| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453958
Identifier: 126453958
GI number: 126453958
Start: 2595391
End: 2596218
Strand: Reverse
Name: 126453958
Synonym: BURPS1106A_2635
Alternate gene names: NA
Gene position: 2596218-2595391 (Counterclockwise)
Preceding gene: 126451566
Following gene: 126453364
Centisome position: 65.09
GC content: 69.32
Gene sequence:
>828_bases TTGAAGGACATCATCCATTTCTCGCATGCGAACGGCTTTCCGGCGTCCACGTATCGGACGATCTTCGCCGAACTGGCGGA CGATTACGAACTGCGCTTCATCGAGCGGATCGGCCATGACCGCCGCTTTCCGGTGACGCGCGACTGGCCGCACCTCGTCG AGCAACTGCTCGACGACATCGGTCGCGCGTACGAGCGGCCCGTGTGGCTCGTCGGCCATTCGCTCGGCGGCTATCTGTCG CTGATGGCGGCGCTCAAGCGCCCGCAATGGGTGCGCGGCGTCGTGATGCTCGATTCGCCCGTGATCGCCGGCTGGCGCAG CAGCGCGCTGCGCGTGAGCCAATGGACGGGGCTCGACGAGCGCCTGTCTCCCGCCGCGGCGACCCGCACCCGGCGCGTCC ATTGGGCGAGCCGCGACGACGCGTGGCGGCATTTCCGCGCGAAGCCCGCGTTCGCGCGCTGGGACGAGCGGATGCTGTCC GATTACATCGACTACGGCATTCCGCAGACGAGTGCGGCGGGCGAGCGCACGCTCGCATTCGATCGGCAGATCGAATACAT GATCTACCGGACATTGCCGCACACGCTCGGCCCGCGTCTTGCGCGCGGCGCGCCCGTGCCGGTCGGCTTTCTCGCCGGCA CGCGCTCGCGCGAAATCCGCCAGATCGGGCTCGCGGCGACGCGCCGGGCCGTGCGCGGCAGGATCGAATGGCTCGAGGGC AGCCACCTCTTTCCGATGGAGCGGCCGCTCGAGACCGCGCGTGCGCTGCAGTGCATGATCAACATGCTGCGCGAGGCGCA AGGCGGCGCCGGCGCGCGGCGCGGATGA
Upstream 100 bases:
>100_bases CGGCGCGCTTGCCGAGCCGGTGCGGTATCGGGACGCGCACCGGCGCTACTGGATGGGCCGTTGACGCGATGCGGAGGCTA CGACAGGGAGACAGCGTCGT
Downstream 100 bases:
>100_bases GCGCGCCGGCGCGCGCCGCGCTGCTCGGTGCGGCTCGGCGAGGTGCGGGAACAGCTGAACGCGGCCGTCGCGCAAGCCGG GCGGCGCGACGGATTTGCAC
Product: hypothetical protein
Products: NA
Alternate protein names: Hydrolase; Alpha/Beta Hydrolase Fold Protein; Alpha/Beta Fold Family Hydrolase; Hydrolases Or Acyltransferases; Hydrolase/Acyltransferase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Superfamily Hydrolase/Acyltransferase; Hydrolase Protein; Alpha/Beta Hydrolase; Hydrolase Alpha/Beta Family; Alpha/Beta Fold Hydrolase; Alpha/Beta Family Hydrolase; Alpha/Beta Hydrolase Fold-Containing Protein; Conserved Hydrolases Or Acyltransferase
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MKDIIHFSHANGFPASTYRTIFAELADDYELRFIERIGHDRRFPVTRDWPHLVEQLLDDIGRAYERPVWLVGHSLGGYLS LMAALKRPQWVRGVVMLDSPVIAGWRSSALRVSQWTGLDERLSPAAATRTRRVHWASRDDAWRHFRAKPAFARWDERMLS DYIDYGIPQTSAAGERTLAFDRQIEYMIYRTLPHTLGPRLARGAPVPVGFLAGTRSREIRQIGLAATRRAVRGRIEWLEG SHLFPMERPLETARALQCMINMLREAQGGAGARRG
Sequences:
>Translated_275_residues MKDIIHFSHANGFPASTYRTIFAELADDYELRFIERIGHDRRFPVTRDWPHLVEQLLDDIGRAYERPVWLVGHSLGGYLS LMAALKRPQWVRGVVMLDSPVIAGWRSSALRVSQWTGLDERLSPAAATRTRRVHWASRDDAWRHFRAKPAFARWDERMLS DYIDYGIPQTSAAGERTLAFDRQIEYMIYRTLPHTLGPRLARGAPVPVGFLAGTRSREIRQIGLAATRRAVRGRIEWLEG SHLFPMERPLETARALQCMINMLREAQGGAGARRG >Mature_275_residues MKDIIHFSHANGFPASTYRTIFAELADDYELRFIERIGHDRRFPVTRDWPHLVEQLLDDIGRAYERPVWLVGHSLGGYLS LMAALKRPQWVRGVVMLDSPVIAGWRSSALRVSQWTGLDERLSPAAATRTRRVHWASRDDAWRHFRAKPAFARWDERMLS DYIDYGIPQTSAAGERTLAFDRQIEYMIYRTLPHTLGPRLARGAPVPVGFLAGTRSREIRQIGLAATRRAVRGRIEWLEG SHLFPMERPLETARALQCMINMLREAQGGAGARRG
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31472; Mature: 31472
Theoretical pI: Translated: 10.82; Mature: 10.82
Prosite motif: PS00120 LIPASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDIIHFSHANGFPASTYRTIFAELADDYELRFIERIGHDRRFPVTRDWPHLVEQLLDDI CCCCEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH GRAYERPVWLVGHSLGGYLSLMAALKRPQWVRGVVMLDSPVIAGWRSSALRVSQWTGLDE HHHHCCCEEEEECCHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCCCEEHHHHCCCHH RLSPAAATRTRRVHWASRDDAWRHFRAKPAFARWDERMLSDYIDYGIPQTSAAGERTLAF HCCCHHHHHHHHEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH DRQIEYMIYRTLPHTLGPRLARGAPVPVGFLAGTRSREIRQIGLAATRRAVRGRIEWLEG HHHHHHHHHHHCCHHHCHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC SHLFPMERPLETARALQCMINMLREAQGGAGARRG CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MKDIIHFSHANGFPASTYRTIFAELADDYELRFIERIGHDRRFPVTRDWPHLVEQLLDDI CCCCEEECCCCCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH GRAYERPVWLVGHSLGGYLSLMAALKRPQWVRGVVMLDSPVIAGWRSSALRVSQWTGLDE HHHHCCCEEEEECCHHHHHHHHHHHCCCHHHEEEEEECCCCCCCCCCCCEEHHHHCCCHH RLSPAAATRTRRVHWASRDDAWRHFRAKPAFARWDERMLSDYIDYGIPQTSAAGERTLAF HCCCHHHHHHHHEEECCCCHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH DRQIEYMIYRTLPHTLGPRLARGAPVPVGFLAGTRSREIRQIGLAATRRAVRGRIEWLEG HHHHHHHHHHHCCHHHCHHHHCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC SHLFPMERPLETARALQCMINMLREAQGGAGARRG CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA