| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is apaH [H]
Identifier: 126454155
GI number: 126454155
Start: 3064357
End: 3065205
Strand: Direct
Name: apaH [H]
Synonym: BURPS1106A_3142
Alternate gene names: 126454155
Gene position: 3064357-3065205 (Clockwise)
Preceding gene: 126452284
Following gene: 126454539
Centisome position: 76.83
GC content: 70.67
Gene sequence:
>849_bases ATGACAAATTTCTCCAGCAGCCCGCCGATCGCTTTCGGCGACCTGCAGGGCTGCCACGCCGCCTATCGGCAGCTCTTCGA CACGCTCGCGCCGGCGGCCGACACCCCGCTCTGGTTCGCGGGCGACCTCGTCAACCGCGGCCCGGCCTCGCTCGCGACGC TGCGCGAGATCGTCGCGCTCGGCGAGCGCGCGATCGCGGTGCTCGGCAATCATGATCTGCACCTGCTCGCGGTCGCGGCC GGGATCCGCACGCTGAAGCCGGGCGACACGATCGGCGAGATTCTCGACGCGCCCGACGCCGACGATCTGATCGAATGGGT GCGCCACCGGCCGTTCGCGCACTTCGAGCGCGGCATGCTGATGGTGCACGCGGGCCTGCTGCCGCAATGGGACGCGGCGC TCGCGCTCGAACTCGCCGACGAACTTCAGCGCGCGTTGCGCGCGCCGAACTGGCGCGACACGCTGCGCAGCCTGTACGGC AACGACCCCAATTGTTGGAGCCCGGATCTGAAGCACGCGGACCGGCTGCGAGTCGCATTCAACGCGTTCACGCGCATTCG CTTCTGCACGCCGGAAGGCGCGATGGAGTTTCGGGCGAACGGCGGCCCGGCGGCCGCGCCCGCCGGCTACCTGCCCTGGT TCGACGCGCCCGGACGGAAAACCGCCGACGTGACGGTCGTGTTCGGCCACTGGGCCGCGTTGGGGCTGATGCTGCGCGAG AATCTGGTCGCGCTGGATTCGGGATGCGTGTGGGGCAACCGCCTGTCCGCCGTGCGGCTCGCCGACGATCCGGCCGCGCG CGTGGTCACGCAGGTCGCATGCGAGCGCTGCGGCGCAGCGGACGAATAG
Upstream 100 bases:
>100_bases GAGACCGATGCCAGGCCGGATTTTCTCCGTCGCCGTTCCACTCGGACCGAAGTGCCTTCTTGTGATACCGTGAACTCGGT TTCGTCACGATTGCAAAGGA
Downstream 100 bases:
>100_bases CCGCGCGGATGCCGATGCGGGTGCCGATACGGGCGGCAGGCTTGCCGCCGCCCGTCCCCGCGCACGGTTGAACGCCCCGC ATTCGACCTGCGCATCGCGC
Product: diadenosine tetraphosphatase
Products: NA
Alternate protein names: Ap4A hydrolase; Diadenosine 5',5'''-P1,P4-tetraphosphate pyrophosphohydrolase; Diadenosine tetraphosphatase [H]
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MTNFSSSPPIAFGDLQGCHAAYRQLFDTLAPAADTPLWFAGDLVNRGPASLATLREIVALGERAIAVLGNHDLHLLAVAA GIRTLKPGDTIGEILDAPDADDLIEWVRHRPFAHFERGMLMVHAGLLPQWDAALALELADELQRALRAPNWRDTLRSLYG NDPNCWSPDLKHADRLRVAFNAFTRIRFCTPEGAMEFRANGGPAAAPAGYLPWFDAPGRKTADVTVVFGHWAALGLMLRE NLVALDSGCVWGNRLSAVRLADDPAARVVTQVACERCGAADE
Sequences:
>Translated_282_residues MTNFSSSPPIAFGDLQGCHAAYRQLFDTLAPAADTPLWFAGDLVNRGPASLATLREIVALGERAIAVLGNHDLHLLAVAA GIRTLKPGDTIGEILDAPDADDLIEWVRHRPFAHFERGMLMVHAGLLPQWDAALALELADELQRALRAPNWRDTLRSLYG NDPNCWSPDLKHADRLRVAFNAFTRIRFCTPEGAMEFRANGGPAAAPAGYLPWFDAPGRKTADVTVVFGHWAALGLMLRE NLVALDSGCVWGNRLSAVRLADDPAARVVTQVACERCGAADE >Mature_281_residues TNFSSSPPIAFGDLQGCHAAYRQLFDTLAPAADTPLWFAGDLVNRGPASLATLREIVALGERAIAVLGNHDLHLLAVAAG IRTLKPGDTIGEILDAPDADDLIEWVRHRPFAHFERGMLMVHAGLLPQWDAALALELADELQRALRAPNWRDTLRSLYGN DPNCWSPDLKHADRLRVAFNAFTRIRFCTPEGAMEFRANGGPAAAPAGYLPWFDAPGRKTADVTVVFGHWAALGLMLREN LVALDSGCVWGNRLSAVRLADDPAARVVTQVACERCGAADE
Specific function: Hydrolyzes diadenosine 5',5'''-P1,P4-tetraphosphate to yield ADP [H]
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ap4A hydrolase family [H]
Homologues:
Organism=Escherichia coli, GI1786234, Length=256, Percent_Identity=44.140625, Blast_Score=215, Evalue=2e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004617 - InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: =3.6.1.41 [H]
Molecular weight: Translated: 30610; Mature: 30479
Theoretical pI: Translated: 5.57; Mature: 5.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNFSSSPPIAFGDLQGCHAAYRQLFDTLAPAADTPLWFAGDLVNRGPASLATLREIVAL CCCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCEEECHHHCCCCHHHHHHHHHHHH GERAIAVLGNHDLHLLAVAAGIRTLKPGDTIGEILDAPDADDLIEWVRHRPFAHFERGML CHHHEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHCCCHHHHHCCEE MVHAGLLPQWDAALALELADELQRALRAPNWRDTLRSLYGNDPNCWSPDLKHADRLRVAF EEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH NAFTRIRFCTPEGAMEFRANGGPAAAPAGYLPWFDAPGRKTADVTVVFGHWAALGLMLRE HHHHEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHH NLVALDSGCVWGNRLSAVRLADDPAARVVTQVACERCGAADE HHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure TNFSSSPPIAFGDLQGCHAAYRQLFDTLAPAADTPLWFAGDLVNRGPASLATLREIVAL CCCCCCCCEEECCCHHHHHHHHHHHHHHCCCCCCCCEEECHHHCCCCHHHHHHHHHHHH GERAIAVLGNHDLHLLAVAAGIRTLKPGDTIGEILDAPDADDLIEWVRHRPFAHFERGML CHHHEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHCCCHHHHHCCEE MVHAGLLPQWDAALALELADELQRALRAPNWRDTLRSLYGNDPNCWSPDLKHADRLRVAF EEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHH NAFTRIRFCTPEGAMEFRANGGPAAAPAGYLPWFDAPGRKTADVTVVFGHWAALGLMLRE HHHHEEEEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHHHHH NLVALDSGCVWGNRLSAVRLADDPAARVVTQVACERCGAADE HHHHHCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA