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The map label for this gene is yqgF [C]

Identifier: 126454156

GI number: 126454156

Start: 3069205

End: 3069645

Strand: Reverse

Name: yqgF [C]

Synonym: BURPS1106A_3147

Alternate gene names: 126454156

Gene position: 3069645-3069205 (Counterclockwise)

Preceding gene: 126453877

Following gene: 126452664

Centisome position: 76.96

GC content: 66.21

Gene sequence:

>441_bases
ATGAGCGCGGCGCTTTCGCGCGACGCAACGCTCCTCGCGTTCGATTACGGCGAAAAACGCATCGGCGTGGCGGTCGGCAA
TCTGCTGACGCGCACGGCTCGTGCGCTCGTCATCGTTCGCAATCTGAACCGCGAGCATCGCTTCAAGGCGGTCGGCGAGT
TGATCGCCGAATGGAAGCCTGACGCGCTCGTCGTCGGCCTGCCGCTGCATCCGGACGGCGCGCCGCACGAGATGACGCAG
CGGGCGATGCGCTTCGGCAATCAGCTGAACGGCCGCTTCAACCTGCCGGTGAGCTGGGTCGACGAACGCTATTCGTCGGT
CGAGGCGCGCGCGGGCCTGCGCGCGCGCGGCGACGCGGCGGATCGCGTCGATGCGGAAGCCGCCCGCGTCATCCTTCAAC
AATACCTCGACGGACTGCCCGATCATCATGAGTTCAATTGA

Upstream 100 bases:

>100_bases
CGCGGATCGTGTTCGATACGCCCGCCGAGGAGCGCTTCGAGGCGGCGCTCGGCCTGCTCGGCGTGAGCTCGTCGATGCTT
TCCGGCGAGGCAGGGCACGC

Downstream 100 bases:

>100_bases
CGCCGAGGCGCTTTACCGCGTCCTGCTTGACCAGATTCGCGCGGCCTATGGCGACGCCGCGTTCGCGCAAGCCGGCGGCC
CCGTGCTCGCGGGCATCCAC

Product: Holliday junction resolvase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSAALSRDATLLAFDYGEKRIGVAVGNLLTRTARALVIVRNLNREHRFKAVGELIAEWKPDALVVGLPLHPDGAPHEMTQ
RAMRFGNQLNGRFNLPVSWVDERYSSVEARAGLRARGDAADRVDAEAARVILQQYLDGLPDHHEFN

Sequences:

>Translated_146_residues
MSAALSRDATLLAFDYGEKRIGVAVGNLLTRTARALVIVRNLNREHRFKAVGELIAEWKPDALVVGLPLHPDGAPHEMTQ
RAMRFGNQLNGRFNLPVSWVDERYSSVEARAGLRARGDAADRVDAEAARVILQQYLDGLPDHHEFN
>Mature_145_residues
SAALSRDATLLAFDYGEKRIGVAVGNLLTRTARALVIVRNLNREHRFKAVGELIAEWKPDALVVGLPLHPDGAPHEMTQR
AMRFGNQLNGRFNLPVSWVDERYSSVEARAGLRARGDAADRVDAEAARVILQQYLDGLPDHHEFN

Specific function: Could be a nuclease that resolves Holliday junction intermediates in genetic recombination

COG id: COG0816

COG function: function code L; Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis)

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yqgF HJR family

Homologues:

Organism=Escherichia coli, GI1789318, Length=133, Percent_Identity=42.8571428571429, Blast_Score=110, Evalue=4e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RUVX_BURM7 (A3MMA9)

Other databases:

- EMBL:   CP000548
- RefSeq:   YP_001081395.1
- ProteinModelPortal:   A3MMA9
- SMR:   A3MMA9
- GeneID:   4893518
- GenomeReviews:   CP000548_GR
- KEGG:   bmn:BMA10247_1858
- TIGR:   BMA10247_1858
- HOGENOM:   HBG607919
- OMA:   NEHSSTW
- ProtClustDB:   PRK00109
- BioCyc:   BMAL320389:BMA10247_1858-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00651
- InterPro:   IPR005227
- InterPro:   IPR006641
- InterPro:   IPR012337
- Gene3D:   G3DSA:3.30.420.140
- SMART:   SM00732
- TIGRFAMs:   TIGR00250

Pfam domain/function: PF03652 UPF0081; SSF53098 RNaseH_fold

EC number: NA

Molecular weight: Translated: 16241; Mature: 16109

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAALSRDATLLAFDYGEKRIGVAVGNLLTRTARALVIVRNLNREHRFKAVGELIAEWKP
CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
DALVVGLPLHPDGAPHEMTQRAMRFGNQLNGRFNLPVSWVDERYSSVEARAGLRARGDAA
CEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHCCCCCCCCCC
DRVDAEAARVILQQYLDGLPDHHEFN
HHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SAALSRDATLLAFDYGEKRIGVAVGNLLTRTARALVIVRNLNREHRFKAVGELIAEWKP
CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
DALVVGLPLHPDGAPHEMTQRAMRFGNQLNGRFNLPVSWVDERYSSVEARAGLRARGDAA
CEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHCCCCCCCCCC
DRVDAEAARVILQQYLDGLPDHHEFN
HHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA