Click here to switch to the map view.

The map label for this gene is cheD [H]

Identifier: 126454009

GI number: 126454009

Start: 3839035

End: 3839739

Strand: Reverse

Name: cheD [H]

Synonym: BURPS1106A_3932

Alternate gene names: 126454009

Gene position: 3839739-3839035 (Counterclockwise)

Preceding gene: 126451760

Following gene: 126452993

Centisome position: 96.27

GC content: 69.08

Gene sequence:

>705_bases
ATGAGCGGGCTGCCGATCGCGACCAACCTCTATTTCGATGCGCACTTTCACCGCCACGGCGTGAAGCTGCTGCCGAACGA
GTTCTACACGACGCGCGAGGACATGGTGCTCGTCACGGTGCTCGGCTCGTGCGTGGCCGCGTGCCTGCACGATCCGATCG
GGCGGATCGGCGGGATGAACCACTTCATGCTGCCCGACGACGGCGCGGACCCGTCCGCCGCCGCGTCCGAATCGATGCGC
TACGGCGCGTATGCGATGGAAGTGCTGATCAACGAGCTCATCAAGGCGGGCGGCCGGCGCGAGCGCTTCGAGGCGAAGGT
GTTCGGCGGCGCGGCCGTGCTCGCCGGGATGACGACGATCAACATCGGCGATCGCAACGCCGATTTCGTGCGCCGCTATC
TGGCGCTCGAGCGCATCCGCATTACCGCCGAGGATCTGCAGGGCGTGCATCCGCGCAAGGTCGCGTTCATGCCGCACACG
GGGCAGGCGATGGTCAAGAAGCTGCGCGTGCAGGCGCCCGACGTCGCCGCGCGGGAAGCCGCGCTCGCGCGCGAGGCGGT
CGACCCGCACGGCGAGCGCGCGCCCCGCGTGCGGCCGCGTGTCGAGCTGTTCGGCACGCCCGCGCCGAAGGCGCAGGCGA
AGCCTCGCATCGAATTGTTCGGTATGCGGGCCACGCAGCCCGCCACAAGAAAGCAGGAGGCTTGA

Upstream 100 bases:

>100_bases
TGCGCGGGCAGACGGTCTACGAACTGACGCGCGACGGGCAGTCGGCCGCGCCGCGCGTGCGCGCGCGCATCGCCGCGGCG
GCGGCCGAGGAGGAACTCCG

Downstream 100 bases:

>100_bases
ACGCTGTGCAGAAGAAAATCAAAGTGCTGTGCGTCGACGATTCGGCGCTGATCCGCAGCCTGATGACAGAAATCATCAAC
AGCCAGCCCGACATGGAAGT

Product: chemoreceptor glutamine deamidase CheD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 234; Mature: 233

Protein sequence:

>234_residues
MSGLPIATNLYFDAHFHRHGVKLLPNEFYTTREDMVLVTVLGSCVAACLHDPIGRIGGMNHFMLPDDGADPSAAASESMR
YGAYAMEVLINELIKAGGRRERFEAKVFGGAAVLAGMTTINIGDRNADFVRRYLALERIRITAEDLQGVHPRKVAFMPHT
GQAMVKKLRVQAPDVAAREAALAREAVDPHGERAPRVRPRVELFGTPAPKAQAKPRIELFGMRATQPATRKQEA

Sequences:

>Translated_234_residues
MSGLPIATNLYFDAHFHRHGVKLLPNEFYTTREDMVLVTVLGSCVAACLHDPIGRIGGMNHFMLPDDGADPSAAASESMR
YGAYAMEVLINELIKAGGRRERFEAKVFGGAAVLAGMTTINIGDRNADFVRRYLALERIRITAEDLQGVHPRKVAFMPHT
GQAMVKKLRVQAPDVAAREAALAREAVDPHGERAPRVRPRVELFGTPAPKAQAKPRIELFGMRATQPATRKQEA
>Mature_233_residues
SGLPIATNLYFDAHFHRHGVKLLPNEFYTTREDMVLVTVLGSCVAACLHDPIGRIGGMNHFMLPDDGADPSAAASESMRY
GAYAMEVLINELIKAGGRRERFEAKVFGGAAVLAGMTTINIGDRNADFVRRYLALERIRITAEDLQGVHPRKVAFMPHTG
QAMVKKLRVQAPDVAAREAALAREAVDPHGERAPRVRPRVELFGTPAPKAQAKPRIELFGMRATQPATRKQEA

Specific function: Probably deamidates glutamine residues to glutamate on methyl-accepting chemotaxis receptors (MCPs), playing an important role in chemotaxis [H]

COG id: COG1871

COG function: function code NT; Chemotaxis protein; stimulates methylation of MCP proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CheD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005659 [H]

Pfam domain/function: PF03975 CheD [H]

EC number: =3.5.1.44 [H]

Molecular weight: Translated: 25682; Mature: 25551

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGLPIATNLYFDAHFHRHGVKLLPNEFYTTREDMVLVTVLGSCVAACLHDPIGRIGGMN
CCCCCEEEEEEEECHHHHCCCEECCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
HFMLPDDGADPSAAASESMRYGAYAMEVLINELIKAGGRRERFEAKVFGGAAVLAGMTTI
CEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHCCEEE
NIGDRNADFVRRYLALERIRITAEDLQGVHPRKVAFMPHTGQAMVKKLRVQAPDVAAREA
EECCCCHHHHHHHHHHHHHHEEHHHHCCCCCCEEEECCCCCHHHHHHHHCCCCCHHHHHH
ALAREAVDPHGERAPRVRPRVELFGTPAPKAQAKPRIELFGMRATQPATRKQEA
HHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
SGLPIATNLYFDAHFHRHGVKLLPNEFYTTREDMVLVTVLGSCVAACLHDPIGRIGGMN
CCCCEEEEEEEECHHHHCCCEECCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
HFMLPDDGADPSAAASESMRYGAYAMEVLINELIKAGGRRERFEAKVFGGAAVLAGMTTI
CEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHHCCEEE
NIGDRNADFVRRYLALERIRITAEDLQGVHPRKVAFMPHTGQAMVKKLRVQAPDVAAREA
EECCCCHHHHHHHHHHHHHHEEHHHHCCCCCCEEEECCCCCHHHHHHHHCCCCCHHHHHH
ALAREAVDPHGERAPRVRPRVELFGTPAPKAQAKPRIELFGMRATQPATRKQEA
HHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA