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The map label for this gene is rsgA [H]

Identifier: 126454053

GI number: 126454053

Start: 2856473

End: 2857417

Strand: Direct

Name: rsgA [H]

Synonym: BURPS1106A_2910

Alternate gene names: 126454053

Gene position: 2856473-2857417 (Clockwise)

Preceding gene: 126455211

Following gene: 126452397

Centisome position: 71.62

GC content: 69.21

Gene sequence:

>945_bases
ATGAAGCGCGCGCCGACGAAGCAGCCGGCCAAGCCCGCCGCGCGCGGCGGTGAACGCGCGCAGGGGCGCGTGATCGCCGC
GCACGGCCGCCACTACATCGTCGCGCCCGCCGACGGCGGCCCGATGCTGCAATGTTTCCCGCGCGGCAAGAAGAGCGAAG
TCGCGGTCGGCGACCGCGTCGCCTATGAACGGACGTCGGCCGACCAGGGCGTGATCGTCGAGATCGGCGAGCGGCGCAAC
CTGCTCTACCGCTCCGATCAGTTCAAGTCGAAGCTCTTCGCCGCGAATCTCGATCAGTTGCTGATCGTGCTCGCGACCGA
GCCGTATTTCAGCGAGGATCTGCTCGGGCGCGCGCTGATCGCCGCCGAGGCGAACGAGCTGAAGCCGATCGTCGTGCTGA
ACAAGATCGACGTCGAGGCGGCGCTGCCCGTCGCGCGCGAGCGCCTCGCCCCCTACCGCGCGCTCGGCTACGATGTGCTC
GAGCTGTCGGTCAAGGGCGCGCCCGACGACGCGCGCGCGCAGCTCGCGCCGCGCCTGGCCGGCCATTCGACGATCCTGCT
CGGACAATCGGGAATGGGTAAGTCGACGCTCGTGAACCTGCTCGTGCCGGATGCCGAGGCGGCGACGCGCGAAATCTCCG
CCGCGCTCAACAGCGGCCGCCACACGACGACGTTCACGCGCCTCTACCCGCTGCAGGACGGCGGCGCGCTGATCGATTCG
CCGGGCTTCCAGGAGTTCGGGCTCTATCATCTGACGGAAGGCCGCCTCGAGCGCGCGTTCCCGGAGTTCCGGCCGCTGCT
GGCGCACTGCCGTTTCTATAATTGTCATCATCTGCACGAGCCGGGCTGCGCGATTCTGGAAGCGCTCGCCGACGGCAGGA
TCGCGCCGACGCGCCATGCGCTCTACGCGCAGCTCGTGCACGAGGCGAGCCAGATCGTCCGCTAG

Upstream 100 bases:

>100_bases
AAGACAATGCGTCGACGCTCACGCCCGACCCCGTCTACACCGCGTTCTACTACTCGCATCCGCCCGCGTCGCAGCGTATC
GACCGGCTGCTCCAGCACTC

Downstream 100 bases:

>100_bases
CCGGGCAGCGCAAGCGGGCCGCATGCGCGCCGCCGCACGCTCGCCAGGCAACGAAAGGAGACGCCGCCATGCGCCTGAAA
GCCCCCGACCTCGCAACCGC

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 314; Mature: 314

Protein sequence:

>314_residues
MKRAPTKQPAKPAARGGERAQGRVIAAHGRHYIVAPADGGPMLQCFPRGKKSEVAVGDRVAYERTSADQGVIVEIGERRN
LLYRSDQFKSKLFAANLDQLLIVLATEPYFSEDLLGRALIAAEANELKPIVVLNKIDVEAALPVARERLAPYRALGYDVL
ELSVKGAPDDARAQLAPRLAGHSTILLGQSGMGKSTLVNLLVPDAEAATREISAALNSGRHTTTFTRLYPLQDGGALIDS
PGFQEFGLYHLTEGRLERAFPEFRPLLAHCRFYNCHHLHEPGCAILEALADGRIAPTRHALYAQLVHEASQIVR

Sequences:

>Translated_314_residues
MKRAPTKQPAKPAARGGERAQGRVIAAHGRHYIVAPADGGPMLQCFPRGKKSEVAVGDRVAYERTSADQGVIVEIGERRN
LLYRSDQFKSKLFAANLDQLLIVLATEPYFSEDLLGRALIAAEANELKPIVVLNKIDVEAALPVARERLAPYRALGYDVL
ELSVKGAPDDARAQLAPRLAGHSTILLGQSGMGKSTLVNLLVPDAEAATREISAALNSGRHTTTFTRLYPLQDGGALIDS
PGFQEFGLYHLTEGRLERAFPEFRPLLAHCRFYNCHHLHEPGCAILEALADGRIAPTRHALYAQLVHEASQIVR
>Mature_314_residues
MKRAPTKQPAKPAARGGERAQGRVIAAHGRHYIVAPADGGPMLQCFPRGKKSEVAVGDRVAYERTSADQGVIVEIGERRN
LLYRSDQFKSKLFAANLDQLLIVLATEPYFSEDLLGRALIAAEANELKPIVVLNKIDVEAALPVARERLAPYRALGYDVL
ELSVKGAPDDARAQLAPRLAGHSTILLGQSGMGKSTLVNLLVPDAEAATREISAALNSGRHTTTFTRLYPLQDGGALIDS
PGFQEFGLYHLTEGRLERAFPEFRPLLAHCRFYNCHHLHEPGCAILEALADGRIAPTRHALYAQLVHEASQIVR

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=306, Percent_Identity=38.2352941176471, Blast_Score=190, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 34249; Mature: 34249

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRAPTKQPAKPAARGGERAQGRVIAAHGRHYIVAPADGGPMLQCFPRGKKSEVAVGDRV
CCCCCCCCCCCHHHCCCCCCCCCEEEECCCEEEEEECCCCCEEEEECCCCCCCEECCCHH
AYERTSADQGVIVEIGERRNLLYRSDQFKSKLFAANLDQLLIVLATEPYFSEDLLGRALI
EEECCCCCCCEEEEECCCCCEEECCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHH
AAEANELKPIVVLNKIDVEAALPVARERLAPYRALGYDVLELSVKGAPDDARAQLAPRLA
ECCCCCCCEEEEEEECCCHHHHHHHHHHCCCHHHHCCEEEEEEECCCCCHHHHHHHHHHC
GHSTILLGQSGMGKSTLVNLLVPDAEAATREISAALNSGRHTTTFTRLYPLQDGGALIDS
CCEEEEEECCCCCHHHEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEECC
PGFQEFGLYHLTEGRLERAFPEFRPLLAHCRFYNCHHLHEPGCAILEALADGRIAPTRHA
CCCHHCCEEEECCCHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHH
LYAQLVHEASQIVR
HHHHHHHHHHHHCC
>Mature Secondary Structure
MKRAPTKQPAKPAARGGERAQGRVIAAHGRHYIVAPADGGPMLQCFPRGKKSEVAVGDRV
CCCCCCCCCCCHHHCCCCCCCCCEEEECCCEEEEEECCCCCEEEEECCCCCCCEECCCHH
AYERTSADQGVIVEIGERRNLLYRSDQFKSKLFAANLDQLLIVLATEPYFSEDLLGRALI
EEECCCCCCCEEEEECCCCCEEECCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHH
AAEANELKPIVVLNKIDVEAALPVARERLAPYRALGYDVLELSVKGAPDDARAQLAPRLA
ECCCCCCCEEEEEEECCCHHHHHHHHHHCCCHHHHCCEEEEEEECCCCCHHHHHHHHHHC
GHSTILLGQSGMGKSTLVNLLVPDAEAATREISAALNSGRHTTTFTRLYPLQDGGALIDS
CCEEEEEECCCCCHHHEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCCEEECC
PGFQEFGLYHLTEGRLERAFPEFRPLLAHCRFYNCHHLHEPGCAILEALADGRIAPTRHA
CCCHHCCEEEECCCHHHHHCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCCHHHH
LYAQLVHEASQIVR
HHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA