| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453849
Identifier: 126453849
GI number: 126453849
Start: 343440
End: 343742
Strand: Direct
Name: 126453849
Synonym: BURPS1106A_0376
Alternate gene names: NA
Gene position: 343440-343742 (Clockwise)
Preceding gene: 126453316
Following gene: 126454653
Centisome position: 8.61
GC content: 65.02
Gene sequence:
>303_bases ATGATCGATGTCCCGACGCTGCTCACGATCGTGCTGATGGCCTCGTCCACCTACTTGAGCCGGATTCTCGGCTACGTCGC GCTGCGCAACCGCACGCTGAGCCCGCGCATGATGTCGGTGATGGAGAACGTGCCGGGATGCGTGCTGGTGTCGGTGATCG CGCCGGCGTTCGTGTCCGACAAGCCGGCCAATCTGCTCGCGCTCGGCATCACGCTGCTCGCCGCAACCCGCCTGTCGATC CTGCCGACCGTGATCATCGGCATCGTGTCGACCGGCGTGCTGCGCCATCTGCTCGGTCAATGA
Upstream 100 bases:
>100_bases TCGTCGCGGCGGCGACCTACCTGCTCGTGCCGGGCGCGTGGTACGTCGCGGCGGGCGCGCTTGCCGGCCTCGTCGCGGCC GTCGTCTGCGGAGAGCCGGC
Downstream 100 bases:
>100_bases CGAACGCGGACGCGTGCGGGCACGCCGCCGCAGACCGCTGGGTCGACACCGGGCGCGGGCGTCTGTTCGCGCGATGCTGG CCCGCGCCGCATCGCGCGCA
Product: AzlD family protein
Products: NA
Alternate protein names: AzlD Protein; Branched-Chain Amino Acid Transport Protein Family Protein; Transmembrane Amino Acid Transporter Protein
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MIDVPTLLTIVLMASSTYLSRILGYVALRNRTLSPRMMSVMENVPGCVLVSVIAPAFVSDKPANLLALGITLLAATRLSI LPTVIIGIVSTGVLRHLLGQ
Sequences:
>Translated_100_residues MIDVPTLLTIVLMASSTYLSRILGYVALRNRTLSPRMMSVMENVPGCVLVSVIAPAFVSDKPANLLALGITLLAATRLSI LPTVIIGIVSTGVLRHLLGQ >Mature_100_residues MIDVPTLLTIVLMASSTYLSRILGYVALRNRTLSPRMMSVMENVPGCVLVSVIAPAFVSDKPANLLALGITLLAATRLSI LPTVIIGIVSTGVLRHLLGQ
Specific function: Unknown
COG id: COG4541
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10614; Mature: 10614
Theoretical pI: Translated: 10.63; Mature: 10.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDVPTLLTIVLMASSTYLSRILGYVALRNRTLSPRMMSVMENVPGCVLVSVIAPAFVSD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCC KPANLLALGITLLAATRLSILPTVIIGIVSTGVLRHLLGQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MIDVPTLLTIVLMASSTYLSRILGYVALRNRTLSPRMMSVMENVPGCVLVSVIAPAFVSD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHHCCC KPANLLALGITLLAATRLSILPTVIIGIVSTGVLRHLLGQ CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA