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The map label for this gene is sun [H]

Identifier: 126454034

GI number: 126454034

Start: 956981

End: 958243

Strand: Direct

Name: sun [H]

Synonym: BURPS1106A_0974

Alternate gene names: 126454034

Gene position: 956981-958243 (Clockwise)

Preceding gene: 126454710

Following gene: 126452978

Centisome position: 23.99

GC content: 70.7

Gene sequence:

>1263_bases
ATGAAGCTGCACGGTTTCCTGATTGGCCAGACCGAGGCGCTCCTCGCCGAAGTCCTGAAATTCGCCGGCCCGGCCGACGT
GACGACGAGCCGCTTCTTCCGCGCGCACCCGAAGCTCGGTCACGCCGAGCGCGGCGTGATCGCCGAGGCGGTGTTCGCGG
TGCTGCGGCGGAGGATGGAGTACGCGCACCTCGCCGAGAGCGGCACCGGCGCGCCGGCGCGGCGCCTGGCGCTGCTCGGG
CTGATGCAGACGGTCGGCCGCTCGGCGCTCAAGCCGTTCGTGTCGGACGCCGAATGGGCGTGGCTCGACCACGTTGCGAA
GATCGATCCGGCGAGCCTGCCGCTGCGCGTGCGCACGAACCTGCCCGACTGGATTCACCAGGCGCTCGCCGAGCGCCTGG
GCGCCGACGAGCTCGCGCAGTTCGCGGCGGCCGTCAACTATCCGGCGCCGCTCGATCTGCGTGCGAACGCGCTGAAGGCG
ACGCGCGACCAGGTGATCGACAGCCTGCGTGCCGCGGGCATCGACGCCGGCGCGACGCCGTTCGCGCCGTTCGGCGTGCG
CGTGGTCGGCAAGCCGGCGCTCACGAAGCTCAAGCTGTTCGAGGAGGGGCTGATCGAGGTGCAGGACGAGGGCAGCCAGT
TGCTGTGCTCGCTCGTCGCGCCGCGCCGCGGCGAGATGATCGTCGATTTCTGCGCGGGCGCGGGCGGCAAGACGCTCGCG
CTCGGCGCGATGATGCGCTCGACGGGGCGCCTCTATGCATTCGACGTGTCCGAGAAGCGTCTTGCGAAGCTGAAGCCGCG
CTTGGCGAGAAGCGGCCTGTCGAACGTGAACCCGGTGCTGATCGACAGCGAGCACGACGCGAAGATCAAGCGGCTCGCGG
GCAAGATCGACCGCGTGCTCGTCGATGCGCCGTGCAGCGGCCTCGGCACGCTGCGCCGCAATCCCGATCTGAAGTGGCGC
CAGTCGCGCGAGACGGTCGATGAGCTCGCGCCGAAGCAGGCGTCGATTCTCGCGAGCGCCGCGCGCCTCGTGAAGAAGGG
CGGCCGGCTCGTGTACGCGACCTGCAGCGTGCTCGAGGCGGAGAACGAAGCGATCGTGTCGGCGTTCCTCGCCGCGCATC
CGGCGTTCGAGCTCGTGCCGGCGAGCCGCGTGCTCGCCGAGCAGCGGATCGCGCTCGACACGGGCGACTACCTGTCGCTC
TGGCCGCATCGCCACGCGACCGACGGCTTTTTCGCCGCCGTGCTCGAGCGGCGCGCGCAGTAA

Upstream 100 bases:

>100_bases
AAGGCAAGCTGCGCCTCGACGCGGGGCGCGCCATCGTTGCGCCCGACGAGGCGCGCTGGCTATTCGCGGATGCGATCGAC
ACGTCGACGAGCGAGGGCGT

Downstream 100 bases:

>100_bases
CGGGCGGCGGCATGATGACGAACCACCTCACACGGCGGCTCGCGGCCGTCGCGCACGACTTCGGCCAGCCGGCGATGATC
TGGCAGGCGGTCGCGTTCTT

Product: rRNA small subunit methyltransferase B

Products: NA

Alternate protein names: rRNA (cytosine-C(5)-)-methyltransferase rsmB [H]

Number of amino acids: Translated: 420; Mature: 420

Protein sequence:

>420_residues
MKLHGFLIGQTEALLAEVLKFAGPADVTTSRFFRAHPKLGHAERGVIAEAVFAVLRRRMEYAHLAESGTGAPARRLALLG
LMQTVGRSALKPFVSDAEWAWLDHVAKIDPASLPLRVRTNLPDWIHQALAERLGADELAQFAAAVNYPAPLDLRANALKA
TRDQVIDSLRAAGIDAGATPFAPFGVRVVGKPALTKLKLFEEGLIEVQDEGSQLLCSLVAPRRGEMIVDFCAGAGGKTLA
LGAMMRSTGRLYAFDVSEKRLAKLKPRLARSGLSNVNPVLIDSEHDAKIKRLAGKIDRVLVDAPCSGLGTLRRNPDLKWR
QSRETVDELAPKQASILASAARLVKKGGRLVYATCSVLEAENEAIVSAFLAAHPAFELVPASRVLAEQRIALDTGDYLSL
WPHRHATDGFFAAVLERRAQ

Sequences:

>Translated_420_residues
MKLHGFLIGQTEALLAEVLKFAGPADVTTSRFFRAHPKLGHAERGVIAEAVFAVLRRRMEYAHLAESGTGAPARRLALLG
LMQTVGRSALKPFVSDAEWAWLDHVAKIDPASLPLRVRTNLPDWIHQALAERLGADELAQFAAAVNYPAPLDLRANALKA
TRDQVIDSLRAAGIDAGATPFAPFGVRVVGKPALTKLKLFEEGLIEVQDEGSQLLCSLVAPRRGEMIVDFCAGAGGKTLA
LGAMMRSTGRLYAFDVSEKRLAKLKPRLARSGLSNVNPVLIDSEHDAKIKRLAGKIDRVLVDAPCSGLGTLRRNPDLKWR
QSRETVDELAPKQASILASAARLVKKGGRLVYATCSVLEAENEAIVSAFLAAHPAFELVPASRVLAEQRIALDTGDYLSL
WPHRHATDGFFAAVLERRAQ
>Mature_420_residues
MKLHGFLIGQTEALLAEVLKFAGPADVTTSRFFRAHPKLGHAERGVIAEAVFAVLRRRMEYAHLAESGTGAPARRLALLG
LMQTVGRSALKPFVSDAEWAWLDHVAKIDPASLPLRVRTNLPDWIHQALAERLGADELAQFAAAVNYPAPLDLRANALKA
TRDQVIDSLRAAGIDAGATPFAPFGVRVVGKPALTKLKLFEEGLIEVQDEGSQLLCSLVAPRRGEMIVDFCAGAGGKTLA
LGAMMRSTGRLYAFDVSEKRLAKLKPRLARSGLSNVNPVLIDSEHDAKIKRLAGKIDRVLVDAPCSGLGTLRRNPDLKWR
QSRETVDELAPKQASILASAARLVKKGGRLVYATCSVLEAENEAIVSAFLAAHPAFELVPASRVLAEQRIALDTGDYLSL
WPHRHATDGFFAAVLERRAQ

Specific function: Unknown

COG id: COG0144

COG function: function code J; tRNA and rRNA cytosine-C5-methylases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmB/NOP family [H]

Homologues:

Organism=Homo sapiens, GI76150625, Length=320, Percent_Identity=29.6875, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI76150623, Length=320, Percent_Identity=29.6875, Blast_Score=120, Evalue=2e-27,
Organism=Homo sapiens, GI32698918, Length=184, Percent_Identity=32.0652173913043, Blast_Score=98, Evalue=2e-20,
Organism=Homo sapiens, GI23199998, Length=295, Percent_Identity=29.8305084745763, Blast_Score=96, Evalue=7e-20,
Organism=Homo sapiens, GI8922322, Length=295, Percent_Identity=29.1525423728814, Blast_Score=96, Evalue=7e-20,
Organism=Homo sapiens, GI270288818, Length=295, Percent_Identity=29.1525423728814, Blast_Score=96, Evalue=8e-20,
Organism=Homo sapiens, GI270288816, Length=295, Percent_Identity=29.8305084745763, Blast_Score=96, Evalue=8e-20,
Organism=Homo sapiens, GI301336155, Length=351, Percent_Identity=26.7806267806268, Blast_Score=82, Evalue=9e-16,
Organism=Homo sapiens, GI39995082, Length=296, Percent_Identity=27.7027027027027, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI40316918, Length=189, Percent_Identity=31.7460317460317, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI11545785, Length=163, Percent_Identity=32.5153374233129, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI2367212, Length=337, Percent_Identity=31.4540059347181, Blast_Score=132, Evalue=3e-32,
Organism=Escherichia coli, GI87081985, Length=304, Percent_Identity=28.6184210526316, Blast_Score=107, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17536757, Length=295, Percent_Identity=29.8305084745763, Blast_Score=116, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI115534021, Length=226, Percent_Identity=31.4159292035398, Blast_Score=89, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI71998419, Length=226, Percent_Identity=31.4159292035398, Blast_Score=88, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI25143471, Length=306, Percent_Identity=28.1045751633987, Blast_Score=82, Evalue=6e-16,
Organism=Saccharomyces cerevisiae, GI6324268, Length=306, Percent_Identity=27.1241830065359, Blast_Score=110, Evalue=4e-25,
Organism=Saccharomyces cerevisiae, GI6319447, Length=243, Percent_Identity=27.1604938271605, Blast_Score=74, Evalue=3e-14,
Organism=Drosophila melanogaster, GI22024126, Length=314, Percent_Identity=27.0700636942675, Blast_Score=108, Evalue=5e-24,
Organism=Drosophila melanogaster, GI21356579, Length=221, Percent_Identity=27.6018099547511, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI21355201, Length=276, Percent_Identity=27.1739130434783, Blast_Score=81, Evalue=1e-15,
Organism=Drosophila melanogaster, GI24668781, Length=193, Percent_Identity=32.1243523316062, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI21356513, Length=193, Percent_Identity=32.1243523316062, Blast_Score=80, Evalue=3e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001678
- InterPro:   IPR018314
- InterPro:   IPR006027
- InterPro:   IPR004573 [H]

Pfam domain/function: PF01189 Nol1_Nop2_Fmu; PF01029 NusB [H]

EC number: NA

Molecular weight: Translated: 45500; Mature: 45500

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLHGFLIGQTEALLAEVLKFAGPADVTTSRFFRAHPKLGHAERGVIAEAVFAVLRRRME
CCCCEEEECCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
YAHLAESGTGAPARRLALLGLMQTVGRSALKPFVSDAEWAWLDHVAKIDPASLPLRVRTN
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEECC
LPDWIHQALAERLGADELAQFAAAVNYPAPLDLRANALKATRDQVIDSLRAAGIDAGATP
CHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
FAPFGVRVVGKPALTKLKLFEEGLIEVQDEGSQLLCSLVAPRRGEMIVDFCAGAGGKTLA
CCCCCEEEECCCHHHHHHHHHHCCCEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHH
LGAMMRSTGRLYAFDVSEKRLAKLKPRLARSGLSNVNPVLIDSEHDAKIKRLAGKIDRVL
HHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHEE
VDAPCSGLGTLRRNPDLKWRQSRETVDELAPKQASILASAARLVKKGGRLVYATCSVLEA
EECCCCCCHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHC
ENEAIVSAFLAAHPAFELVPASRVLAEQRIALDTGDYLSLWPHRHATDGFFAAVLERRAQ
CCHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MKLHGFLIGQTEALLAEVLKFAGPADVTTSRFFRAHPKLGHAERGVIAEAVFAVLRRRME
CCCCEEEECCHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH
YAHLAESGTGAPARRLALLGLMQTVGRSALKPFVSDAEWAWLDHVAKIDPASLPLRVRTN
HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCEEEECC
LPDWIHQALAERLGADELAQFAAAVNYPAPLDLRANALKATRDQVIDSLRAAGIDAGATP
CHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
FAPFGVRVVGKPALTKLKLFEEGLIEVQDEGSQLLCSLVAPRRGEMIVDFCAGAGGKTLA
CCCCCEEEECCCHHHHHHHHHHCCCEECCCHHHHHHHHHCCCCCCEEEEECCCCCCCHHH
LGAMMRSTGRLYAFDVSEKRLAKLKPRLARSGLSNVNPVLIDSEHDAKIKRLAGKIDRVL
HHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHHEE
VDAPCSGLGTLRRNPDLKWRQSRETVDELAPKQASILASAARLVKKGGRLVYATCSVLEA
EECCCCCCHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCEEEEEHHHHHC
ENEAIVSAFLAAHPAFELVPASRVLAEQRIALDTGDYLSLWPHRHATDGFFAAVLERRAQ
CCHHHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCCCCCEECCCCCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]