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The map label for this gene is yngK [H]

Identifier: 126453950

GI number: 126453950

Start: 1939481

End: 1941046

Strand: Reverse

Name: yngK [H]

Synonym: BURPS1106A_1973

Alternate gene names: 126453950

Gene position: 1941046-1939481 (Counterclockwise)

Preceding gene: 126451808

Following gene: 126452233

Centisome position: 48.67

GC content: 70.37

Gene sequence:

>1566_bases
ATGCTGTCGACCCGACTTCGCCATCTCGCCGCGGCCGCACTCGTGCTGTCGGCCAGCGCATGCGCGTCATCGCCGCAGGC
CGTGCCCGAAGTCGCGTGCCGGCCGGACGAGACGATGCCCAAGCGTCAGTTCCGCGGCACCTGGATCGCCTCGGTGATCA
ACCTCGACTGGCCGTCGCGCCCGGGCCTGCCGGCCGCCGCGCAGCAGGCCGAGCTGAGCGCGTGGCTCGACGACGCGGTC
CGGATGAACCGCAACGCGGTGATCCTGCAGGTTCGGCCGACCGCGGACGCATTCTGGCCGTCGCCGTTCGAGCCGTGGTC
GAAATATCTGACGGGCGCGCAAGGCGGCGATCCCGGCTACGATCCGCTCGCGTTCGCCGTCGCCGAAGCGCATCGGCGCA
ATCTCGAGCTGCACGCGTGGTTCAATCCGTACCGCGTCGCGATGGACGACCGGCTCGACGCGCTCGTCGCCACGCATCCG
GCGCGCGCGCATCCGGACTGGGTGGTCCGCTACGGCGGCAAGCTGTATTACAACCCCGGCGTGCCCGCCGCGCGCGCGTT
CGTCGTCGACGCGATCATGGACGCGGTCGCCCGCTACGATATCGACGCCGTGCATCTCGACGATTATTTCTACCCGTACC
CGGTCGCGGGCGCGACGTTCGACGACGCCTCGGCTTATGCGCAATACGGCGCGGGTTTCGCGACGCTCGCCGACTGGCGT
CGCGACAACGTCGATCGTCTCGTCGAATCGCTCGCGCGGCGCATCAAGGCCGCGAAACCGTGGGTGAAGTTCGGGATCTC
GCCGTTCGCGGTCTGGCGCAATGCGGCGACCGATCCGCAGGGCTCGCGGACGTCGGCTTCGGTGCAGACCTACGACGACC
TTTACGCGGACACGCGCCGCTGGGTGCGCGAGCGCTGGATCGACTATGTCGTTCCGCAGGCGTACTGGGCGCGGGGCTTC
GCGCCCGCCGATTACGACGAGGTCGTGGCGTGGTGGGCCAACGAAGTGCGCGGGCGCGACGCGCACCTGTACATCGGGCA
GGCGGCGTACAAGGTCGGCACGTCGAATCAATCGCCCGGCTGGTCCGATCCCGACGAGCTGAGCCGCCATCTGGCGTTCA
ATCTCACCGCGCCCGAGGTGAAGGGCGACGTCTACTTCTCGGCGAAGGACGTGCGCGCGGACCGGCTCGGCGCGACGACG
CGCTTGAACCGCACTTGGTATTCGCGCCCGGCGCTCGTGCCCACGATGCCCGCGCTCGGCGGCAACGCGCCGCCGAGCGC
GAAGGCGCTGCGCGCGCAACGCACGCCTGACGGCGTGCGGCTGCAATGGCAGGCGGGCTCGGCCGCGGCGGCGTCGTACG
CGGTCTATCGCCACGCGCTCGGGCGACAGGACATGTGCGCGGACAGCGACGCGCGCCATCTGTTGGCGACGGTTCGGGGC
ACGCAATACGTCGACGTCGCCGCGCGCGCGGATCGCGACTACCGGTACGTGGTCACGGCGCTCGATCGCCTGTGGCACGA
GAGCGAACCCGCGTACGTCGCGATGCCGGCGGCGAAGCCGCGCTGA

Upstream 100 bases:

>100_bases
GCCCGGCCGCGCGCCGCCCGCGCCGGAACTCGGCCGCGGCGCCGCGGTCCCTATTGGGCTTGCTCGTCTGAACGCGCTGA
TCCGTCTCAAGGACTTGTCC

Downstream 100 bases:

>100_bases
CACGCCGCTCGCGCATGCGCGAGCGGCTCGTCAAGTCCTCGCTTGCGCACGCCTTCGCGCGTTCGCATCTTGATGCCGTC
ACGCCTTCGCATAGAGCGTC

Product: putative lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 521; Mature: 521

Protein sequence:

>521_residues
MLSTRLRHLAAAALVLSASACASSPQAVPEVACRPDETMPKRQFRGTWIASVINLDWPSRPGLPAAAQQAELSAWLDDAV
RMNRNAVILQVRPTADAFWPSPFEPWSKYLTGAQGGDPGYDPLAFAVAEAHRRNLELHAWFNPYRVAMDDRLDALVATHP
ARAHPDWVVRYGGKLYYNPGVPAARAFVVDAIMDAVARYDIDAVHLDDYFYPYPVAGATFDDASAYAQYGAGFATLADWR
RDNVDRLVESLARRIKAAKPWVKFGISPFAVWRNAATDPQGSRTSASVQTYDDLYADTRRWVRERWIDYVVPQAYWARGF
APADYDEVVAWWANEVRGRDAHLYIGQAAYKVGTSNQSPGWSDPDELSRHLAFNLTAPEVKGDVYFSAKDVRADRLGATT
RLNRTWYSRPALVPTMPALGGNAPPSAKALRAQRTPDGVRLQWQAGSAAAASYAVYRHALGRQDMCADSDARHLLATVRG
TQYVDVAARADRDYRYVVTALDRLWHESEPAYVAMPAAKPR

Sequences:

>Translated_521_residues
MLSTRLRHLAAAALVLSASACASSPQAVPEVACRPDETMPKRQFRGTWIASVINLDWPSRPGLPAAAQQAELSAWLDDAV
RMNRNAVILQVRPTADAFWPSPFEPWSKYLTGAQGGDPGYDPLAFAVAEAHRRNLELHAWFNPYRVAMDDRLDALVATHP
ARAHPDWVVRYGGKLYYNPGVPAARAFVVDAIMDAVARYDIDAVHLDDYFYPYPVAGATFDDASAYAQYGAGFATLADWR
RDNVDRLVESLARRIKAAKPWVKFGISPFAVWRNAATDPQGSRTSASVQTYDDLYADTRRWVRERWIDYVVPQAYWARGF
APADYDEVVAWWANEVRGRDAHLYIGQAAYKVGTSNQSPGWSDPDELSRHLAFNLTAPEVKGDVYFSAKDVRADRLGATT
RLNRTWYSRPALVPTMPALGGNAPPSAKALRAQRTPDGVRLQWQAGSAAAASYAVYRHALGRQDMCADSDARHLLATVRG
TQYVDVAARADRDYRYVVTALDRLWHESEPAYVAMPAAKPR
>Mature_521_residues
MLSTRLRHLAAAALVLSASACASSPQAVPEVACRPDETMPKRQFRGTWIASVINLDWPSRPGLPAAAQQAELSAWLDDAV
RMNRNAVILQVRPTADAFWPSPFEPWSKYLTGAQGGDPGYDPLAFAVAEAHRRNLELHAWFNPYRVAMDDRLDALVATHP
ARAHPDWVVRYGGKLYYNPGVPAARAFVVDAIMDAVARYDIDAVHLDDYFYPYPVAGATFDDASAYAQYGAGFATLADWR
RDNVDRLVESLARRIKAAKPWVKFGISPFAVWRNAATDPQGSRTSASVQTYDDLYADTRRWVRERWIDYVVPQAYWARGF
APADYDEVVAWWANEVRGRDAHLYIGQAAYKVGTSNQSPGWSDPDELSRHLAFNLTAPEVKGDVYFSAKDVRADRLGATT
RLNRTWYSRPALVPTMPALGGNAPPSAKALRAQRTPDGVRLQWQAGSAAAASYAVYRHALGRQDMCADSDARHLLATVRG
TQYVDVAARADRDYRYVVTALDRLWHESEPAYVAMPAAKPR

Specific function: Unknown

COG id: COG1649

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Attached to the membrane by a lipid anchor (Potential) [C]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0748 family [H]

Homologues:

Organism=Escherichia coli, GI1787767, Length=392, Percent_Identity=39.030612244898, Blast_Score=286, Evalue=3e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003790
- InterPro:   IPR017853 [H]

Pfam domain/function: PF02638 DUF187 [H]

EC number: NA

Molecular weight: Translated: 57917; Mature: 57917

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSTRLRHLAAAALVLSASACASSPQAVPEVACRPDETMPKRQFRGTWIASVINLDWPSR
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCHHEEHEEECCCCCC
PGLPAAAQQAELSAWLDDAVRMNRNAVILQVRPTADAFWPSPFEPWSKYLTGAQGGDPGY
CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCC
DPLAFAVAEAHRRNLELHAWFNPYRVAMDDRLDALVATHPARAHPDWVVRYGGKLYYNPG
CHHHHHHHHHHHCCCEEEEECCCEEEEHHHHHHHHHHCCCCCCCCCEEEEECCEEEECCC
VPAARAFVVDAIMDAVARYDIDAVHLDDYFYPYPVAGATFDDASAYAQYGAGFATLADWR
CCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
RDNVDRLVESLARRIKAAKPWVKFGISPFAVWRNAATDPQGSRTSASVQTYDDLYADTRR
CCCHHHHHHHHHHHHHHCCCHHHHCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
WVRERWIDYVVPQAYWARGFAPADYDEVVAWWANEVRGRDAHLYIGQAAYKVGTSNQSPG
HHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECHHEEECCCCCCCC
WSDPDELSRHLAFNLTAPEVKGDVYFSAKDVRADRLGATTRLNRTWYSRPALVPTMPALG
CCCHHHHHHHEEEECCCCCCCCCEEEEHHHCCHHHCCCHHEECCHHCCCCCCCCCCCCCC
GNAPPSAKALRAQRTPDGVRLQWQAGSAAAASYAVYRHALGRQDMCADSDARHLLATVRG
CCCCCCHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC
TQYVDVAARADRDYRYVVTALDRLWHESEPAYVAMPAAKPR
CEEEEEHHHCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCC
>Mature Secondary Structure
MLSTRLRHLAAAALVLSASACASSPQAVPEVACRPDETMPKRQFRGTWIASVINLDWPSR
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCHHEEHEEECCCCCC
PGLPAAAQQAELSAWLDDAVRMNRNAVILQVRPTADAFWPSPFEPWSKYLTGAQGGDPGY
CCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHCCCCCCCCCC
DPLAFAVAEAHRRNLELHAWFNPYRVAMDDRLDALVATHPARAHPDWVVRYGGKLYYNPG
CHHHHHHHHHHHCCCEEEEECCCEEEEHHHHHHHHHHCCCCCCCCCEEEEECCEEEECCC
VPAARAFVVDAIMDAVARYDIDAVHLDDYFYPYPVAGATFDDASAYAQYGAGFATLADWR
CCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHH
RDNVDRLVESLARRIKAAKPWVKFGISPFAVWRNAATDPQGSRTSASVQTYDDLYADTRR
CCCHHHHHHHHHHHHHHCCCHHHHCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
WVRERWIDYVVPQAYWARGFAPADYDEVVAWWANEVRGRDAHLYIGQAAYKVGTSNQSPG
HHHHHHHHHHCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCEEEEEECHHEEECCCCCCCC
WSDPDELSRHLAFNLTAPEVKGDVYFSAKDVRADRLGATTRLNRTWYSRPALVPTMPALG
CCCHHHHHHHEEEECCCCCCCCCEEEEHHHCCHHHCCCHHEECCHHCCCCCCCCCCCCCC
GNAPPSAKALRAQRTPDGVRLQWQAGSAAAASYAVYRHALGRQDMCADSDARHLLATVRG
CCCCCCHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCC
TQYVDVAARADRDYRYVVTALDRLWHESEPAYVAMPAAKPR
CEEEEEHHHCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]