| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126454087
Identifier: 126454087
GI number: 126454087
Start: 384410
End: 385489
Strand: Direct
Name: 126454087
Synonym: BURPS1106A_0420
Alternate gene names: NA
Gene position: 384410-385489 (Clockwise)
Preceding gene: 126452635
Following gene: 126454650
Centisome position: 9.64
GC content: 70.28
Gene sequence:
>1080_bases ATGAATGCACTGGAACACCAACTCGATTACCCGTTCGCCGACGCGCTGCCCGAGCCGGGCGGCTTCGTCGAGGTCGCGCC GGGCGTGCGCTGGCTGCGCATGCCGCTGCCGTTCGCGCTCGACCACATCAATCTGTGGCTGCTGCGCGACGAGATCGACG GGCAGGCGGGCTGGACGATCGTCGACTGCGGGATCGCGTCGGAGCAGATCAAGGCGCATTGGGAACGGATCTTCGATGCG CATCTGGACGGGCTGCCCGTGCTGCGCGTGATCGTCACGCATTGCCATCCGGATCATTTCGGACTCGCGAACTGGCTGTG CGACGGCGGTGCGCGCGCGCGCTGGAACGTGCGGCTGTGGATGACGCTCGGCGAATACCTGTTCGGCTGCGTGATGGCGG CCGGCAACGGCTCGAACGCGGGCGGGCCCGCCGCCGCCGACCATTTCGCGCGCCACGGCCTGGCCGATCCGGCCGCGCTC GACAAGCTGCGCAACCGCCGCGGCTATTACGCGGACCTCGTGCCCGCCGTGCCGCCGCGCTACCGGCGGCTGCGCGAAGG CGACGCGCTCGCGATCGGCGCGCGCGAATGGCGGGTCGTCACGGGCTACGGCCATTCGCCCGAACATTGCGCGCTCCACT GCGCGGCCGACGGCATGCTGATCTCCGGCGACATGGTGTTGCCGCGGATCTCGACGAACGTGTCGGTGTTCGATCTCGAA CCGGAGGCGAACCCGCTCGCGCTGTATCTGGAGTCGCTCGGCCGCTACGAAGCGATGGCGGAGGGCACGCTCGTGCTGCC GTCGCACGGCTTGCCGTTTCGCGGCGTGAGAACGCGTATCGCGCAACTGCGCGCGCACCACGACGCGCGCCTCGCCGAGG TGCGCGCCGCGTGCCGCGAGCGGCCGATGAGCGCGGCCGACATCGTGCCGATCATGTTCAAGCGCGGCGGGCTCGACATT CATCAGATGACTTTCGCGCTCGGCGAGGCGATCGCGCACCTGAACCTGCTGTGGCTCGCGGGCGAGCTCGCGCGGGAGAC GGGCGCGGACGGCGTGCTCCGGTTCCGGCACGCGGGCTGA
Upstream 100 bases:
>100_bases CGAAGGCGGCCCGGCGCGCCTTCGCGCATTGAGCGCTAGAATCGGTTCCGGCCCGCGCCGCGGCGCGGCGCCCGACGACA ACGCAACGAGACACCCCCCG
Downstream 100 bases:
>100_bases CACGGCGGGCGCAGGCGCGGACGGGACGCGGGAAGGCGTCGAACGATCGGGCTCGGCGGGCGCGCTTGCGATTTCCGGAC GGCGCGCTCCGGCGAGGGCG
Product: metallo-beta-lactamase family protein
Products: NA
Alternate protein names: Metallo-Beta-Lactamase Family Protein; Beta-Lactamase Domain Protein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Metallo-Beta-Lactamase Superfamily Protein; Metallo-Beta-Lactamase Superfamily; Zn-Dependent Hydrolase; Beta Lactamase; Metallo-Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase; Metallo-Dependent Enzymatic Protein; Zinc Metallohydrolase; Metallo-Hydrolase/Oxidoreductase Superfamily Protein; Zn-Dependent Hydrolase Including Glyoxylase-Like Protein; Zinc Metallohydrolase Glyoxalase II Family
Number of amino acids: Translated: 359; Mature: 359
Protein sequence:
>359_residues MNALEHQLDYPFADALPEPGGFVEVAPGVRWLRMPLPFALDHINLWLLRDEIDGQAGWTIVDCGIASEQIKAHWERIFDA HLDGLPVLRVIVTHCHPDHFGLANWLCDGGARARWNVRLWMTLGEYLFGCVMAAGNGSNAGGPAAADHFARHGLADPAAL DKLRNRRGYYADLVPAVPPRYRRLREGDALAIGAREWRVVTGYGHSPEHCALHCAADGMLISGDMVLPRISTNVSVFDLE PEANPLALYLESLGRYEAMAEGTLVLPSHGLPFRGVRTRIAQLRAHHDARLAEVRAACRERPMSAADIVPIMFKRGGLDI HQMTFALGEAIAHLNLLWLAGELARETGADGVLRFRHAG
Sequences:
>Translated_359_residues MNALEHQLDYPFADALPEPGGFVEVAPGVRWLRMPLPFALDHINLWLLRDEIDGQAGWTIVDCGIASEQIKAHWERIFDA HLDGLPVLRVIVTHCHPDHFGLANWLCDGGARARWNVRLWMTLGEYLFGCVMAAGNGSNAGGPAAADHFARHGLADPAAL DKLRNRRGYYADLVPAVPPRYRRLREGDALAIGAREWRVVTGYGHSPEHCALHCAADGMLISGDMVLPRISTNVSVFDLE PEANPLALYLESLGRYEAMAEGTLVLPSHGLPFRGVRTRIAQLRAHHDARLAEVRAACRERPMSAADIVPIMFKRGGLDI HQMTFALGEAIAHLNLLWLAGELARETGADGVLRFRHAG >Mature_359_residues MNALEHQLDYPFADALPEPGGFVEVAPGVRWLRMPLPFALDHINLWLLRDEIDGQAGWTIVDCGIASEQIKAHWERIFDA HLDGLPVLRVIVTHCHPDHFGLANWLCDGGARARWNVRLWMTLGEYLFGCVMAAGNGSNAGGPAAADHFARHGLADPAAL DKLRNRRGYYADLVPAVPPRYRRLREGDALAIGAREWRVVTGYGHSPEHCALHCAADGMLISGDMVLPRISTNVSVFDLE PEANPLALYLESLGRYEAMAEGTLVLPSHGLPFRGVRTRIAQLRAHHDARLAEVRAACRERPMSAADIVPIMFKRGGLDI HQMTFALGEAIAHLNLLWLAGELARETGADGVLRFRHAG
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39518; Mature: 39518
Theoretical pI: Translated: 6.69; Mature: 6.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNALEHQLDYPFADALPEPGGFVEVAPGVRWLRMPLPFALDHINLWLLRDEIDGQAGWTI CCCHHHHCCCCHHHCCCCCCCEEEECCCCEEEECCCCHHCCCEEEEEEEECCCCCCCCEE VDCGIASEQIKAHWERIFDAHLDGLPVLRVIVTHCHPDHFGLANWLCDGGARARWNVRLW EECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEEEH MTLGEYLFGCVMAAGNGSNAGGPAAADHFARHGLADPAALDKLRNRRGYYADLVPAVPPR HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCEEECCCCCCHH YRRLREGDALAIGAREWRVVTGYGHSPEHCALHCAADGMLISGDMVLPRISTNVSVFDLE HHHHCCCCEEEECCCEEEEEECCCCCCCCEEEEEECCCEEEECCEEECEECCCEEEEEEC PEANPLALYLESLGRYEAMAEGTLVLPSHGLPFRGVRTRIAQLRAHHDARLAEVRAACRE CCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RPMSAADIVPIMFKRGGLDIHQMTFALGEAIAHLNLLWLAGELARETGADGVLRFRHAG CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC >Mature Secondary Structure MNALEHQLDYPFADALPEPGGFVEVAPGVRWLRMPLPFALDHINLWLLRDEIDGQAGWTI CCCHHHHCCCCHHHCCCCCCCEEEECCCCEEEECCCCHHCCCEEEEEEEECCCCCCCCEE VDCGIASEQIKAHWERIFDAHLDGLPVLRVIVTHCHPDHFGLANWLCDGGARARWNVRLW EECCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHCCCCCCEEEEEEEH MTLGEYLFGCVMAAGNGSNAGGPAAADHFARHGLADPAALDKLRNRRGYYADLVPAVPPR HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCEEECCCCCCHH YRRLREGDALAIGAREWRVVTGYGHSPEHCALHCAADGMLISGDMVLPRISTNVSVFDLE HHHHCCCCEEEECCCEEEEEECCCCCCCCEEEEEECCCEEEECCEEECEECCCEEEEEEC PEANPLALYLESLGRYEAMAEGTLVLPSHGLPFRGVRTRIAQLRAHHDARLAEVRAACRE CCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH RPMSAADIVPIMFKRGGLDIHQMTFALGEAIAHLNLLWLAGELARETGADGVLRFRHAG CCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA