| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is quiP [H]
Identifier: 126454080
GI number: 126454080
Start: 2010835
End: 2013207
Strand: Direct
Name: quiP [H]
Synonym: BURPS1106A_2028
Alternate gene names: 126454080
Gene position: 2010835-2013207 (Clockwise)
Preceding gene: 126454991
Following gene: 126452733
Centisome position: 50.42
GC content: 73.7
Gene sequence:
>2373_bases ATGGCATCTCGCACGAACCGCTTGCCGCGGTGGCTCAAGATCCTGCCCGGCGTCATTCTTCTCGGCGCGCTGCTCGTCGC GGCCGGCGCGGCGCTGTTCCTGCGCGCGAGCCTGCCGCGGCTCGACGGCGACGTGCGCGCGCCGACGCTCGGCGGCCCGA TGACGATCGAACGCGACGCCGCGGGCGTGCCGACCGTCGCCGCGCGCGACCGCTTCGACGCCGCCTACGGCATCGGCTAC CTGCATGCGCAGGACCGCTTCTTCCAGATGGATTATCTGCGCCGGACCGGAGCAGGGGAGTTGGCGGAGCTGCTCGGGCC CGCCGCGCTGGATTTCGATCGCGAGCACCGGCTGTTCCGGTTTCGCGCGCGCGCCGCGGCGGCGTTCGCGCAGTTGCCGC CCGACGAGCGGCGCCTGCTCGAACGCTACACGCAAGGCGTGAACGACGGGCTCGCCGCGCTGCGCGCCCGGCCGTTCGAA TACGCGCTGCTCGGCGAGCCGCCGGCGCGGTGGCGGCCCGAAGATTCGCTGCTCGTGATCTGGGCGATGTACTTTCAGGT GCAGGGCACGCTCGCGTCGCGCGACATCGCGCGCAACTGGCTGACGGCGCACGCGACGCAGCAGCAGCGCGCCTTCCTGC TGCCGTCGTCGAGCGGATTCGACGCGCCGCTCGATGCGCCGCGCATCGACGAAGCGCCCGCGCCGCTGCCCGACGCCGCG CCCGACTGGTTCCGCGCCGCAGGCGACGGCGCGGCCAAGCGCGCATCGCTCGATTTCCGCTCGTCGGTCGGCAGCAACAA CTGGGCCATTGCCGGCAGCCGCAGCGCACGCGGCGCGGCCATCGTCGGCGACGACATGCACCTCGTGCTCGGCCTGCCGA ACACCTGGTATCGCGCGGCCTTCACCTATTCGGGCGGCGCGGCGCCCGTGCGGCGGGCCGTCGGCGTGACGCTCGCCGGG CTGCCGGCGATCGTGGCCGGCAGCAACGGGCATGTCGCATGGGGCTTGACGGTCGGTTACGCGGATTGCCTCGACCTCGT GCCGCTCGAGCGCGACGGCGACGATTCGCGGGCGTTCCGGATGAGCGGCGCGCGCCAGATCGCGCGCCGGTACGTCGAAT CGATCCGGGTGCGCGGCGGCGCGTCCGTTTCGCTGACCGTGCTGGAAACGACGGTCGGGCCGGTGCGGGAAATCGGCGGC CGGCCCTATGCGGTCCACTGGGTCGCGCAGTCGCCGGGCGCGGTGAACCTGGGGCTCGCGCGCCTCGCGGACGCCGTCGA CGTCGACGGCGCGATGCGCGTGGCGAATACGCTCGGCATTCCGGCCGAGAACATCGTGGTCGGCGACCGCGCCGGGCGAA TCGGCTGGACCATCGCCGGCGCGCTGCCGGACCGGCGCGCGCCGCGCGGCGGCGAGGGCGCGGCGTGGCGGTCGCTGCTG CCGCCCGACGCGTATCCGCGCGTCGTCGATCCGTCCGGCGGCCAGCTCTGGACCGCGAACAGCCGCCAGTTGGCGGGCGG CGCATACCGGTTGATCGGCGATGGCGGCACGGATCTCGGCGCGCGGGCGACCCAGCTGCGCGACGGACTGACGGCGCTCG GCCGCACCGACGAACAAGCGGCGTATCGGATCGCCCTCGACGATCGCGCGCTGTTCATCGCGCAGTGGCGCGACCGCGCG CTGCGCGTGCTCGACGATGCGGCGCTCGCGGGCCACCCGTCGCGCGCGGAATTCCGCCGGCTGCTCGAGCACGGCTGGAC GGGCCGGGCGAGCGTCGACTCGGTCGGGTACACGCTCGCGCGCGGCTTTCTGTATCGGCTGTACGACGTCACGTTCGACG GGCTGAACGCACGCCTGAAGCAAGTCGATGCGGGCGCGGACTACGAGCTGGCGAATCTGCGCTGGCCGGCCGTCGTCGCG CGGCTGCTCGACGCGCAGCCGCCGGGCTGGCTGCCGGCCGGCGCGTCGAGCTGGCGCGACGTGCAACTGATCGCGATCGA CCGGACCATCGCCGCGCTCACGGCCGACGGCGCGCCGCTCGCGCGGGCGAGCTGGGGCGCGCGCAACACGCTGCGGATCG CGCATCCGTTCGCCGGCAGCCTGCCGCTGCTCGGCGGATGGCTGACGGCGCCGGCCGCGCAGATGCCGGGTGATTCGCAC ATGCCGCGCGTCGCCGCGCCGGATTTCGGGCAATCCGAGCGGATGGTCGTGTCGCCGGGGCACGAGGAATTCGGGATCTT CAACATGCCGGGCGGGCAGAGCGGGCATCCGCTGAGCCCGTTTTTCCTCGCGGGCCACGATGCGTGGGTGCGCGCGGAGC CGACGCCGTTCTTGCCCGGCGTCGCGCGGCATACGTTGAGATTCGCGCCGTAG
Upstream 100 bases:
>100_bases CCCGCCGCCTGCCTCGGAGCGCCGCGTGCCGCCGCGCTCCGGAGGCGGGCGGCGCGGCGCCAACCCGTCTCCCCGTCCCG TCTCAGGAAATCGCGTACTC
Downstream 100 bases:
>100_bases CCGTGATCTTGGTCGTGACCGTGACCGCGGCGAACGCGTGAAGCGCTTCGGTGCGGGTTCGCTTCCGGATGCGGGCGCCG TGCTCAGCCCGAGTCGCTCG
Product: putative penicillin amidase
Products: NA
Alternate protein names: AHL acylase quiP; Acyl-HSL acylase quiP; Quorum signal utilization and inactivation protein; Acyl-HSL acylase quiP subunit alpha; Acyl-HSL acylase quiP subunit beta [H]
Number of amino acids: Translated: 790; Mature: 789
Protein sequence:
>790_residues MASRTNRLPRWLKILPGVILLGALLVAAGAALFLRASLPRLDGDVRAPTLGGPMTIERDAAGVPTVAARDRFDAAYGIGY LHAQDRFFQMDYLRRTGAGELAELLGPAALDFDREHRLFRFRARAAAAFAQLPPDERRLLERYTQGVNDGLAALRARPFE YALLGEPPARWRPEDSLLVIWAMYFQVQGTLASRDIARNWLTAHATQQQRAFLLPSSSGFDAPLDAPRIDEAPAPLPDAA PDWFRAAGDGAAKRASLDFRSSVGSNNWAIAGSRSARGAAIVGDDMHLVLGLPNTWYRAAFTYSGGAAPVRRAVGVTLAG LPAIVAGSNGHVAWGLTVGYADCLDLVPLERDGDDSRAFRMSGARQIARRYVESIRVRGGASVSLTVLETTVGPVREIGG RPYAVHWVAQSPGAVNLGLARLADAVDVDGAMRVANTLGIPAENIVVGDRAGRIGWTIAGALPDRRAPRGGEGAAWRSLL PPDAYPRVVDPSGGQLWTANSRQLAGGAYRLIGDGGTDLGARATQLRDGLTALGRTDEQAAYRIALDDRALFIAQWRDRA LRVLDDAALAGHPSRAEFRRLLEHGWTGRASVDSVGYTLARGFLYRLYDVTFDGLNARLKQVDAGADYELANLRWPAVVA RLLDAQPPGWLPAGASSWRDVQLIAIDRTIAALTADGAPLARASWGARNTLRIAHPFAGSLPLLGGWLTAPAAQMPGDSH MPRVAAPDFGQSERMVVSPGHEEFGIFNMPGGQSGHPLSPFFLAGHDAWVRAEPTPFLPGVARHTLRFAP
Sequences:
>Translated_790_residues MASRTNRLPRWLKILPGVILLGALLVAAGAALFLRASLPRLDGDVRAPTLGGPMTIERDAAGVPTVAARDRFDAAYGIGY LHAQDRFFQMDYLRRTGAGELAELLGPAALDFDREHRLFRFRARAAAAFAQLPPDERRLLERYTQGVNDGLAALRARPFE YALLGEPPARWRPEDSLLVIWAMYFQVQGTLASRDIARNWLTAHATQQQRAFLLPSSSGFDAPLDAPRIDEAPAPLPDAA PDWFRAAGDGAAKRASLDFRSSVGSNNWAIAGSRSARGAAIVGDDMHLVLGLPNTWYRAAFTYSGGAAPVRRAVGVTLAG LPAIVAGSNGHVAWGLTVGYADCLDLVPLERDGDDSRAFRMSGARQIARRYVESIRVRGGASVSLTVLETTVGPVREIGG RPYAVHWVAQSPGAVNLGLARLADAVDVDGAMRVANTLGIPAENIVVGDRAGRIGWTIAGALPDRRAPRGGEGAAWRSLL PPDAYPRVVDPSGGQLWTANSRQLAGGAYRLIGDGGTDLGARATQLRDGLTALGRTDEQAAYRIALDDRALFIAQWRDRA LRVLDDAALAGHPSRAEFRRLLEHGWTGRASVDSVGYTLARGFLYRLYDVTFDGLNARLKQVDAGADYELANLRWPAVVA RLLDAQPPGWLPAGASSWRDVQLIAIDRTIAALTADGAPLARASWGARNTLRIAHPFAGSLPLLGGWLTAPAAQMPGDSH MPRVAAPDFGQSERMVVSPGHEEFGIFNMPGGQSGHPLSPFFLAGHDAWVRAEPTPFLPGVARHTLRFAP >Mature_789_residues ASRTNRLPRWLKILPGVILLGALLVAAGAALFLRASLPRLDGDVRAPTLGGPMTIERDAAGVPTVAARDRFDAAYGIGYL HAQDRFFQMDYLRRTGAGELAELLGPAALDFDREHRLFRFRARAAAAFAQLPPDERRLLERYTQGVNDGLAALRARPFEY ALLGEPPARWRPEDSLLVIWAMYFQVQGTLASRDIARNWLTAHATQQQRAFLLPSSSGFDAPLDAPRIDEAPAPLPDAAP DWFRAAGDGAAKRASLDFRSSVGSNNWAIAGSRSARGAAIVGDDMHLVLGLPNTWYRAAFTYSGGAAPVRRAVGVTLAGL PAIVAGSNGHVAWGLTVGYADCLDLVPLERDGDDSRAFRMSGARQIARRYVESIRVRGGASVSLTVLETTVGPVREIGGR PYAVHWVAQSPGAVNLGLARLADAVDVDGAMRVANTLGIPAENIVVGDRAGRIGWTIAGALPDRRAPRGGEGAAWRSLLP PDAYPRVVDPSGGQLWTANSRQLAGGAYRLIGDGGTDLGARATQLRDGLTALGRTDEQAAYRIALDDRALFIAQWRDRAL RVLDDAALAGHPSRAEFRRLLEHGWTGRASVDSVGYTLARGFLYRLYDVTFDGLNARLKQVDAGADYELANLRWPAVVAR LLDAQPPGWLPAGASSWRDVQLIAIDRTIAALTADGAPLARASWGARNTLRIAHPFAGSLPLLGGWLTAPAAQMPGDSHM PRVAAPDFGQSERMVVSPGHEEFGIFNMPGGQSGHPLSPFFLAGHDAWVRAEPTPFLPGVARHTLRFAP
Specific function: Catalyzes the deacylation of acyl-homoserine lactone (AHL or acyl-HSL), releasing homoserine lactone (HSL) and the corresponding fatty acid. Possesses a specificity for the degradation of long-chain acyl-HSLs (side chains of seven or more carbons in lengt
COG id: COG2366
COG function: function code R; Protein related to penicillin acylase
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S45 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014395 - InterPro: IPR002692 [H]
Pfam domain/function: PF01804 Penicil_amidase [H]
EC number: =3.5.1.97 [H]
Molecular weight: Translated: 84809; Mature: 84678
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRTNRLPRWLKILPGVILLGALLVAAGAALFLRASLPRLDGDVRAPTLGGPMTIERDA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCC AGVPTVAARDRFDAAYGIGYLHAQDRFFQMDYLRRTGAGELAELLGPAALDFDREHRLFR CCCCCHHHCCCCCHHHCEEEEECCCHHHHHHHHHHCCCHHHHHHHCCHHCCCCCHHHHHH FRARAAAAFAQLPPDERRLLERYTQGVNDGLAALRARPFEYALLGEPPARWRPEDSLLVI HHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEE WAMYFQVQGTLASRDIARNWLTAHATQQQRAFLLPSSSGFDAPLDAPRIDEAPAPLPDAA EEEEHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC PDWFRAAGDGAAKRASLDFRSSVGSNNWAIAGSRSARGAAIVGDDMHLVLGLPNTWYRAA CHHHHHCCCCCHHHCCCHHHHHCCCCCEEEECCCCCCCEEEECCCEEEEEECCCCCEEEE FTYSGGAAPVRRAVGVTLAGLPAIVAGSNGHVAWGLTVGYADCLDLVPLERDGDDSRAFR EEECCCCHHHHHHHCCEEECCCEEEECCCCCEEEEEEECHHHHHHCCCCCCCCCCCHHHH MSGARQIARRYVESIRVRGGASVSLTVLETTVGPVREIGGRPYAVHWVAQSPGAVNLGLA HHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHCCCCEEEEEEECCCCCEEHHHH RLADAVDVDGAMRVANTLGIPAENIVVGDRAGRIGWTIAGALPDRRAPRGGEGAAWRSLL HHHHHHCCCCHHHHHHHCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHCCC PPDAYPRVVDPSGGQLWTANSRQLAGGAYRLIGDGGTDLGARATQLRDGLTALGRTDEQA CCCCCCCEECCCCCEEEECCCCEECCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCC AYRIALDDRALFIAQWRDRALRVLDDAALAGHPSRAEFRRLLEHGWTGRASVDSVGYTLA EEEEEECCCEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHH RGFLYRLYDVTFDGLNARLKQVDAGADYELANLRWPAVVARLLDAQPPGWLPAGASSWRD HHHHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCC VQLIAIDRTIAALTADGAPLARASWGARNTLRIAHPFAGSLPLLGGWLTAPAAQMPGDSH EEEEEECCEEEEEECCCCCCHHCCCCCCCEEEEECCCCCCCCCCCCHHCCCCHHCCCCCC MPRVAAPDFGQSERMVVSPGHEEFGIFNMPGGQSGHPLSPFFLAGHDAWVRAEPTPFLPG CCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCCCCCCCCEEEECCCCEEECCCCCCCCC VARHTLRFAP HHHHHEECCC >Mature Secondary Structure ASRTNRLPRWLKILPGVILLGALLVAAGAALFLRASLPRLDGDVRAPTLGGPMTIERDA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCC AGVPTVAARDRFDAAYGIGYLHAQDRFFQMDYLRRTGAGELAELLGPAALDFDREHRLFR CCCCCHHHCCCCCHHHCEEEEECCCHHHHHHHHHHCCCHHHHHHHCCHHCCCCCHHHHHH FRARAAAAFAQLPPDERRLLERYTQGVNDGLAALRARPFEYALLGEPPARWRPEDSLLVI HHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCEEEE WAMYFQVQGTLASRDIARNWLTAHATQQQRAFLLPSSSGFDAPLDAPRIDEAPAPLPDAA EEEEHHHHCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC PDWFRAAGDGAAKRASLDFRSSVGSNNWAIAGSRSARGAAIVGDDMHLVLGLPNTWYRAA CHHHHHCCCCCHHHCCCHHHHHCCCCCEEEECCCCCCCEEEECCCEEEEEECCCCCEEEE FTYSGGAAPVRRAVGVTLAGLPAIVAGSNGHVAWGLTVGYADCLDLVPLERDGDDSRAFR EEECCCCHHHHHHHCCEEECCCEEEECCCCCEEEEEEECHHHHHHCCCCCCCCCCCHHHH MSGARQIARRYVESIRVRGGASVSLTVLETTVGPVREIGGRPYAVHWVAQSPGAVNLGLA HHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHCCCCEEEEEEECCCCCEEHHHH RLADAVDVDGAMRVANTLGIPAENIVVGDRAGRIGWTIAGALPDRRAPRGGEGAAWRSLL HHHHHHCCCCHHHHHHHCCCCCCCEEECCCCCCCEEEEEECCCCCCCCCCCCCCCHHCCC PPDAYPRVVDPSGGQLWTANSRQLAGGAYRLIGDGGTDLGARATQLRDGLTALGRTDEQA CCCCCCCEECCCCCEEEECCCCEECCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCC AYRIALDDRALFIAQWRDRALRVLDDAALAGHPSRAEFRRLLEHGWTGRASVDSVGYTLA EEEEEECCCEEEEEHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHH RGFLYRLYDVTFDGLNARLKQVDAGADYELANLRWPAVVARLLDAQPPGWLPAGASSWRD HHHHHHHHHHHHCCCCHHHHHHCCCCCEEECCCCHHHHHHHHHCCCCCCCCCCCCCCCCC VQLIAIDRTIAALTADGAPLARASWGARNTLRIAHPFAGSLPLLGGWLTAPAAQMPGDSH EEEEEECCEEEEEECCCCCCHHCCCCCCCEEEEECCCCCCCCCCCCHHCCCCHHCCCCCC MPRVAAPDFGQSERMVVSPGHEEFGIFNMPGGQSGHPLSPFFLAGHDAWVRAEPTPFLPG CCCCCCCCCCCCCEEEECCCCCCCCEEECCCCCCCCCCCCEEEECCCCEEECCCCCCCCC VARHTLRFAP HHHHHEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]