| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453964
Identifier: 126453964
GI number: 126453964
Start: 1745148
End: 1746749
Strand: Reverse
Name: 126453964
Synonym: BURPS1106A_1783
Alternate gene names: NA
Gene position: 1746749-1745148 (Counterclockwise)
Preceding gene: 126453854
Following gene: 126453362
Centisome position: 43.8
GC content: 74.59
Gene sequence:
>1602_bases ATGAACATCAACACGATTTCCCATGGCACGCTCCGGACGACTTTGATCGCGGCCACCGTGGCAGCCATGCTCTCCCTCTC CGCTTGCGGCGGCTCCGGCACGATCAGCAAGGGCCTCGACGGCTCGGGCTCCGGCAGCGGCGGCGGCAATGCGATTTCCA CGACGGGCGGCTCCGGCTCGGGCGGCACGAGCGGCGCGGGCGGCTCGGGTTCGGGCGGCAGCGGCAGCTCCGGCTCGACG GGCGGCCTGTCGGGCGGCGGCGGCTCGACCTCCGGCGGCGGCTCCACGTCGGGTGGCGGCTCGACCTCCGGCGGCACGTC GACCTCGTCGAGCATCAACGCGCTCGGCACGATCGCCGGCAACACGGGCGGCATCATCAGCGGCGCCGGCTCGACCGTGT CGGGCCTCGGCACCGTCGTCGGCAGCCAGACGCTGCCCGGCGTGAACCCGCAAACGACGCAAGCGCTCGGCGGCGTCGTC CAGAGTCTCGGCGGCGCGGTCAGCGCGCTCGGCTCGGGCGTGACGAGCGGCATCGGCCAGCTCGGTTCGTCGACCAACCC GATCGGCACGACGGTCGCGAGCACGGGCGGCGTGGTCAGCCAACTGGGCGGCGCCGTCACGCAGACGGGCAACCTCGTGA CGAGCCTCGGCACCGGCCCGCTCGCGCCGCTCGCCCCGCTCACGTCGCCGCTCGGCGGCGCCGTCAGCACGCTCGGCAAC ACGATCACGGCGGGCGGCACGACGCTCACCACCGCGCTGTCGACGGGCCCCGTCCAGCAACTGACGCAGACGGTCAGCTC GGCGATCACGCCGATCACGTCGATGGTCACGGGCACGACGCAGACGGTCGGCAACGTGACGGGCCTCGGCGCGCCCGTCA ACACGCTGCTCGGCACGATCGGCGGCGGGCTGAACCAGGCCGGCGCGCTGATCTCGAAGACGGGCAACAACCCGGTCACG ACGGGCCTCGGCCAAACGGTGTCGGCGACGGGCAACACGATCACGTCGGTCGGCGGCCTGCTGACGGGCGGCAGCGGCGC GACGAACCCGCTCGCGCCGATCACGGCCGCCGTCGGCGGCCTGACGGGCACGCTCAGCGGCGTCAGCGGCGCAACCTCGG GCACCCCGCTCGCACCGCTCACGAACGTCGTGTCGACGGTCACCGGCGCGCTCTCCGGCGCCACCGGCGGCGCGACGTCG ACGAGCCCGCTCGCGCCCATCACGGGCCTCGTGTCGACGGTCACCGGCGCACTCTCCGGCGCCACCGGCGGCGCGACGGG CTCGACCAGCCCGCTCGCCCCCGTCACCGGCCTCGTGTCGACCGTCACCGGCGCGCTCTCCGGCGCCACCGGCGGCACGA CGTCGACGAGCCCGCTCGCGCCCGTCACGAATCTCGTGTCGACCGCCACGGGCGCGCTCGGCGGCGCGACCGCCGCGCCG GCGACGAGCACGACGACGAGCACGACGACGAGCGCGACGAACCCGGTCGCGAGCCTCACCGCACCGTTGACCGGCACGAG CAGCGGCACGAGCGGCGCGACCAACCTGCTGGCGCCCGTCACGTCGCTCGTCGGCGGCCTGCTCGGCGGCATCAAGAAGT AA
Upstream 100 bases:
>100_bases CCGAAAAGATCGTCCAATGAAATGGCACGCCAGTTGCAGAGTAGTCGCCCGCAGGTGCAGCACATCAATCAAGAGACAAC ACACCAATGCGAGGACGATG
Downstream 100 bases:
>100_bases AAGGGCCGGCGCCCACCCAGCATCAGAAAAGACAGCGAGGAGCACCATCATGACCCAGCAACGTTTCGCCCCATCGTTCG CGCTCGCGGCCTGGCGCGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 533; Mature: 533
Protein sequence:
>533_residues MNINTISHGTLRTTLIAATVAAMLSLSACGGSGTISKGLDGSGSGSGGGNAISTTGGSGSGGTSGAGGSGSGGSGSSGST GGLSGGGGSTSGGGSTSGGGSTSGGTSTSSSINALGTIAGNTGGIISGAGSTVSGLGTVVGSQTLPGVNPQTTQALGGVV QSLGGAVSALGSGVTSGIGQLGSSTNPIGTTVASTGGVVSQLGGAVTQTGNLVTSLGTGPLAPLAPLTSPLGGAVSTLGN TITAGGTTLTTALSTGPVQQLTQTVSSAITPITSMVTGTTQTVGNVTGLGAPVNTLLGTIGGGLNQAGALISKTGNNPVT TGLGQTVSATGNTITSVGGLLTGGSGATNPLAPITAAVGGLTGTLSGVSGATSGTPLAPLTNVVSTVTGALSGATGGATS TSPLAPITGLVSTVTGALSGATGGATGSTSPLAPVTGLVSTVTGALSGATGGTTSTSPLAPVTNLVSTATGALGGATAAP ATSTTTSTTTSATNPVASLTAPLTGTSSGTSGATNLLAPVTSLVGGLLGGIKK
Sequences:
>Translated_533_residues MNINTISHGTLRTTLIAATVAAMLSLSACGGSGTISKGLDGSGSGSGGGNAISTTGGSGSGGTSGAGGSGSGGSGSSGST GGLSGGGGSTSGGGSTSGGGSTSGGTSTSSSINALGTIAGNTGGIISGAGSTVSGLGTVVGSQTLPGVNPQTTQALGGVV QSLGGAVSALGSGVTSGIGQLGSSTNPIGTTVASTGGVVSQLGGAVTQTGNLVTSLGTGPLAPLAPLTSPLGGAVSTLGN TITAGGTTLTTALSTGPVQQLTQTVSSAITPITSMVTGTTQTVGNVTGLGAPVNTLLGTIGGGLNQAGALISKTGNNPVT TGLGQTVSATGNTITSVGGLLTGGSGATNPLAPITAAVGGLTGTLSGVSGATSGTPLAPLTNVVSTVTGALSGATGGATS TSPLAPITGLVSTVTGALSGATGGATGSTSPLAPVTGLVSTVTGALSGATGGTTSTSPLAPVTNLVSTATGALGGATAAP ATSTTTSTTTSATNPVASLTAPLTGTSSGTSGATNLLAPVTSLVGGLLGGIKK >Mature_533_residues MNINTISHGTLRTTLIAATVAAMLSLSACGGSGTISKGLDGSGSGSGGGNAISTTGGSGSGGTSGAGGSGSGGSGSSGST GGLSGGGGSTSGGGSTSGGGSTSGGTSTSSSINALGTIAGNTGGIISGAGSTVSGLGTVVGSQTLPGVNPQTTQALGGVV QSLGGAVSALGSGVTSGIGQLGSSTNPIGTTVASTGGVVSQLGGAVTQTGNLVTSLGTGPLAPLAPLTSPLGGAVSTLGN TITAGGTTLTTALSTGPVQQLTQTVSSAITPITSMVTGTTQTVGNVTGLGAPVNTLLGTIGGGLNQAGALISKTGNNPVT TGLGQTVSATGNTITSVGGLLTGGSGATNPLAPITAAVGGLTGTLSGVSGATSGTPLAPLTNVVSTVTGALSGATGGATS TSPLAPITGLVSTVTGALSGATGGATGSTSPLAPVTGLVSTVTGALSGATGGTTSTSPLAPVTNLVSTATGALGGATAAP ATSTTTSTTTSATNPVASLTAPLTGTSSGTSGATNLLAPVTSLVGGLLGGIKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47596; Mature: 47596
Theoretical pI: Translated: 10.80; Mature: 10.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNINTISHGTLRTTLIAATVAAMLSLSACGGSGTISKGLDGSGSGSGGGNAISTTGGSGS CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC GGTSGAGGSGSGGSGSSGSTGGLSGGGGSTSGGGSTSGGGSTSGGTSTSSSINALGTIAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEECC NTGGIISGAGSTVSGLGTVVGSQTLPGVNPQTTQALGGVVQSLGGAVSALGSGVTSGIGQ CCCCEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGSSTNPIGTTVASTGGVVSQLGGAVTQTGNLVTSLGTGPLAPLAPLTSPLGGAVSTLGN CCCCCCCCCCHHHCCCCHHHHHCCHHHHCCCCCEECCCCCCCCHHHHCCCCHHHHHHHCC TITAGGTTLTTALSTGPVQQLTQTVSSAITPITSMVTGTTQTVGNVTGLGAPVNTLLGTI CEECCCCEEEHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHH GGGLNQAGALISKTGNNPVTTGLGQTVSATGNTITSVGGLLTGGSGATNPLAPITAAVGG CCCHHHHCHHHCCCCCCCCCCCCCCEECCCCCHHHHHCCEEECCCCCCCCHHHHHHHHHC LTGTLSGVSGATSGTPLAPLTNVVSTVTGALSGATGGATSTSPLAPITGLVSTVTGALSG HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCC ATGGATGSTSPLAPVTGLVSTVTGALSGATGGTTSTSPLAPVTNLVSTATGALGGATAAP CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC ATSTTTSTTTSATNPVASLTAPLTGTSSGTSGATNLLAPVTSLVGGLLGGIKK CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNINTISHGTLRTTLIAATVAAMLSLSACGGSGTISKGLDGSGSGSGGGNAISTTGGSGS CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC GGTSGAGGSGSGGSGSSGSTGGLSGGGGSTSGGGSTSGGGSTSGGTSTSSSINALGTIAG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHEEEECC NTGGIISGAGSTVSGLGTVVGSQTLPGVNPQTTQALGGVVQSLGGAVSALGSGVTSGIGQ CCCCEEECCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGSSTNPIGTTVASTGGVVSQLGGAVTQTGNLVTSLGTGPLAPLAPLTSPLGGAVSTLGN CCCCCCCCCCHHHCCCCHHHHHCCHHHHCCCCCEECCCCCCCCHHHHCCCCHHHHHHHCC TITAGGTTLTTALSTGPVQQLTQTVSSAITPITSMVTGTTQTVGNVTGLGAPVNTLLGTI CEECCCCEEEHHHCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCHHHHHHHH GGGLNQAGALISKTGNNPVTTGLGQTVSATGNTITSVGGLLTGGSGATNPLAPITAAVGG CCCHHHHCHHHCCCCCCCCCCCCCCEECCCCCHHHHHCCEEECCCCCCCCHHHHHHHHHC LTGTLSGVSGATSGTPLAPLTNVVSTVTGALSGATGGATSTSPLAPITGLVSTVTGALSG HHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCC ATGGATGSTSPLAPVTGLVSTVTGALSGATGGTTSTSPLAPVTNLVSTATGALGGATAAP CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCC ATSTTTSTTTSATNPVASLTAPLTGTSSGTSGATNLLAPVTSLVGGLLGGIKK CCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA