| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is pstS [H]
Identifier: 126453830
GI number: 126453830
Start: 1472747
End: 1473775
Strand: Direct
Name: pstS [H]
Synonym: BURPS1106A_1515
Alternate gene names: 126453830
Gene position: 1472747-1473775 (Clockwise)
Preceding gene: 126454506
Following gene: 126452697
Centisome position: 36.93
GC content: 65.11
Gene sequence:
>1029_bases ATGAAATTGATGCAAACCGCGTTCGCCGGTCTCGCCGGCGCGCTTTTCGCGGTCGCCGCACACGCCGACATCACGGGCGC GGGCAGCACCTTCGCCATGCCGATTTACACGAAATGGGCAGCCGACTATCAGCAGTCGGGCGGCGCGAAGGTCAACTATC AGGGCATCGGCTCGTCGGGCGGCCTCAAGCAGATCGTCGCGAAGACGGTCGATTTCGCCGGCTCGGATGCGCCGCTCAAG GATGACGAGCTCGCGAAGGAAGGCCTGTTCCAGTTCCCGACGGTGGTCGGCGGCGTCGTGCCCGTCATCAACGTGCCGGG CGTGAAGGCGGGCGAACTGACGCTGTCGGGCGCGGTGCTCGGCGACATCTATCTCGGCAAGATCAAGAAGTGGAACGATC CGGCCATCGCGGCGCTGAACCCGAAGGTCAAGCTGCCGGATACGGACATCGCGGTCGTGCGCCGCGCGGACGGCTCGGGC ACGAGCTTCATCTGGACGAATTACCTGTCGAAGGTCAACGACGAGTGGAAGTCGAAGGTCGGCGAAGGCACGACGGTCAA CTGGCCGACCGGCACGGGCGGCAAGGGCAACGACGGCGTCGCGGCGTTCGTGCAGCGTCTGCCGGGCGCGATCGGCTATG TCGAGTGGGCGTACGCGAAGAAGAACAACATGGTCTACACCGCGCTGAAGAACTCGACGGGCACGGTGGTCGAGCCGAAG ACGGAGACGTTCAAGGCGGCTGCCGCCGGCGCGAACTGGTCGAAGTCGTTCTACCAGATCCTGACGAACCAGCCGGGCAA GGAAGCGTGGCCGGTCGTCGGCGCGACGTTCGTGCTGCTGCACGCGAAGCAGGACAAGCCGGCACAGGGCGCGGAAACGC TGAAGTTCTTCGACTGGGCGTTCAAGAACGGCGCGAAGGCGGCGGACGATCTGGATTACATCTCGCTGCCGGCGTCGGTC GAGACGGAAATCCGCAAGCAGTGGAAGGTGAAGGTGACGGACGCGGCCGGCAAGGCGGTGGCCGAGTAA
Upstream 100 bases:
>100_bases CGTTACTGTCACATGAGGTTCATCGACTGTCACATTACTGTCATGAGCAGCCCCTAATCTTCGCGGTGCCGTAGTCATCC GCTCACACACTGGAGGTCTC
Downstream 100 bases:
>100_bases GCTTGACGGCAACGTCATAGCGGTTCGCCGCCCGGCTGCACGGCCGGGCGGCGTGTGCGGTGCAGGCGGGCGGCGCAGGC CGCCCGCCATTGAGAAACAG
Product: phosphate ABC transporter, periplasmic phosphate-binding protein PstS
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: PBP [H]
Number of amino acids: Translated: 342; Mature: 342
Protein sequence:
>342_residues MKLMQTAFAGLAGALFAVAAHADITGAGSTFAMPIYTKWAADYQQSGGAKVNYQGIGSSGGLKQIVAKTVDFAGSDAPLK DDELAKEGLFQFPTVVGGVVPVINVPGVKAGELTLSGAVLGDIYLGKIKKWNDPAIAALNPKVKLPDTDIAVVRRADGSG TSFIWTNYLSKVNDEWKSKVGEGTTVNWPTGTGGKGNDGVAAFVQRLPGAIGYVEWAYAKKNNMVYTALKNSTGTVVEPK TETFKAAAAGANWSKSFYQILTNQPGKEAWPVVGATFVLLHAKQDKPAQGAETLKFFDWAFKNGAKAADDLDYISLPASV ETEIRKQWKVKVTDAAGKAVAE
Sequences:
>Translated_342_residues MKLMQTAFAGLAGALFAVAAHADITGAGSTFAMPIYTKWAADYQQSGGAKVNYQGIGSSGGLKQIVAKTVDFAGSDAPLK DDELAKEGLFQFPTVVGGVVPVINVPGVKAGELTLSGAVLGDIYLGKIKKWNDPAIAALNPKVKLPDTDIAVVRRADGSG TSFIWTNYLSKVNDEWKSKVGEGTTVNWPTGTGGKGNDGVAAFVQRLPGAIGYVEWAYAKKNNMVYTALKNSTGTVVEPK TETFKAAAAGANWSKSFYQILTNQPGKEAWPVVGATFVLLHAKQDKPAQGAETLKFFDWAFKNGAKAADDLDYISLPASV ETEIRKQWKVKVTDAAGKAVAE >Mature_342_residues MKLMQTAFAGLAGALFAVAAHADITGAGSTFAMPIYTKWAADYQQSGGAKVNYQGIGSSGGLKQIVAKTVDFAGSDAPLK DDELAKEGLFQFPTVVGGVVPVINVPGVKAGELTLSGAVLGDIYLGKIKKWNDPAIAALNPKVKLPDTDIAVVRRADGSG TSFIWTNYLSKVNDEWKSKVGEGTTVNWPTGTGGKGNDGVAAFVQRLPGAIGYVEWAYAKKNNMVYTALKNSTGTVVEPK TETFKAAAAGANWSKSFYQILTNQPGKEAWPVVGATFVLLHAKQDKPAQGAETLKFFDWAFKNGAKAADDLDYISLPASV ETEIRKQWKVKVTDAAGKAVAE
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
Organism=Escherichia coli, GI2367271, Length=330, Percent_Identity=64.2424242424242, Blast_Score=446, Evalue=1e-127,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005673 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 36156; Mature: 36156
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLMQTAFAGLAGALFAVAAHADITGAGSTFAMPIYTKWAADYQQSGGAKVNYQGIGSSG CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHCCCCEEEEECCCCCC GLKQIVAKTVDFAGSDAPLKDDELAKEGLFQFPTVVGGVVPVINVPGVKAGELTLSGAVL CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEECCEEE GDIYLGKIKKWNDPAIAALNPKVKLPDTDIAVVRRADGSGTSFIWTNYLSKVNDEWKSKV EEEHCCCCCCCCCCEEEEECCCEECCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHC GEGTTVNWPTGTGGKGNDGVAAFVQRLPGAIGYVEWAYAKKNNMVYTALKNSTGTVVEPK CCCCEEECCCCCCCCCCCHHHHHHHHCCCHHCCEEEEEECCCCEEEEEEECCCCCEECCC TETFKAAAAGANWSKSFYQILTNQPGKEAWPVVGATFVLLHAKQDKPAQGAETLKFFDWA HHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHCEEEEEEECCCCCCCCCHHHHHHHHHH FKNGAKAADDLDYISLPASVETEIRKQWKVKVTDAAGKAVAE HCCCCCCCCCCCEEECCCHHHHHHHHCEEEEEECCCCCHHCC >Mature Secondary Structure MKLMQTAFAGLAGALFAVAAHADITGAGSTFAMPIYTKWAADYQQSGGAKVNYQGIGSSG CCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHHHHCCCCEEEEECCCCCC GLKQIVAKTVDFAGSDAPLKDDELAKEGLFQFPTVVGGVVPVINVPGVKAGELTLSGAVL CHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCEEECCEEE GDIYLGKIKKWNDPAIAALNPKVKLPDTDIAVVRRADGSGTSFIWTNYLSKVNDEWKSKV EEEHCCCCCCCCCCEEEEECCCEECCCCCEEEEEECCCCCCEEHHHHHHHHHHHHHHHHC GEGTTVNWPTGTGGKGNDGVAAFVQRLPGAIGYVEWAYAKKNNMVYTALKNSTGTVVEPK CCCCEEECCCCCCCCCCCHHHHHHHHCCCHHCCEEEEEECCCCEEEEEEECCCCCEECCC TETFKAAAAGANWSKSFYQILTNQPGKEAWPVVGATFVLLHAKQDKPAQGAETLKFFDWA HHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCHHCEEEEEEECCCCCCCCCHHHHHHHHHH FKNGAKAADDLDYISLPASVETEIRKQWKVKVTDAAGKAVAE HCCCCCCCCCCCEEECCCHHHHHHHHCEEEEEECCCCCHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6321434; 6365894; 7686882; 9278503; 9298646; 2215649; 9228942; 9671506 [H]