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The map label for this gene is ptpA [C]

Identifier: 126454074

GI number: 126454074

Start: 2615687

End: 2616181

Strand: Reverse

Name: ptpA [C]

Synonym: BURPS1106A_2657

Alternate gene names: 126454074

Gene position: 2616181-2615687 (Counterclockwise)

Preceding gene: 126451997

Following gene: 126453431

Centisome position: 65.59

GC content: 69.7

Gene sequence:

>495_bases
GTGTCCGGCTGCACGATGAAAAGCGTCGCGATCTGTTTCGTCTGCCTCGGCAATATCTGCCGCTCGCCCACCGCGGAAGG
GGTGATGCGCCATCAGGTGGCCGCAGCGGGGCTCGACGGGGCGATCGAGATCGATTCGGCCGGCACGGGCGACTGGCATG
TCGGCGAAGCGCCCGACGCGCGCGCGCAGCAAGCGGCGCGTGCGCGGGGCTACGATCTGTCGGCGCTGCGGGCGCGGCAG
ATCGGCGACGCCGATTTCGAACGCTTCGATCTCGTGCTCGCGATGGACGGCGCCAATCTCGCGGCGTTGCGCAAGCGCTG
CCCGCCGCAATATCGGGGCAAGGTCCGGCTCCTGATGGAATTCGCGGGCGACGGCTCGGCCGGCGACATCGCCGATCCAT
ATTTCGGCGGCGCGCGCGGCTTCGAGCAGGTGCTCGATCAGTGCGAGGCCGCGTGCCGCGGCCTTCTCGACAGCCTGCGT
GAAACGGCGCGCTGA

Upstream 100 bases:

>100_bases
CTCGGCGGCCCGAAGGCGCTGTGACGCGGCACCCGGCGCAAGCGGGAATTGGCGCGCCTTTGTATAATGGCGCGTTATCC
ATTCGAGCGGTTCGCCGCGC

Downstream 100 bases:

>100_bases
GGCGCCGCATACAACCCCTTTTAGCGGCAGGGATACTTGACTAAATTGGTCAAATATTTATACTTGACCAAAATCGTCAA
GATTGCTGCCCATTCAATAC

Product: low molecular weight protein-tyrosine-phosphatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 164; Mature: 163

Protein sequence:

>164_residues
MSGCTMKSVAICFVCLGNICRSPTAEGVMRHQVAAAGLDGAIEIDSAGTGDWHVGEAPDARAQQAARARGYDLSALRARQ
IGDADFERFDLVLAMDGANLAALRKRCPPQYRGKVRLLMEFAGDGSAGDIADPYFGGARGFEQVLDQCEAACRGLLDSLR
ETAR

Sequences:

>Translated_164_residues
MSGCTMKSVAICFVCLGNICRSPTAEGVMRHQVAAAGLDGAIEIDSAGTGDWHVGEAPDARAQQAARARGYDLSALRARQ
IGDADFERFDLVLAMDGANLAALRKRCPPQYRGKVRLLMEFAGDGSAGDIADPYFGGARGFEQVLDQCEAACRGLLDSLR
ETAR
>Mature_163_residues
SGCTMKSVAICFVCLGNICRSPTAEGVMRHQVAAAGLDGAIEIDSAGTGDWHVGEAPDARAQQAARARGYDLSALRARQI
GDADFERFDLVLAMDGANLAALRKRCPPQYRGKVRLLMEFAGDGSAGDIADPYFGGARGFEQVLDQCEAACRGLLDSLRE
TAR

Specific function: Dephosphorylates Wzc. Required For The Extracellular Polysaccharide Colanic Acid Synthesis. Probably Involved In The Export Of Colanic Acid From The Cell To Medium. [C]

COG id: COG0394

COG function: function code T; Protein-tyrosine-phosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the low molecular weight phosphotyrosine protein phosphatase family [H]

Homologues:

Organism=Homo sapiens, GI6005988, Length=150, Percent_Identity=40, Blast_Score=109, Evalue=1e-24,
Organism=Homo sapiens, GI4757714, Length=150, Percent_Identity=38, Blast_Score=105, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6325330, Length=155, Percent_Identity=33.5483870967742, Blast_Score=107, Evalue=6e-25,
Organism=Drosophila melanogaster, GI78706770, Length=152, Percent_Identity=41.4473684210526, Blast_Score=119, Evalue=1e-27,
Organism=Drosophila melanogaster, GI78706772, Length=152, Percent_Identity=41.4473684210526, Blast_Score=119, Evalue=1e-27,
Organism=Drosophila melanogaster, GI78706766, Length=147, Percent_Identity=37.4149659863946, Blast_Score=103, Evalue=6e-23,
Organism=Drosophila melanogaster, GI78706768, Length=147, Percent_Identity=37.4149659863946, Blast_Score=103, Evalue=6e-23,
Organism=Drosophila melanogaster, GI78711846, Length=149, Percent_Identity=38.255033557047, Blast_Score=97, Evalue=7e-21,
Organism=Drosophila melanogaster, GI78706764, Length=125, Percent_Identity=36.8, Blast_Score=91, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000106
- InterPro:   IPR017867 [H]

Pfam domain/function: PF01451 LMWPc [H]

EC number: =3.1.3.48 [H]

Molecular weight: Translated: 17441; Mature: 17310

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
4.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGCTMKSVAICFVCLGNICRSPTAEGVMRHQVAAAGLDGAIEIDSAGTGDWHVGEAPDA
CCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCH
RAQQAARARGYDLSALRARQIGDADFERFDLVLAMDGANLAALRKRCPPQYRGKVRLLME
HHHHHHHHCCCCHHHHHHHHCCCCCHHHEEEEEEECCCCHHHHHHHCCCCCCCHHHHHEE
FAGDGSAGDIADPYFGGARGFEQVLDQCEAACRGLLDSLRETAR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SGCTMKSVAICFVCLGNICRSPTAEGVMRHQVAAAGLDGAIEIDSAGTGDWHVGEAPDA
CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCH
RAQQAARARGYDLSALRARQIGDADFERFDLVLAMDGANLAALRKRCPPQYRGKVRLLME
HHHHHHHHCCCCHHHHHHHHCCCCCHHHEEEEEEECCCCHHHHHHHCCCCCCCHHHHHEE
FAGDGSAGDIADPYFGGARGFEQVLDQCEAACRGLLDSLRETAR
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]