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The map label for this gene is lemA [H]

Identifier: 126453852

GI number: 126453852

Start: 300492

End: 301166

Strand: Direct

Name: lemA [H]

Synonym: BURPS1106A_0326

Alternate gene names: 126453852

Gene position: 300492-301166 (Clockwise)

Preceding gene: 126452252

Following gene: 126454023

Centisome position: 7.53

GC content: 65.48

Gene sequence:

>675_bases
ATGCGATTTCACTCTTCGGCCCCGCGTGCCGCCGCGACGTGGATTCGTCTGATCCGCGCCGCGCTGCTGGCGGCGTTCGC
GCTCACGCTGTCCGGCTGCGGCTACAACGCGATCCAGGTGCAGGACGAGCAGGTGAAGGCGAGTTGGTCCGAGGTGCTGA
ATCAGTATCAGCGCCGCGCGGATCTCGTGCCGAATCTCGTCAACACCGTGAAGGGCTATGCGAACCAGGAGCGCGACGTG
CTCACGCGCGTGACCGAGGCGCGCGCGCAGGTCGGCTCGATTCGCGCGACGCCCGAGCTGCTGTCCGATCCGCAGGCGTT
CGCGAAATTCGACGCCGCGCAAGGGCAGTTGACATCGTCGCTGTCGCGGCTGCTCGTCGTGTCCGAGAACTACCCGCAAC
TGAAATCCGACGCGAACTTCCGCGATCTGCAGGCGCAACTCGAAGGCACCGAGAATCGCATCACGGTCGCGCGCAATCGC
TACATCCGCTCGGTGCAGGCGTACAACACGACGATCCGCTCGTTCCCGAGCAACTTGACCGCGATGGCGTTCGGCTACAA
GGAAAAACCGAACTTCTCGGTCGAGAACGAAGCGCAGATCGCGAAGCCGCCGCGCGTCGATTTCGGAACGTCGTCCGCGC
CCGCGCCGGCGCCCGCGGCCGGAGCGTCGAATTGA

Upstream 100 bases:

>100_bases
ATCGGTTCGAAGCCGGTACGGCGATTCGCGGGCAAGGGCCCGAGACGAGCGGCCGACGACCGGCGCCAGCCTGCCCCGGC
GAACCCAACGGAGGTAGCAG

Downstream 100 bases:

>100_bases
AAGGCTTCCTTCGCGCGGCGTGTTTCGCGGTCCTCACGTTCCTGTCGATCGGCGGCGCGTGCCGCGCCGAGCAGCCGGTG
CCGCCGCTCGCCGCGCGCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MRFHSSAPRAAATWIRLIRAALLAAFALTLSGCGYNAIQVQDEQVKASWSEVLNQYQRRADLVPNLVNTVKGYANQERDV
LTRVTEARAQVGSIRATPELLSDPQAFAKFDAAQGQLTSSLSRLLVVSENYPQLKSDANFRDLQAQLEGTENRITVARNR
YIRSVQAYNTTIRSFPSNLTAMAFGYKEKPNFSVENEAQIAKPPRVDFGTSSAPAPAPAAGASN

Sequences:

>Translated_224_residues
MRFHSSAPRAAATWIRLIRAALLAAFALTLSGCGYNAIQVQDEQVKASWSEVLNQYQRRADLVPNLVNTVKGYANQERDV
LTRVTEARAQVGSIRATPELLSDPQAFAKFDAAQGQLTSSLSRLLVVSENYPQLKSDANFRDLQAQLEGTENRITVARNR
YIRSVQAYNTTIRSFPSNLTAMAFGYKEKPNFSVENEAQIAKPPRVDFGTSSAPAPAPAAGASN
>Mature_224_residues
MRFHSSAPRAAATWIRLIRAALLAAFALTLSGCGYNAIQVQDEQVKASWSEVLNQYQRRADLVPNLVNTVKGYANQERDV
LTRVTEARAQVGSIRATPELLSDPQAFAKFDAAQGQLTSSLSRLLVVSENYPQLKSDANFRDLQAQLEGTENRITVARNR
YIRSVQAYNTTIRSFPSNLTAMAFGYKEKPNFSVENEAQIAKPPRVDFGTSSAPAPAPAAGASN

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 24536; Mature: 24536

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFHSSAPRAAATWIRLIRAALLAAFALTLSGCGYNAIQVQDEQVKASWSEVLNQYQRRA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHH
DLVPNLVNTVKGYANQERDVLTRVTEARAQVGSIRATPELLSDPQAFAKFDAAQGQLTSS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHH
LSRLLVVSENYPQLKSDANFRDLQAQLEGTENRITVARNRYIRSVQAYNTTIRSFPSNLT
HHHHEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCHH
AMAFGYKEKPNFSVENEAQIAKPPRVDFGTSSAPAPAPAAGASN
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MRFHSSAPRAAATWIRLIRAALLAAFALTLSGCGYNAIQVQDEQVKASWSEVLNQYQRRA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHHHHHHH
DLVPNLVNTVKGYANQERDVLTRVTEARAQVGSIRATPELLSDPQAFAKFDAAQGQLTSS
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCHHHHHHHHHHHHHHHHH
LSRLLVVSENYPQLKSDANFRDLQAQLEGTENRITVARNRYIRSVQAYNTTIRSFPSNLT
HHHHEEECCCCCCCCCCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCHH
AMAFGYKEKPNFSVENEAQIAKPPRVDFGTSSAPAPAPAAGASN
HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]