| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453861
Identifier: 126453861
GI number: 126453861
Start: 1330859
End: 1332313
Strand: Reverse
Name: 126453861
Synonym: BURPS1106A_1362
Alternate gene names: NA
Gene position: 1332313-1330859 (Counterclockwise)
Preceding gene: 126454781
Following gene: 126455079
Centisome position: 33.4
GC content: 69.35
Gene sequence:
>1455_bases ATGCCTATCACCGCACAACTGCCGCGAACGGCGCTGCTCGACAAGCTCTGGGCCCGGATGAACGAGCGCGGCGATTTCCC GCTGCTGTCGGACGCGCTGCGCGCGACGATGGCCGCGATGAAGAACGACGAGCTCGACTTCACCGCGCTCGTGCGCGTCG TGCTGTCGGACTTCGCGCTGACGCAGAAAGTGCTGCGGCTCGCGAATTCGGCGATGTACATGGCGTTCGGCGGCAACATC ACGACCGTCACGCGCGCGCTGATGGTGCTCGGCATGGACGCCGTCGGCCATCTCGTCGTCGGGCTCAAGCTCGTCGACCA CTTTCATCACAGCGCGCCGCGCCGCATCGACGCGAAGCTCGAACTGAACCGCGCGCTGCTGTCGGGCTGCGTCGCGCGCA AGCTGACCGAGCACGTCGATCTTCGCGCGGGCGAGCAAGCGGTGGTCTGCACGCTGATGCGGCAGGTCGGCAAGCTGCTC GTCGTCTGCTATCTCGACGCGGAATGGGAAGAGATCCGCCGGCGCGCGGCCGAGCATGACGACGACGAGGCCGCGTGCCG CGCGGTGCTCGGCGTCGGCTACGACGAGATCGGCTTCGAGGCGGCATCGCGCTGGCGGCTGCCGGAGCTGATCCGCGCCG GCATGACGCGCTTCGACGCGAACGACGGCGCGCCGCACGAGGTCCAGTGGTTGCGCGCGGTGAGCCACTGCTCGACCGAC GTCGCGACCGCGCTCACGTCGACGCACGCGCAGCAGCGCGACGCGCGGATCGCCGCGCTCGCGCACCGCTTTCACGGCGT GCTCGGCACGGATGCCGACGAGCTCGCCGACATCGCCGCGTCGCTGTCGCGCGAGGAAACGAGCGACACGGTGATGCGCG AGATCGTCGAGCTGCGTGCGAACGCGGACAAGATCGCACGCGGCGCGTCGACGCCGCAGGCGTGCCTCGAGGCCGGCCTT GCCGACCTGCGCGCGCTGCCGTCCGAGCACGTTCTGGGCCCGGTGCTCGCGCTCGCGTCCGAGAGCGTGCTCGCGGGCCT CGCGTTCACGCGCACGGTGATGTTCGTGCGGCACGACGACGGCGTGTTCGCCGCGCGGCTCGGCTTCGGGCCGAACGTCG ACGCGGCGCTCGAACGGTTGCGCTTTCACGAAACGTTCGAGCCGGACGTATTTCATCTCGCGATCACGAACTCGGTCGGC ATCTTCATCGAGCATGCGCGCGATCCGAAGATGACCAAGCGTCTGCCCGCATGGTATCTGGACGCGTTCGACGACGCGCG CGCATTCGTGCTGCTGCCCGTGATCGCGGAGCGCAACGCCGTCGCGCTGCTGTACGGCGACTGGGCGCTCGGCCAGCCGG CGCGCAAGATCACGCCACAGGAAATGGGCGTGCTCAACGAACTCGCGGCCGAGCTCGGGCGCTTCTTTTGCGGCGCGCAG GGCGACGATCGGTAG
Upstream 100 bases:
>100_bases CTGCCGTCCGACGAACTCGCGCAACGCTTCGAGGCGCAGGAGCTCCATCTGCACGCCACCGCATGACGCACGCCGCCGGC TTTCTCAATCACTGATCCGT
Downstream 100 bases:
>100_bases CGTTCGATCGCGCGCGGCACGGCGCGATGGCTTGGCGATATGGCGACACGGGCGCGTAGCGCGACGCAACGGCAACGCCT TTCGCCTTTCGCCTTTCGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Serine/Threonine Protein Kinase; Protein KinaseGAF; GAF-Domain-Containing Protein
Number of amino acids: Translated: 484; Mature: 483
Protein sequence:
>484_residues MPITAQLPRTALLDKLWARMNERGDFPLLSDALRATMAAMKNDELDFTALVRVVLSDFALTQKVLRLANSAMYMAFGGNI TTVTRALMVLGMDAVGHLVVGLKLVDHFHHSAPRRIDAKLELNRALLSGCVARKLTEHVDLRAGEQAVVCTLMRQVGKLL VVCYLDAEWEEIRRRAAEHDDDEAACRAVLGVGYDEIGFEAASRWRLPELIRAGMTRFDANDGAPHEVQWLRAVSHCSTD VATALTSTHAQQRDARIAALAHRFHGVLGTDADELADIAASLSREETSDTVMREIVELRANADKIARGASTPQACLEAGL ADLRALPSEHVLGPVLALASESVLAGLAFTRTVMFVRHDDGVFAARLGFGPNVDAALERLRFHETFEPDVFHLAITNSVG IFIEHARDPKMTKRLPAWYLDAFDDARAFVLLPVIAERNAVALLYGDWALGQPARKITPQEMGVLNELAAELGRFFCGAQ GDDR
Sequences:
>Translated_484_residues MPITAQLPRTALLDKLWARMNERGDFPLLSDALRATMAAMKNDELDFTALVRVVLSDFALTQKVLRLANSAMYMAFGGNI TTVTRALMVLGMDAVGHLVVGLKLVDHFHHSAPRRIDAKLELNRALLSGCVARKLTEHVDLRAGEQAVVCTLMRQVGKLL VVCYLDAEWEEIRRRAAEHDDDEAACRAVLGVGYDEIGFEAASRWRLPELIRAGMTRFDANDGAPHEVQWLRAVSHCSTD VATALTSTHAQQRDARIAALAHRFHGVLGTDADELADIAASLSREETSDTVMREIVELRANADKIARGASTPQACLEAGL ADLRALPSEHVLGPVLALASESVLAGLAFTRTVMFVRHDDGVFAARLGFGPNVDAALERLRFHETFEPDVFHLAITNSVG IFIEHARDPKMTKRLPAWYLDAFDDARAFVLLPVIAERNAVALLYGDWALGQPARKITPQEMGVLNELAAELGRFFCGAQ GDDR >Mature_483_residues PITAQLPRTALLDKLWARMNERGDFPLLSDALRATMAAMKNDELDFTALVRVVLSDFALTQKVLRLANSAMYMAFGGNIT TVTRALMVLGMDAVGHLVVGLKLVDHFHHSAPRRIDAKLELNRALLSGCVARKLTEHVDLRAGEQAVVCTLMRQVGKLLV VCYLDAEWEEIRRRAAEHDDDEAACRAVLGVGYDEIGFEAASRWRLPELIRAGMTRFDANDGAPHEVQWLRAVSHCSTDV ATALTSTHAQQRDARIAALAHRFHGVLGTDADELADIAASLSREETSDTVMREIVELRANADKIARGASTPQACLEAGLA DLRALPSEHVLGPVLALASESVLAGLAFTRTVMFVRHDDGVFAARLGFGPNVDAALERLRFHETFEPDVFHLAITNSVGI FIEHARDPKMTKRLPAWYLDAFDDARAFVLLPVIAERNAVALLYGDWALGQPARKITPQEMGVLNELAAELGRFFCGAQG DDR
Specific function: Unknown
COG id: COG1639
COG function: function code T; Predicted signal transduction protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53129; Mature: 52997
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPITAQLPRTALLDKLWARMNERGDFPLLSDALRATMAAMKNDELDFTALVRVVLSDFAL CCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH TQKVLRLANSAMYMAFGGNITTVTRALMVLGMDAVGHLVVGLKLVDHFHHSAPRRIDAKL HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH ELNRALLSGCVARKLTEHVDLRAGEQAVVCTLMRQVGKLLVVCYLDAEWEEIRRRAAEHD HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHCCCC DDEAACRAVLGVGYDEIGFEAASRWRLPELIRAGMTRFDANDGAPHEVQWLRAVSHCSTD CHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHCHHHCCCCCCCCHHHHHHHHHHHCCHH VATALTSTHAQQRDARIAALAHRFHGVLGTDADELADIAASLSREETSDTVMREIVELRA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NADKIARGASTPQACLEAGLADLRALPSEHVLGPVLALASESVLAGLAFTRTVMFVRHDD CHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECC GVFAARLGFGPNVDAALERLRFHETFEPDVFHLAITNSVGIFIEHARDPKMTKRLPAWYL CEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCCHHHHHCCHHHH DAFDDARAFVLLPVIAERNAVALLYGDWALGQPARKITPQEMGVLNELAAELGRFFCGAQ HHHCCCCEEEEEEEHHCCCEEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCC GDDR CCCC >Mature Secondary Structure PITAQLPRTALLDKLWARMNERGDFPLLSDALRATMAAMKNDELDFTALVRVVLSDFAL CCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH TQKVLRLANSAMYMAFGGNITTVTRALMVLGMDAVGHLVVGLKLVDHFHHSAPRRIDAKL HHHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHH ELNRALLSGCVARKLTEHVDLRAGEQAVVCTLMRQVGKLLVVCYLDAEWEEIRRRAAEHD HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHEEEEEEECCCHHHHHHHHCCCC DDEAACRAVLGVGYDEIGFEAASRWRLPELIRAGMTRFDANDGAPHEVQWLRAVSHCSTD CHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHCHHHCCCCCCCCHHHHHHHHHHHCCHH VATALTSTHAQQRDARIAALAHRFHGVLGTDADELADIAASLSREETSDTVMREIVELRA HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC NADKIARGASTPQACLEAGLADLRALPSEHVLGPVLALASESVLAGLAFTRTVMFVRHDD CHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECC GVFAARLGFGPNVDAALERLRFHETFEPDVFHLAITNSVGIFIEHARDPKMTKRLPAWYL CEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCCHHHHHCCHHHH DAFDDARAFVLLPVIAERNAVALLYGDWALGQPARKITPQEMGVLNELAAELGRFFCGAQ HHHCCCCEEEEEEEHHCCCEEEEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHCCCC GDDR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA