| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453894
Identifier: 126453894
GI number: 126453894
Start: 2358047
End: 2359462
Strand: Reverse
Name: 126453894
Synonym: BURPS1106A_2391
Alternate gene names: NA
Gene position: 2359462-2358047 (Counterclockwise)
Preceding gene: 126453720
Following gene: 126453350
Centisome position: 59.16
GC content: 69.42
Gene sequence:
>1416_bases ATGCCGGCGGCGATGCGGACCCTGCTCGACGCGGACGACGCGCGCTTTCTGCTGACGCGCACCGGCTTTTCGCCGCCGCC ACGCGCGCTCGCGCGCTTCGTCGGCATGACGCGCGCGCAGGCGCTCGCCGAACTGCTCGACGGCGCCCGCACGCAAAGCG TGACGCCGCCGCCCGACTGGGTGCGCGAGCCGCCGCCGTCGCGCGCGATGCGCGCCGCGTTCTCGCCGGACGAGCGGCGC GCGGAACAACAGCTTCGCAATCGCCGCTACGACGAGCTGCGCGCATGGTGGGTGCGCGAGATGATCGTGACGCCTTCGCC GCTCGCCGAGCGCATGACGCTCTTCTGGCACAACCACTTCGCGTCCGGCCAGGACAAGGTACCGTTTCCGCAAACGATTG CGGCTCAGCATGCGCTGCTGCGCGCCAACGCGCTCGGCAATTTCGGCGCGATGCTGCACGGCGTCGCGAAGGATCCGGCG ATGCTGCAGTATCTCGATGGCGCGAGCAATCGCAAGGGCCGCCCGAACGAGAATTTCGCGCGCGAGGCGATGGAACTTTT CACGCTCGGCGAAGGCCACTATACGCAGCGCGACGTGTCCGAGGCCGCGCGCGCGTACACCGGCTGGGGGCTCGATCCCG ATGCGCTCACGTACGTGTTCCGGCCGAACGTTCACGACGACGGCGTGAAGACCGTGCTCGGCGAAACCGGGCGCTTCGAT GGCGATGCGGTGCTCGACATCCTGCTCGGGCGCCCCGAGACCGCGCGCTTCGTCGTCGCGAAGCTGTGGCGCGAATTCGT CTCCGATGCGCCGGATGCGGGCGAGGTCGAGCGCATCGCCGCGCGCTTGCGGCAGAGCGATTACGACATCCGCGCGGCGC TCACGGAGCTGTTTTCGTCCGACGCATTCTGGGCCGAGCGCAACCGCGGCGTGCTCGTCAAGTCGCCGGCGGAATTCGTG GTCGGCACGGTGAGGCTGTTCGACGTCGATTACACCGATGCCGCGCCGTTCGCGAACACGTTGCGCGCGCTGGGTCAGAA CCTGTTCTATCCGCCGAACGTGAAGGGCTGGCCGGGCGGCGTGAGCTGGATCAACAGCGCGACGCTGCTTGCGCGCAAGC AGTTCGTCGAGCAGATGATGCGCGCGACCGAGGCGCCCGGCATGCGTGCGGCGCCCGTTTCCCGCGACATGGCGGGCCAG CCGGCGCCGACGCGGCGCGGCGCGATGCGCTTCGATCTCGACGCGTGGCTTGCCGCGTACCGGACGAAGCCGCAGGCGCA GCCGGATCTGTCGACGGAGCTGCAACTGCAGCACGCGGTGCTGCCGATTTCGCCGGTCGCGGCGATCGAGGCGGGGGCGA CGAGCGGCGCGTATTTGCAGGCCCTGTTGATGGACCCGGCGTATCAACTGAAGTGA
Upstream 100 bases:
>100_bases CCTCGCGCATCGCGAGCCGGCGTGGCTTGCCTCTTTCGGAGAACGGTCGACGATGAGCGATTCGAGGACGCCCGGGCGGC CCCCGGCGAAGCCGCAGCGG
Downstream 100 bases:
>100_bases AGAACATGAACACGATGACGATGAGATTCCGCGCGATGCGGCGTTGCGCGGGCCGCGTCGAATGCGAAACGAGGAAGGCA GCATGAAACGACGTGATTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 471; Mature: 470
Protein sequence:
>471_residues MPAAMRTLLDADDARFLLTRTGFSPPPRALARFVGMTRAQALAELLDGARTQSVTPPPDWVREPPPSRAMRAAFSPDERR AEQQLRNRRYDELRAWWVREMIVTPSPLAERMTLFWHNHFASGQDKVPFPQTIAAQHALLRANALGNFGAMLHGVAKDPA MLQYLDGASNRKGRPNENFAREAMELFTLGEGHYTQRDVSEAARAYTGWGLDPDALTYVFRPNVHDDGVKTVLGETGRFD GDAVLDILLGRPETARFVVAKLWREFVSDAPDAGEVERIAARLRQSDYDIRAALTELFSSDAFWAERNRGVLVKSPAEFV VGTVRLFDVDYTDAAPFANTLRALGQNLFYPPNVKGWPGGVSWINSATLLARKQFVEQMMRATEAPGMRAAPVSRDMAGQ PAPTRRGAMRFDLDAWLAAYRTKPQAQPDLSTELQLQHAVLPISPVAAIEAGATSGAYLQALLMDPAYQLK
Sequences:
>Translated_471_residues MPAAMRTLLDADDARFLLTRTGFSPPPRALARFVGMTRAQALAELLDGARTQSVTPPPDWVREPPPSRAMRAAFSPDERR AEQQLRNRRYDELRAWWVREMIVTPSPLAERMTLFWHNHFASGQDKVPFPQTIAAQHALLRANALGNFGAMLHGVAKDPA MLQYLDGASNRKGRPNENFAREAMELFTLGEGHYTQRDVSEAARAYTGWGLDPDALTYVFRPNVHDDGVKTVLGETGRFD GDAVLDILLGRPETARFVVAKLWREFVSDAPDAGEVERIAARLRQSDYDIRAALTELFSSDAFWAERNRGVLVKSPAEFV VGTVRLFDVDYTDAAPFANTLRALGQNLFYPPNVKGWPGGVSWINSATLLARKQFVEQMMRATEAPGMRAAPVSRDMAGQ PAPTRRGAMRFDLDAWLAAYRTKPQAQPDLSTELQLQHAVLPISPVAAIEAGATSGAYLQALLMDPAYQLK >Mature_470_residues PAAMRTLLDADDARFLLTRTGFSPPPRALARFVGMTRAQALAELLDGARTQSVTPPPDWVREPPPSRAMRAAFSPDERRA EQQLRNRRYDELRAWWVREMIVTPSPLAERMTLFWHNHFASGQDKVPFPQTIAAQHALLRANALGNFGAMLHGVAKDPAM LQYLDGASNRKGRPNENFAREAMELFTLGEGHYTQRDVSEAARAYTGWGLDPDALTYVFRPNVHDDGVKTVLGETGRFDG DAVLDILLGRPETARFVVAKLWREFVSDAPDAGEVERIAARLRQSDYDIRAALTELFSSDAFWAERNRGVLVKSPAEFVV GTVRLFDVDYTDAAPFANTLRALGQNLFYPPNVKGWPGGVSWINSATLLARKQFVEQMMRATEAPGMRAAPVSRDMAGQP APTRRGAMRFDLDAWLAAYRTKPQAQPDLSTELQLQHAVLPISPVAAIEAGATSGAYLQALLMDPAYQLK
Specific function: Unknown
COG id: COG5267
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52261; Mature: 52130
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAAMRTLLDADDARFLLTRTGFSPPPRALARFVGMTRAQALAELLDGARTQSVTPPPDW CCHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH VREPPPSRAMRAAFSPDERRAEQQLRNRRYDELRAWWVREMIVTPSPLAERMTLFWHNHF CCCCCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC ASGQDKVPFPQTIAAQHALLRANALGNFGAMLHGVAKDPAMLQYLDGASNRKGRPNENFA CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHH REAMELFTLGEGHYTQRDVSEAARAYTGWGLDPDALTYVFRPNVHDDGVKTVLGETGRFD HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHEEEEECCCCCCCHHHHHHCCCCCCC GDAVLDILLGRPETARFVVAKLWREFVSDAPDAGEVERIAARLRQSDYDIRAALTELFSS CHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCC DAFWAERNRGVLVKSPAEFVVGTVRLFDVDYTDAAPFANTLRALGQNLFYPPNVKGWPGG CCCHHHCCCCEEEECCHHHHEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCH VSWINSATLLARKQFVEQMMRATEAPGMRAAPVSRDMAGQPAPTRRGAMRFDLDAWLAAY HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHH RTKPQAQPDLSTELQLQHAVLPISPVAAIEAGATSGAYLQALLMDPAYQLK HCCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHCCHHCCC >Mature Secondary Structure PAAMRTLLDADDARFLLTRTGFSPPPRALARFVGMTRAQALAELLDGARTQSVTPPPDW CHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHH VREPPPSRAMRAAFSPDERRAEQQLRNRRYDELRAWWVREMIVTPSPLAERMTLFWHNHF CCCCCHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHC ASGQDKVPFPQTIAAQHALLRANALGNFGAMLHGVAKDPAMLQYLDGASNRKGRPNENFA CCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCHHHH REAMELFTLGEGHYTQRDVSEAARAYTGWGLDPDALTYVFRPNVHDDGVKTVLGETGRFD HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHEEEEECCCCCCCHHHHHHCCCCCCC GDAVLDILLGRPETARFVVAKLWREFVSDAPDAGEVERIAARLRQSDYDIRAALTELFSS CHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCC DAFWAERNRGVLVKSPAEFVVGTVRLFDVDYTDAAPFANTLRALGQNLFYPPNVKGWPGG CCCHHHCCCCEEEECCHHHHEEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCH VSWINSATLLARKQFVEQMMRATEAPGMRAAPVSRDMAGQPAPTRRGAMRFDLDAWLAAY HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEECHHHHHHHH RTKPQAQPDLSTELQLQHAVLPISPVAAIEAGATSGAYLQALLMDPAYQLK HCCCCCCCCCCHHHHHHHHCCCCCHHHHHHCCCCCHHHHHHHHHCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA