| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is lpxA
Identifier: 126453884
GI number: 126453884
Start: 2433036
End: 2433824
Strand: Reverse
Name: lpxA
Synonym: BURPS1106A_2480
Alternate gene names: 126453884
Gene position: 2433824-2433036 (Counterclockwise)
Preceding gene: 126454169
Following gene: 126454896
Centisome position: 61.02
GC content: 66.16
Gene sequence:
>789_bases ATGAGCAGGATTCACCCCACGGCGATCATCGAGCCGGGCGCGCAGCTCCACGAGACGGTCGAGGTCGGCCCGTACGCGAT CGTCGGTTCGCACGTGACGATCGGCGCGCGCACGACGATCGGCTCGCACAGCGTGATCGAAGGCCATACGACGATCGGCG AAGACAATCGCATCGGCCATTACGCGTCGGTGGGCGGCCGTCCGCAGGACATGAAGTACAAGGACGAGCCGACGCGGCTC GTGATCGGCGATCGCAACACGATCCGCGAATTCACGACGATCCATACGGGCACCGTCCAGGACACGGGCGTCACGACGCT CGGCGACGACAACTGGATCATGGCGTACGTGCACATCGGCCATGACTGCCGTGTCGGCAGCCACGTGATCCTGTCGAGCA ACGCGCAGATGGCGGGGCACGTCGAGATCGGCGATTGGGCGATCGTCGGCGGGATGTCGGGCGTTCACCAGTTCGTGCGA ATCGGCGCGCATTCGATGCTGGGCGGCGCATCGGCGCTCGTGCAGGACATTCCGCCGTTCGTGATCGCGGCGGGCAACAA GGCCGAGCCGCATGGGATCAACGTCGAAGGGCTGCGCCGCCGAGGCTTTTCCCCGGATGCGATCTCCGCGCTGCGCAGCG CGTACCGGATCCTCTACAAGAACAGCCTGTCGCTCGAGGAGGCGAAGGTCCAGCTGAGCGAGCTCGCGCAGGCGGGCGGC GACGGCGATGCGGCGGTGAAGTCGCTCGTCGACTTCGTCGAGTCTTCGCAGCGCGGCATCATTCGCTGA
Upstream 100 bases:
>100_bases GCCGAGCTGATGTGCACGGTCAAGACGGCCGACGCGGCGCCCTGAGCGCGCGGCACGCAAGGCTACGCAACGCGACATAG ACATTGAGAGGCAACGGCGC
Downstream 100 bases:
>100_bases CCGATGGCGTTCCAACTCACACCGCTGCGCGTCGCGCTCGTCGCGGGCGAGCCGTCGGGTGATCTGCTCGGCGCGTCGCT CCTCGGCGGGCTGCATGCGC
Product: UDP-N-acetylglucosamine acyltransferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine acyltransferase
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MSRIHPTAIIEPGAQLHETVEVGPYAIVGSHVTIGARTTIGSHSVIEGHTTIGEDNRIGHYASVGGRPQDMKYKDEPTRL VIGDRNTIREFTTIHTGTVQDTGVTTLGDDNWIMAYVHIGHDCRVGSHVILSSNAQMAGHVEIGDWAIVGGMSGVHQFVR IGAHSMLGGASALVQDIPPFVIAAGNKAEPHGINVEGLRRRGFSPDAISALRSAYRILYKNSLSLEEAKVQLSELAQAGG DGDAAVKSLVDFVESSQRGIIR
Sequences:
>Translated_262_residues MSRIHPTAIIEPGAQLHETVEVGPYAIVGSHVTIGARTTIGSHSVIEGHTTIGEDNRIGHYASVGGRPQDMKYKDEPTRL VIGDRNTIREFTTIHTGTVQDTGVTTLGDDNWIMAYVHIGHDCRVGSHVILSSNAQMAGHVEIGDWAIVGGMSGVHQFVR IGAHSMLGGASALVQDIPPFVIAAGNKAEPHGINVEGLRRRGFSPDAISALRSAYRILYKNSLSLEEAKVQLSELAQAGG DGDAAVKSLVDFVESSQRGIIR >Mature_261_residues SRIHPTAIIEPGAQLHETVEVGPYAIVGSHVTIGARTTIGSHSVIEGHTTIGEDNRIGHYASVGGRPQDMKYKDEPTRLV IGDRNTIREFTTIHTGTVQDTGVTTLGDDNWIMAYVHIGHDCRVGSHVILSSNAQMAGHVEIGDWAIVGGMSGVHQFVRI GAHSMLGGASALVQDIPPFVIAAGNKAEPHGINVEGLRRRGFSPDAISALRSAYRILYKNSLSLEEAKVQLSELAQAGGD GDAAVKSLVDFVESSQRGIIR
Specific function: Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
COG id: COG1043
COG function: function code M; Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family. LpxA subfamily
Homologues:
Organism=Escherichia coli, GI1786378, Length=259, Percent_Identity=52.8957528957529, Blast_Score=289, Evalue=1e-79,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LPXA_BURM7 (A3MKT0)
Other databases:
- EMBL: CP000548 - RefSeq: YP_001080866.1 - ProteinModelPortal: A3MKT0 - SMR: A3MKT0 - GeneID: 4894294 - GenomeReviews: CP000548_GR - KEGG: bmn:BMA10247_1315 - TIGR: BMA10247_1315 - HOGENOM: HBG659295 - OMA: DLKYQGE - ProtClustDB: PRK05289 - BioCyc: BMAL320389:BMA10247_1315-MONOMER - GO: GO:0005737 - HAMAP: MF_00387 - InterPro: IPR010137 - InterPro: IPR011004 - PIRSF: PIRSF000456 - TIGRFAMs: TIGR01852
Pfam domain/function: SSF51161 Trimer_LpxA_like
EC number: =2.3.1.129
Molecular weight: Translated: 27942; Mature: 27811
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRIHPTAIIEPGAQLHETVEVGPYAIVGSHVTIGARTTIGSHSVIEGHTTIGEDNRIGH CCCCCCCEEECCCHHHHHHHCCCCEEEECCEEEEEEEEECCCCCEEECCCCCCCCCCCCC YASVGGRPQDMKYKDEPTRLVIGDRNTIREFTTIHTGTVQDTGVTTLGDDNWIMAYVHIG CCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHEEECCCCCCCCCEEECCCCEEEEEEEEC HDCRVGSHVILSSNAQMAGHVEIGDWAIVGGMSGVHQFVRIGAHSMLGGASALVQDIPPF CCCCCCCEEEEECCCCEEEEEEECCEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHCCCE VIAAGNKAEPHGINVEGLRRRGFSPDAISALRSAYRILYKNSLSLEEAKVQLSELAQAGG EEECCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC DGDAAVKSLVDFVESSQRGIIR CHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SRIHPTAIIEPGAQLHETVEVGPYAIVGSHVTIGARTTIGSHSVIEGHTTIGEDNRIGH CCCCCCEEECCCHHHHHHHCCCCEEEECCEEEEEEEEECCCCCEEECCCCCCCCCCCCC YASVGGRPQDMKYKDEPTRLVIGDRNTIREFTTIHTGTVQDTGVTTLGDDNWIMAYVHIG CCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHEEECCCCCCCCCEEECCCCEEEEEEEEC HDCRVGSHVILSSNAQMAGHVEIGDWAIVGGMSGVHQFVRIGAHSMLGGASALVQDIPPF CCCCCCCEEEEECCCCEEEEEEECCEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHCCCE VIAAGNKAEPHGINVEGLRRRGFSPDAISALRSAYRILYKNSLSLEEAKVQLSELAQAGG EEECCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC DGDAAVKSLVDFVESSQRGIIR CHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA