| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is actP [H]
Identifier: 126454006
GI number: 126454006
Start: 439979
End: 441694
Strand: Direct
Name: actP [H]
Synonym: BURPS1106A_0475
Alternate gene names: 126454006
Gene position: 439979-441694 (Clockwise)
Preceding gene: 126452953
Following gene: 126452996
Centisome position: 11.03
GC content: 69.46
Gene sequence:
>1716_bases ATGCTGCGTCGATCAACCGCGCGCTGCGCGCGTCTCATGCCGGCCGCGCTCTTCGCGTGCGCGGCGCTGGCTCCGGCGGC CGCGCGCGCGATGGGCGCCGCCGCCGCGCCGATGCCCGAAAAGGTCGTGCCGAATCCCGTCGCGATCGGCATGTTCTTCG TCTTCGTGTTCGCGACGCTCGCGCTCACGCGCTGGGCCGCGCGCCGCACCCGCAGCGCGCGCGATTTCTACACGGCGGGC GGCGGCATCACCGGCTTGCAGAACGGGCTCGCGATCGCGGGCGACTACATGTCCGCCGCCTCGTTTCTCGGCTTGTCGGG CATGGTGTTCATGTTCGGCTTCGACGGGCTCATCTACTCGATCGGCTTTCTCGTCGGCTGGCCGTTCGTGATGTTCCTGA TCGCCGAGCCGCTGCGCAACCTCGGCAAGTTCACGTTCGTCGACGTCGTCGCGTACCGCTTCGCGCAGCGGCCGATCCGG CTCCTCACGTCCGCCAGCGCGCTGACGATCGTCGTGCTGTATCTCGTCGTGCAGATGGTCGGCGCGGGCAAGCTGATCCA GCTGCTGTTCGGGCTGTCGTACGGCGTCGCGGAGCTGATCGTCGGCGTGCTGATGGTCGTCTACGTGTTCTTCGGCGGGA TGACCGCGACGACCTGGGTGCAGGTGATCAAGGCCGTGCTGCTGCTCGCCGGCGCGACGCTGCTCGCCGCGCTCGCGCTC GGCGAGTTCGGCTTCAGCCTCGACGAGATGTTCCGCCGCGCGGTGGCCGTGCATCCGGGCGCGCTCGGCATCATGGGGCC CGGCAAGCTGATCCGCGATCCGGCCAACGCGCTGTCGCTCGGCATCGCGCTGATGTTCGGCACCGCGGGCTTTCCGCATA TCCTGATGCGCTTCTTCACGGTGCCGAACGCGAAGGAGGCGCGCAAATCGGTGCTGTACGCGACGGGCTTCATCGGCTAC TTCTATCTGCTCACGTTCGTGATCGGCTTCTCGGCGATCGTGCTGCTCGCGCAACATCCGGAGTTCTTCCGCCACGACGC GGCGGGCGCGTTCGACCTGACGCGCGATCTCGTCGGCGGCTCGAACATGGTCGCGGTGAAGCTCGCGCAGGCGGTCGGCG GCAACTGGTTCTACGGTTTCATCGCGGCCGTGACGTTCGCGACGATCCTCGCCGTCGTCGCGGGCTTGACGCTCGCCGGC GCGACGACGATCTCGCACGATCTCTACGCGCAGATGTGGGCGCGCGGCAAGCCGCACGAGCGGCGCGAGATGCGCATTTC GCGCGCGGCGACGCTCGCGCTGTCCGCGGTCGCGATCGGCCTGTCGGTCCTGTTCGAGCACGTGAACGTCGCGTTCATGG TCGGGCTCGTCGCGGCGGTGGCGGCGAGCGCGAATTTCCCGGTGCTCGCGACGTCGATCTTCTGGCGCGGGATGACGACG CGCGGCGCGGTGGCGGGCGGCGGGCTCGGGCTCGCGTCGGCCGTCGCGCTCACGGTGCTGTCGAAATCGGTGTGGGTCGA CGTGCTGCATCACGCGCACGCGCCGGTGTTCCTCGACAATCCGGCGCTCGTTTCGGTGCCGCTCGCGTTCGCGGGCATCG TGATCGGCTCGCTCACCGATCGCAGCGAGCGCGCGCGGCGCGAACGCGACGCATTCGCGCGCCAGGAGTTCTATGCGCAG ACGGGCGCGCTCGCCACCCGGGCCGCCACGCACTGA
Upstream 100 bases:
>100_bases TCGTCGCGATCGGCCTGACGGCCGGCTACGTGCTGCGCGCGAACCGCTCGTTCGACCGGGCGGTCGACGCGCTCTTCAAC CGTTCGTGACGGAGGCCGCG
Downstream 100 bases:
>100_bases ATCGTCGGGAAACAGGGCGCGGCCGCACGCGATCCGTCCGGCGTTCCGGACGGACGCATTCCGGAAATCCGGATTTCCGG AATGCGCGCGCCCCCGACGA
Product: acetate permease
Products: NA
Alternate protein names: Acetate permease; Acetate transporter ActP [H]
Number of amino acids: Translated: 571; Mature: 571
Protein sequence:
>571_residues MLRRSTARCARLMPAALFACAALAPAAARAMGAAAAPMPEKVVPNPVAIGMFFVFVFATLALTRWAARRTRSARDFYTAG GGITGLQNGLAIAGDYMSAASFLGLSGMVFMFGFDGLIYSIGFLVGWPFVMFLIAEPLRNLGKFTFVDVVAYRFAQRPIR LLTSASALTIVVLYLVVQMVGAGKLIQLLFGLSYGVAELIVGVLMVVYVFFGGMTATTWVQVIKAVLLLAGATLLAALAL GEFGFSLDEMFRRAVAVHPGALGIMGPGKLIRDPANALSLGIALMFGTAGFPHILMRFFTVPNAKEARKSVLYATGFIGY FYLLTFVIGFSAIVLLAQHPEFFRHDAAGAFDLTRDLVGGSNMVAVKLAQAVGGNWFYGFIAAVTFATILAVVAGLTLAG ATTISHDLYAQMWARGKPHERREMRISRAATLALSAVAIGLSVLFEHVNVAFMVGLVAAVAASANFPVLATSIFWRGMTT RGAVAGGGLGLASAVALTVLSKSVWVDVLHHAHAPVFLDNPALVSVPLAFAGIVIGSLTDRSERARRERDAFARQEFYAQ TGALATRAATH
Sequences:
>Translated_571_residues MLRRSTARCARLMPAALFACAALAPAAARAMGAAAAPMPEKVVPNPVAIGMFFVFVFATLALTRWAARRTRSARDFYTAG GGITGLQNGLAIAGDYMSAASFLGLSGMVFMFGFDGLIYSIGFLVGWPFVMFLIAEPLRNLGKFTFVDVVAYRFAQRPIR LLTSASALTIVVLYLVVQMVGAGKLIQLLFGLSYGVAELIVGVLMVVYVFFGGMTATTWVQVIKAVLLLAGATLLAALAL GEFGFSLDEMFRRAVAVHPGALGIMGPGKLIRDPANALSLGIALMFGTAGFPHILMRFFTVPNAKEARKSVLYATGFIGY FYLLTFVIGFSAIVLLAQHPEFFRHDAAGAFDLTRDLVGGSNMVAVKLAQAVGGNWFYGFIAAVTFATILAVVAGLTLAG ATTISHDLYAQMWARGKPHERREMRISRAATLALSAVAIGLSVLFEHVNVAFMVGLVAAVAASANFPVLATSIFWRGMTT RGAVAGGGLGLASAVALTVLSKSVWVDVLHHAHAPVFLDNPALVSVPLAFAGIVIGSLTDRSERARRERDAFARQEFYAQ TGALATRAATH >Mature_571_residues MLRRSTARCARLMPAALFACAALAPAAARAMGAAAAPMPEKVVPNPVAIGMFFVFVFATLALTRWAARRTRSARDFYTAG GGITGLQNGLAIAGDYMSAASFLGLSGMVFMFGFDGLIYSIGFLVGWPFVMFLIAEPLRNLGKFTFVDVVAYRFAQRPIR LLTSASALTIVVLYLVVQMVGAGKLIQLLFGLSYGVAELIVGVLMVVYVFFGGMTATTWVQVIKAVLLLAGATLLAALAL GEFGFSLDEMFRRAVAVHPGALGIMGPGKLIRDPANALSLGIALMFGTAGFPHILMRFFTVPNAKEARKSVLYATGFIGY FYLLTFVIGFSAIVLLAQHPEFFRHDAAGAFDLTRDLVGGSNMVAVKLAQAVGGNWFYGFIAAVTFATILAVVAGLTLAG ATTISHDLYAQMWARGKPHERREMRISRAATLALSAVAIGLSVLFEHVNVAFMVGLVAAVAASANFPVLATSIFWRGMTT RGAVAGGGLGLASAVALTVLSKSVWVDVLHHAHAPVFLDNPALVSVPLAFAGIVIGSLTDRSERARRERDAFARQEFYAQ TGALATRAATH
Specific function: Transports acetate [H]
COG id: COG4147
COG function: function code R; Predicted symporter
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family [H]
Homologues:
Organism=Homo sapiens, GI310128183, Length=401, Percent_Identity=22.1945137157107, Blast_Score=68, Evalue=2e-11, Organism=Escherichia coli, GI1790503, Length=550, Percent_Identity=58.1818181818182, Blast_Score=613, Evalue=1e-177, Organism=Escherichia coli, GI1787251, Length=467, Percent_Identity=25.9100642398287, Blast_Score=87, Evalue=3e-18, Organism=Escherichia coli, GI87082237, Length=380, Percent_Identity=23.4210526315789, Blast_Score=65, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014083 - InterPro: IPR001734 - InterPro: IPR018212 - InterPro: IPR019900 [H]
Pfam domain/function: PF00474 SSF [H]
EC number: NA
Molecular weight: Translated: 60583; Mature: 60583
Theoretical pI: Translated: 10.67; Mature: 10.67
Prosite motif: PS50283 NA_SOLUT_SYMP_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRRSTARCARLMPAALFACAALAPAAARAMGAAAAPMPEKVVPNPVAIGMFFVFVFATL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH ALTRWAARRTRSARDFYTAGGGITGLQNGLAIAGDYMSAASFLGLSGMVFMFGFDGLIYS HHHHHHHHHHCCHHHHHCCCCCCHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHH IGFLVGWPFVMFLIAEPLRNLGKFTFVDVVAYRFAQRPIRLLTSASALTIVVLYLVVQMV HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAGKLIQLLFGLSYGVAELIVGVLMVVYVFFGGMTATTWVQVIKAVLLLAGATLLAALAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GEFGFSLDEMFRRAVAVHPGALGIMGPGKLIRDPANALSLGIALMFGTAGFPHILMRFFT HHCCCCHHHHHHHHHHCCCCCEECCCCCHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHC VPNAKEARKSVLYATGFIGYFYLLTFVIGFSAIVLLAQHPEFFRHDAAGAFDLTRDLVGG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHCCC SNMVAVKLAQAVGGNWFYGFIAAVTFATILAVVAGLTLAGATTISHDLYAQMWARGKPHE CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCH RREMRISRAATLALSAVAIGLSVLFEHVNVAFMVGLVAAVAASANFPVLATSIFWRGMTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC RGAVAGGGLGLASAVALTVLSKSVWVDVLHHAHAPVFLDNPALVSVPLAFAGIVIGSLTD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHCCC RSERARRERDAFARQEFYAQTGALATRAATH HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLRRSTARCARLMPAALFACAALAPAAARAMGAAAAPMPEKVVPNPVAIGMFFVFVFATL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHH ALTRWAARRTRSARDFYTAGGGITGLQNGLAIAGDYMSAASFLGLSGMVFMFGFDGLIYS HHHHHHHHHHCCHHHHHCCCCCCHHHCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHH IGFLVGWPFVMFLIAEPLRNLGKFTFVDVVAYRFAQRPIRLLTSASALTIVVLYLVVQMV HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GAGKLIQLLFGLSYGVAELIVGVLMVVYVFFGGMTATTWVQVIKAVLLLAGATLLAALAL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH GEFGFSLDEMFRRAVAVHPGALGIMGPGKLIRDPANALSLGIALMFGTAGFPHILMRFFT HHCCCCHHHHHHHHHHCCCCCEECCCCCHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHC VPNAKEARKSVLYATGFIGYFYLLTFVIGFSAIVLLAQHPEFFRHDAAGAFDLTRDLVGG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHCCC SNMVAVKLAQAVGGNWFYGFIAAVTFATILAVVAGLTLAGATTISHDLYAQMWARGKPHE CCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCH RREMRISRAATLALSAVAIGLSVLFEHVNVAFMVGLVAAVAASANFPVLATSIFWRGMTT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCC RGAVAGGGLGLASAVALTVLSKSVWVDVLHHAHAPVFLDNPALVSVPLAFAGIVIGSLTD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHHHHHCCC RSERARRERDAFARQEFYAQTGALATRAATH HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA