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The map label for this gene is yhfQ [H]

Identifier: 126453996

GI number: 126453996

Start: 1889066

End: 1890262

Strand: Direct

Name: yhfQ [H]

Synonym: BURPS1106A_1937

Alternate gene names: 126453996

Gene position: 1889066-1890262 (Clockwise)

Preceding gene: 126455113

Following gene: 126452245

Centisome position: 47.36

GC content: 75.27

Gene sequence:

>1197_bases
TTGACCGCGTGGGCGCGGCGCGCGGCGCGATTCGCCCGGTTGCCGATCGGCGGCCGGACGGCGGTGCTCGTTCGGGCGAT
GCGGGCGGCGGATGCGGAGCCGGCGACGCTTCGGTCGCCTGCGGCGCCGGTGACGCGCGCGGGGCGCTTGCCGTCGCCGA
GCCGCCCGATGCGCGGCGCGCGCGCGGCGCGCCCGCTTGCCGCCGTCGCGGCGTTCGCGGCGCTCGTCGCCGGCGCGCTG
GCGTTCGCGCCTGCCGCCCATGCCGGCGAGCCGTCCGCCGTCTGCCGGCCGCTCGCCGACGATCCGACCGTATCGCAGTT
CAGCCGCACGCTGCCCGCACGGCCGGCGCGCATCGTCGTGCTCGAATTCATGTTCGCCGAGGATCTCGCGGCGCTCGACA
TCACGCCGGTCGGCATGGCCGATCCCGCGTATTACCCGATCTGGATCGGCTACGACGATGCGCGGTTCGCGCGCGTGTCC
GACGTCGGCACGCGACAGGAGCCGAGCCTCGAGGCGATCGCGGCCGCGAAGCCGGATCTGATCCTCGGCGTCGGGCTGCG
CCACGCGCCGATCTTCGACGCGCTGTCGCGGATCGCGCCGACCGTGCTGTTCAAGTACAGCCCGAACTACATCGAGGATG
GCCGGCAGGTCACGCAGTACGACTGGGCGCGCGCGATCCTGCGCACGATCGGTTGCCTCACCGGGCGCGCGCGCGACGCG
CGGGCGGTTCAGGCGCGCGTCGACGCGGGGCTCGCCCGCGATGCGCGGCGGATCGCGGCGGCCGGGCGCGCGGGCGAGCG
CGTCGCATGGCTGCAGGAGCTCGGCCTGCCCGATCGCTACTGGGCGTTCACGGGCAACAGCGCGTCGGCGGGCATCGCGC
GCGCGCTCGGCCTCGAGCCGTGGCCGGGCGAGCCGACGCGCGAAGGCACCGCGTACGTGACGTCGGAGGATCTGCTGAAG
CAGCCGGATCTCGCGGTGCTGTTCGTGAGCGCGACCGAGCCGGGCGTGCCGCTCGACGCGAAGCTCGATTCGAGCATCTG
GCGATTCGTGCCGGCGCGCCGGGCGGGGCGGGTCGCGCTCGTCGAGCGCAACATCTGGGGGTTCGGCGGCCCGATGTCGG
CGTTGCGGCTCGCCGACGAGATGACGCAGCGGGTGCTGGCATTGCCGAAGCCCGCGGCCGGCGCGCCGCCGCGGTGA

Upstream 100 bases:

>100_bases
GCCTGCGCAATGAAATTCCCGGAGAAGACCAACTGTGTGGAAGCTGTCCGCTGTTGTTGACGATGTGCGACGACGCGCTC
GCGAAGCAGGACGCCGCGCA

Downstream 100 bases:

>100_bases
TGTCGGCGCGGGCCGTCGGGGCGGGGCGGCGCGCCGGGGGGCGGCTTGACGGCCGCTGTCGCGGCTGATCGGCGATTACC
GATTGCCGAGAAACGAGAAG

Product: iron compound ABC transporter, periplasmic iron-compound-binding protein

Products: ADP; phosphate; iron dicitrate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MTAWARRAARFARLPIGGRTAVLVRAMRAADAEPATLRSPAAPVTRAGRLPSPSRPMRGARAARPLAAVAAFAALVAGAL
AFAPAAHAGEPSAVCRPLADDPTVSQFSRTLPARPARIVVLEFMFAEDLAALDITPVGMADPAYYPIWIGYDDARFARVS
DVGTRQEPSLEAIAAAKPDLILGVGLRHAPIFDALSRIAPTVLFKYSPNYIEDGRQVTQYDWARAILRTIGCLTGRARDA
RAVQARVDAGLARDARRIAAAGRAGERVAWLQELGLPDRYWAFTGNSASAGIARALGLEPWPGEPTREGTAYVTSEDLLK
QPDLAVLFVSATEPGVPLDAKLDSSIWRFVPARRAGRVALVERNIWGFGGPMSALRLADEMTQRVLALPKPAAGAPPR

Sequences:

>Translated_398_residues
MTAWARRAARFARLPIGGRTAVLVRAMRAADAEPATLRSPAAPVTRAGRLPSPSRPMRGARAARPLAAVAAFAALVAGAL
AFAPAAHAGEPSAVCRPLADDPTVSQFSRTLPARPARIVVLEFMFAEDLAALDITPVGMADPAYYPIWIGYDDARFARVS
DVGTRQEPSLEAIAAAKPDLILGVGLRHAPIFDALSRIAPTVLFKYSPNYIEDGRQVTQYDWARAILRTIGCLTGRARDA
RAVQARVDAGLARDARRIAAAGRAGERVAWLQELGLPDRYWAFTGNSASAGIARALGLEPWPGEPTREGTAYVTSEDLLK
QPDLAVLFVSATEPGVPLDAKLDSSIWRFVPARRAGRVALVERNIWGFGGPMSALRLADEMTQRVLALPKPAAGAPPR
>Mature_397_residues
TAWARRAARFARLPIGGRTAVLVRAMRAADAEPATLRSPAAPVTRAGRLPSPSRPMRGARAARPLAAVAAFAALVAGALA
FAPAAHAGEPSAVCRPLADDPTVSQFSRTLPARPARIVVLEFMFAEDLAALDITPVGMADPAYYPIWIGYDDARFARVSD
VGTRQEPSLEAIAAAKPDLILGVGLRHAPIFDALSRIAPTVLFKYSPNYIEDGRQVTQYDWARAILRTIGCLTGRARDAR
AVQARVDAGLARDARRIAAAGRAGERVAWLQELGLPDRYWAFTGNSASAGIARALGLEPWPGEPTREGTAYVTSEDLLKQ
PDLAVLFVSATEPGVPLDAKLDSSIWRFVPARRAGRVALVERNIWGFGGPMSALRLADEMTQRVLALPKPAAGAPPR

Specific function: Binds Citrate-Dependent Iron(III); Part Of The Binding- Protein-Dependent Transport System For Uptake Of Citrate-Dependent Iron(III). [C]

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082411, Length=301, Percent_Identity=30.2325581395349, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1786346, Length=265, Percent_Identity=29.4339622641509, Blast_Score=75, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 42531; Mature: 42400

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAWARRAARFARLPIGGRTAVLVRAMRAADAEPATLRSPAAPVTRAGRLPSPSRPMRGA
CCHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCH
RAARPLAAVAAFAALVAGALAFAPAAHAGEPSAVCRPLADDPTVSQFSRTLPARPARIVV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHCCCCCCEEEE
LEFMFAEDLAALDITPVGMADPAYYPIWIGYDDARFARVSDVGTRQEPSLEAIAAAKPDL
EHHHHHHCHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCHHHHHHCCCCE
ILGVGLRHAPIFDALSRIAPTVLFKYSPNYIEDGRQVTQYDWARAILRTIGCLTGRARDA
EEECCCCCCHHHHHHHHHHHEEEEEECCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHH
RAVQARVDAGLARDARRIAAAGRAGERVAWLQELGLPDRYWAFTGNSASAGIARALGLEP
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCC
WPGEPTREGTAYVTSEDLLKQPDLAVLFVSATEPGVPLDAKLDSSIWRFVPARRAGRVAL
CCCCCCCCCCEEEEHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEE
VERNIWGFGGPMSALRLADEMTQRVLALPKPAAGAPPR
EECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
TAWARRAARFARLPIGGRTAVLVRAMRAADAEPATLRSPAAPVTRAGRLPSPSRPMRGA
CHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCH
RAARPLAAVAAFAALVAGALAFAPAAHAGEPSAVCRPLADDPTVSQFSRTLPARPARIVV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCHHHHHHHCCCCCCEEEE
LEFMFAEDLAALDITPVGMADPAYYPIWIGYDDARFARVSDVGTRQEPSLEAIAAAKPDL
EHHHHHHCHHHCCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCCCCCCHHHHHHCCCCE
ILGVGLRHAPIFDALSRIAPTVLFKYSPNYIEDGRQVTQYDWARAILRTIGCLTGRARDA
EEECCCCCCHHHHHHHHHHHEEEEEECCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHH
RAVQARVDAGLARDARRIAAAGRAGERVAWLQELGLPDRYWAFTGNSASAGIARALGLEP
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHCCCC
WPGEPTREGTAYVTSEDLLKQPDLAVLFVSATEPGVPLDAKLDSSIWRFVPARRAGRVAL
CCCCCCCCCCEEEEHHHHHCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEE
VERNIWGFGGPMSALRLADEMTQRVLALPKPAAGAPPR
EECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; iron dicitrate [Periplasm]; H2O [C]

Specific reaction: ATP + iron dicitrate [Periplasm] + H2O = ADP + phosphate + iron dicitrate [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]