRACRLVGLSRSVLHYDAKPDHENEVLAARLVKLAHERRRFGYRRLHALVEREGTQANHKRIYRLYRE
AGLAVRRRRKRHGVMIEREQLALPGAPNEVWSIDFVMDALSNGRRVKCLTVVDDFTKEAVDIVVDHGISGLYVARALDRA
ARFRGYRKAVRTDQGPEFTSRALDQWAYANGVTLKLIQAGKPTQNAYIESFNGKFRDECLNEHWFTTLAHARAVIAAWRQ
DYNEQRPHCALNYLAPSEFAAKHRATADAPAAFQELV
>Mature_277_residues
MLAIREKVNISERRACRLVGLSRSVLHYDAKPDHENEVLAARLVKLAHERRRFGYRRLHALVEREGTQANHKRIYRLYRE
AGLAVRRRRKRHGVMIEREQLALPGAPNEVWSIDFVMDALSNGRRVKCLTVVDDFTKEAVDIVVDHGISGLYVARALDRA
ARFRGYRKAVRTDQGPEFTSRALDQWAYANGVTLKLIQAGKPTQNAYIESFNGKFRDECLNEHWFTTLAHARAVIAAWRQ
DYNEQRPHCALNYLAPSEFAAKHRATADAPAAFQELV

Specific function: Involved in the transposition of the insertion sequence is150 [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1789981, Length=255, Percent_Identity=27.0588235294118, Blast_Score=85, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 31773; Mature: 31773

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAIREKVNISERRACRLVGLSRSVLHYDAKPDHENEVLAARLVKLAHERRRFGYRRLHA
CCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LVEREGTQANHKRIYRLYREAGLAVRRRRKRHGVMIEREQLALPGAPNEVWSIDFVMDAL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCCCCCHHHHHHHHHHH
SNGRRVKCLTVVDDFTKEAVDIVVDHGISGLYVARALDRAARFRGYRKAVRTDQGPEFTS
CCCCEEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
RALDQWAYANGVTLKLIQAGKPTQNAYIESFNGKFRDECLNEHWFTTLAHARAVIAAWRQ
HHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DYNEQRPHCALNYLAPSEFAAKHRATADAPAAFQELV
HHCCCCCCEEEECCCCHHHHHHHCCCCCCHHHHHHCC
>Mature Secondary Structure
MLAIREKVNISERRACRLVGLSRSVLHYDAKPDHENEVLAARLVKLAHERRRFGYRRLHA
CCCCCCCCCCHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LVEREGTQANHKRIYRLYREAGLAVRRRRKRHGVMIEREQLALPGAPNEVWSIDFVMDAL
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHCCCCCCCCCHHHHHHHHHHH
SNGRRVKCLTVVDDFTKEAVDIVVDHGISGLYVARALDRAARFRGYRKAVRTDQGPEFTS
CCCCEEEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH
RALDQWAYANGVTLKLIQAGKPTQNAYIESFNGKFRDECLNEHWFTTLAHARAVIAAWRQ
HHHHHHHHCCCCEEEEEECCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DYNEQRPHCALNYLAPSEFAAKHRATADAPAAFQELV
HHCCCCCCEEEECCCCHHHHHHHCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]