| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is yhjG [H]
Identifier: 126454124
GI number: 126454124
Start: 2174286
End: 2176760
Strand: Reverse
Name: yhjG [H]
Synonym: BURPS1106A_2188
Alternate gene names: 126454124
Gene position: 2176760-2174286 (Counterclockwise)
Preceding gene: 126453786
Following gene: 126455427
Centisome position: 54.58
GC content: 69.94
Gene sequence:
>2475_bases ATGGCGCTCACCCGTACTCTTGGCAAAACGGCGGCGTGGATCGTCGGCATCTTCGCGGTCTTGACCGCGGCGGTCGGCGT GTTCATCTTCACGTTCGACTGGAATCGCGCGAAACCGTGGATCAACGAGCAGGCAAGCGCGTCGATCGGCCGGCCGTTCG AGATCCGCGGCGACATCAAGGTCGGCTGGCGGCGGCCCGACGGCGAGACCGGCTGGCGCGCATGGGTGCCGTGGCCGGTG TTCTCGGCGAGCCGGATCGTGATCGGCAACCCGCCGTGGGCGAAAGCGCCCAATTTCGCGACGCTCGACGAAGCGCGCTT CGAGCTCGCCGTCCTGCCGCTGCTCGCGCACGAGGTCGTGATCCCGACGATCGAGCTCGTCAACCCGGCGCTCGACATCG AGCGCCTCGCCGACGGCCGCAACAACTGGACCTTCGAATTCAAGCAGTCTGCCGGCCCGTCGCCCTGGAAGGTGCAGTTG CGCGACTTCGGCTTCGCGAAGGGCACGGTCGTCTATCGCGACGCGATCACGAAAGCCGATCTGAGCGTCGCGGTCGATAC GCTCGGCCAGCCGATTCCGCTCGGCGACGTGCTCCGGCAGCAGGAGGAGACGTCTCGGGCGGCGTCGGCGCAGCGGGTCG GCAAACGCGGCGCGGCGCAATTGGCCGCCAAGGCGCAAGCCCAGATCGCGTCCGACGCGTCGGCGGCGTCGGCCGCCGGG GCGCCGAACGCGAGCGGCGCTGCCGCGGCGAGCGGCGCGTCGGGCGTGAATGCCGCGGCGTCGGCCGCCAAGGTTTCCGG CAATGACCGGTCACGGGCGGCTCGGGCCACGGCGGGCGCGAGCGCTGCGTCGAAGCCGGCCGCCGCGGCCTCCGGCGGGA GCGCCGCGGTGGTTGCCGCCGGCAAGGCTCCCGCAGCGGGCGCGGGCGGGGCGGTTGCTTCCGCCTCCGCGTCGGCCGCA TCTTCCGCTTCAGCCGTCTCGACGAGCGCGGCCGTTTCGGGCGCGAGCGGCGCAAGCGCGGCCTCCGCCGCCGAGCAGCG GTCGGCCGGCCCGACCTACGCGTTCGGCCTGACCGTGAAGGGCCGCTACAAGGGCGTGCCGATCGACGGCACGGGCAAGG TGGGCGGCGTGCTGTCGCTTCGGGACGCTTCGCGGCCATTCCCGCTGCAGGCCGACGTGAAGGCGGGCGACACGCGCCTC GCGATCGTCGGGACGCTCACCGATCCGGTCCATCTCGCCGCGATCGACCTGCGGCTGTGGCTGCAGGGCTCGAGCATGTC GCACCTGTATCCGCTCACGGGCGTGACCTTGCCCGACACGCCGCCGTACGCGACCGAAGGCCGGCTCATCGGTCGTTTCA AGCGCGCCGCGAGCACGTTCCGTTACGAGAACTTCAACGGCCGCGTCGGCGGCAGCGATCTGCGCGGCACGCTCGTGTAC CAGCAGCGCGCACCGCGGCCGCTCCTGTCCGGCGAGCTCGTGTCGAATCTGCTGCAGTTCTCCGATCTCGCGCCGATCAT CGGCGCGGACACGGCCGCGAGCAAGGCGCGGCGCGGCGACACGACGAAGCAGCCGCCCGGCCGCGTGCTGCCCGTCGAGA CATTCCGCACCGACCGCTGGCGCGCGCTCGACGCCGACGTCAAGTTCACGGGCCGCAAGCTGATCAAGAGCGCCGCGCTG CCGATCAGCGATCTGTACACGCACATCGTGATGACGGACGGCGTGCTGTCGCTCGAGCCGCTGAAGTTCGGCGTCGCGGG CGGCTCGCTCGCGACCACCGCGCATCTCGACGGCAGCGCCGCGCCGCTGAAGGGCCGCTTCTCGGTCGCCGCGCGGCATC TGAAGCTCAAGCAGCTGTTCCCGACGCAGAAGGTCATGCAGTCCGCGCTCGGCGAGATCAACGGCGATGCGGCGCTGTCC GCGACGGGCAATTCGCCCGCCGCGCTCGCGGCGACGTCGAACGGCGAAGTGAAGATGCTGATGACCGATGGCGCGATCAG CCGCCTGTTGATGGAAGCGGCGGGCCTGAACGTCGCCAACGTCCTGTACGAAAAGATGTTCGGCAGCCACGACGTGAAGA TCAATTGCGCGGCCGTCGATTTCGTGGCAACCAACGGCTTGCTCGACACGAAGCTGTTCGCGTTCGATACCGACGACGCG CTCATCAACATCGACGGCCCGATCGATCTGCGCAACGAGTCGATGAACCTGAAGGTCCATCCGCATACGAAGGGATTCCG CGTGTTCTCGCTGCGCTCGCCGCTGTACGTGAAGGGGACGTTCAAGAATCCGGACGTCGGGGTCGACGCGGCCGCGCTCG CGTTGCGCGCGGGCGCGATGGTCGGCCTCGGGCTCGTGAATCCGTTCGCGGCGCTGATTCCGCTGATCGCGCCGAGCAAT AACCGGGACGTGCCGTGCTCGGAGCTCTTCGCGCAGTTGAAGGCGCCGCAGAAGGCCGCGAACGCGCGCAAGTGA
Upstream 100 bases:
>100_bases GCGGGTGGCGCAGCATCGTGCGCCATAATAACTGCCAGCGGCAGCGTCGCGCACGCTGCGCGGCACGGCCGATTCAGGAA GAACAACGACGGAATCTGGC
Downstream 100 bases:
>100_bases CCGGTTCGCGGGCTTGCCGGGCGGTTCGAAAGCGTGATTCGCGGGCTGCGGCGAAGGGCGGGGCCGCCCCCGGGGCGGGA GAGCGGTCCCATCGTTGCCG
Product: AsmA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 824; Mature: 823
Protein sequence:
>824_residues MALTRTLGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRPDGETGWRAWVPWPV FSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIELVNPALDIERLADGRNNWTFEFKQSAGPSPWKVQL RDFGFAKGTVVYRDAITKADLSVAVDTLGQPIPLGDVLRQQEETSRAASAQRVGKRGAAQLAAKAQAQIASDASAASAAG APNASGAAAASGASGVNAAASAAKVSGNDRSRAARATAGASAASKPAAAASGGSAAVVAAGKAPAAGAGGAVASASASAA SSASAVSTSAAVSGASGASAASAAEQRSAGPTYAFGLTVKGRYKGVPIDGTGKVGGVLSLRDASRPFPLQADVKAGDTRL AIVGTLTDPVHLAAIDLRLWLQGSSMSHLYPLTGVTLPDTPPYATEGRLIGRFKRAASTFRYENFNGRVGGSDLRGTLVY QQRAPRPLLSGELVSNLLQFSDLAPIIGADTAASKARRGDTTKQPPGRVLPVETFRTDRWRALDADVKFTGRKLIKSAAL PISDLYTHIVMTDGVLSLEPLKFGVAGGSLATTAHLDGSAAPLKGRFSVAARHLKLKQLFPTQKVMQSALGEINGDAALS ATGNSPAALAATSNGEVKMLMTDGAISRLLMEAAGLNVANVLYEKMFGSHDVKINCAAVDFVATNGLLDTKLFAFDTDDA LINIDGPIDLRNESMNLKVHPHTKGFRVFSLRSPLYVKGTFKNPDVGVDAAALALRAGAMVGLGLVNPFAALIPLIAPSN NRDVPCSELFAQLKAPQKAANARK
Sequences:
>Translated_824_residues MALTRTLGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRPDGETGWRAWVPWPV FSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIELVNPALDIERLADGRNNWTFEFKQSAGPSPWKVQL RDFGFAKGTVVYRDAITKADLSVAVDTLGQPIPLGDVLRQQEETSRAASAQRVGKRGAAQLAAKAQAQIASDASAASAAG APNASGAAAASGASGVNAAASAAKVSGNDRSRAARATAGASAASKPAAAASGGSAAVVAAGKAPAAGAGGAVASASASAA SSASAVSTSAAVSGASGASAASAAEQRSAGPTYAFGLTVKGRYKGVPIDGTGKVGGVLSLRDASRPFPLQADVKAGDTRL AIVGTLTDPVHLAAIDLRLWLQGSSMSHLYPLTGVTLPDTPPYATEGRLIGRFKRAASTFRYENFNGRVGGSDLRGTLVY QQRAPRPLLSGELVSNLLQFSDLAPIIGADTAASKARRGDTTKQPPGRVLPVETFRTDRWRALDADVKFTGRKLIKSAAL PISDLYTHIVMTDGVLSLEPLKFGVAGGSLATTAHLDGSAAPLKGRFSVAARHLKLKQLFPTQKVMQSALGEINGDAALS ATGNSPAALAATSNGEVKMLMTDGAISRLLMEAAGLNVANVLYEKMFGSHDVKINCAAVDFVATNGLLDTKLFAFDTDDA LINIDGPIDLRNESMNLKVHPHTKGFRVFSLRSPLYVKGTFKNPDVGVDAAALALRAGAMVGLGLVNPFAALIPLIAPSN NRDVPCSELFAQLKAPQKAANARK >Mature_823_residues ALTRTLGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIKVGWRRPDGETGWRAWVPWPVF SASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVVIPTIELVNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLR DFGFAKGTVVYRDAITKADLSVAVDTLGQPIPLGDVLRQQEETSRAASAQRVGKRGAAQLAAKAQAQIASDASAASAAGA PNASGAAAASGASGVNAAASAAKVSGNDRSRAARATAGASAASKPAAAASGGSAAVVAAGKAPAAGAGGAVASASASAAS SASAVSTSAAVSGASGASAASAAEQRSAGPTYAFGLTVKGRYKGVPIDGTGKVGGVLSLRDASRPFPLQADVKAGDTRLA IVGTLTDPVHLAAIDLRLWLQGSSMSHLYPLTGVTLPDTPPYATEGRLIGRFKRAASTFRYENFNGRVGGSDLRGTLVYQ QRAPRPLLSGELVSNLLQFSDLAPIIGADTAASKARRGDTTKQPPGRVLPVETFRTDRWRALDADVKFTGRKLIKSAALP ISDLYTHIVMTDGVLSLEPLKFGVAGGSLATTAHLDGSAAPLKGRFSVAARHLKLKQLFPTQKVMQSALGEINGDAALSA TGNSPAALAATSNGEVKMLMTDGAISRLLMEAAGLNVANVLYEKMFGSHDVKINCAAVDFVATNGLLDTKLFAFDTDDAL INIDGPIDLRNESMNLKVHPHTKGFRVFSLRSPLYVKGTFKNPDVGVDAAALALRAGAMVGLGLVNPFAALIPLIAPSNN RDVPCSELFAQLKAPQKAANARK
Specific function: Unknown
COG id: COG2982
COG function: function code M; Uncharacterized protein involved in outer membrane biogenesis
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI226510981, Length=494, Percent_Identity=46.7611336032389, Blast_Score=461, Evalue=1e-131,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007844 [H]
Pfam domain/function: PF05170 AsmA [H]
EC number: NA
Molecular weight: Translated: 85557; Mature: 85426
Theoretical pI: Translated: 10.48; Mature: 10.48
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALTRTLGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIK CCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCEE VGWRRPDGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVV EEEECCCCCCCCEEECCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHEEHHHHHHHHHH IPTIELVNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKAD HHHHHHHCCHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEEECCCCCCEEEEECCCCHHH LSVAVDTLGQPIPLGDVLRQQEETSRAASAQRVGKRGAAQLAAKAQAQIASDASAASAAG HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCC APNASGAAAASGASGVNAAASAAKVSGNDRSRAARATAGASAASKPAAAASGGSAAVVAA CCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE GKAPAAGAGGAVASASASAASSASAVSTSAAVSGASGASAASAAEQRSAGPTYAFGLTVK CCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEEEE GRYKGVPIDGTGKVGGVLSLRDASRPFPLQADVKAGDTRLAIVGTLTDPVHLAAIDLRLW CCCCCCCCCCCCCCCCEEEECCCCCCCCCEECCCCCCEEEEEEEECCCCEEEEEEEEEEE LQGSSMSHLYPLTGVTLPDTPPYATEGRLIGRFKRAASTFRYENFNGRVGGSDLRGTLVY EECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEE QQRAPRPLLSGELVSNLLQFSDLAPIIGADTAASKARRGDTTKQPPGRVLPVETFRTDRW ECCCCCCCCCHHHHHHHHHHHCCCCHHCCCHHHHHHHCCCCCCCCCCCEEEHHHCCCCCE RALDADVKFTGRKLIKSAALPISDLYTHIVMTDGVLSLEPLKFGVAGGSLATTAHLDGSA EEECCCCCHHHHHHHHHHCCCHHHHHHHHHEECCCEEECCEEEEECCCCEEEEEECCCCC APLKGRFSVAARHLKLKQLFPTQKVMQSALGEINGDAALSATGNSPAALAATSNGEVKML CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCEEEE MTDGAISRLLMEAAGLNVANVLYEKMFGSHDVKINCAAVDFVATNGLLDTKLFAFDTDDA EECHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEEEEEEECCCEECEEEEEECCCE LINIDGPIDLRNESMNLKVHPHTKGFRVFSLRSPLYVKGTFKNPDVGVDAAALALRAGAM EEEECCCEEECCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHH VGLGLVNPFAALIPLIAPSNNRDVPCSELFAQLKAPQKAANARK EEHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHCCCHHHHCCCC >Mature Secondary Structure ALTRTLGKTAAWIVGIFAVLTAAVGVFIFTFDWNRAKPWINEQASASIGRPFEIRGDIK CCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCCCCCCCCCCCCEEEECCEE VGWRRPDGETGWRAWVPWPVFSASRIVIGNPPWAKAPNFATLDEARFELAVLPLLAHEVV EEEECCCCCCCCEEECCCCCCCCCEEEECCCCCCCCCCCCCHHHHHHHEEHHHHHHHHHH IPTIELVNPALDIERLADGRNNWTFEFKQSAGPSPWKVQLRDFGFAKGTVVYRDAITKAD HHHHHHHCCHHHHHHHHCCCCCCEEEECCCCCCCCEEEEEEECCCCCCEEEEECCCCHHH LSVAVDTLGQPIPLGDVLRQQEETSRAASAQRVGKRGAAQLAAKAQAQIASDASAASAAG HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCC APNASGAAAASGASGVNAAASAAKVSGNDRSRAARATAGASAASKPAAAASGGSAAVVAA CCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEE GKAPAAGAGGAVASASASAASSASAVSTSAAVSGASGASAASAAEQRSAGPTYAFGLTVK CCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEEEEEEEE GRYKGVPIDGTGKVGGVLSLRDASRPFPLQADVKAGDTRLAIVGTLTDPVHLAAIDLRLW CCCCCCCCCCCCCCCCEEEECCCCCCCCCEECCCCCCEEEEEEEECCCCEEEEEEEEEEE LQGSSMSHLYPLTGVTLPDTPPYATEGRLIGRFKRAASTFRYENFNGRVGGSDLRGTLVY EECCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCEEEEE QQRAPRPLLSGELVSNLLQFSDLAPIIGADTAASKARRGDTTKQPPGRVLPVETFRTDRW ECCCCCCCCCHHHHHHHHHHHCCCCHHCCCHHHHHHHCCCCCCCCCCCEEEHHHCCCCCE RALDADVKFTGRKLIKSAALPISDLYTHIVMTDGVLSLEPLKFGVAGGSLATTAHLDGSA EEECCCCCHHHHHHHHHHCCCHHHHHHHHHEECCCEEECCEEEEECCCCEEEEEECCCCC APLKGRFSVAARHLKLKQLFPTQKVMQSALGEINGDAALSATGNSPAALAATSNGEVKML CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCEEEE MTDGAISRLLMEAAGLNVANVLYEKMFGSHDVKINCAAVDFVATNGLLDTKLFAFDTDDA EECHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEEEEEEECCCEECEEEEEECCCE LINIDGPIDLRNESMNLKVHPHTKGFRVFSLRSPLYVKGTFKNPDVGVDAAALALRAGAM EEEECCCEEECCCCEEEEECCCCCCEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHH VGLGLVNPFAALIPLIAPSNNRDVPCSELFAQLKAPQKAANARK EEHHHHHHHHHHHEEECCCCCCCCCHHHHHHHHCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]