Click here to switch to the map view.

The map label for this gene is imuB [H]

Identifier: 126453811

GI number: 126453811

Start: 488504

End: 489979

Strand: Direct

Name: imuB [H]

Synonym: BURPS1106A_0526

Alternate gene names: 126453811

Gene position: 488504-489979 (Clockwise)

Preceding gene: 126454926

Following gene: 126453110

Centisome position: 12.25

GC content: 76.42

Gene sequence:

>1476_bases
ATGCGCGCCTTGCTCGGCATCCATCTGCCGCGCCTGCCGCTCGACGTGTGCGCGCCGCCGTCGCCTGACGGCGGCAACGG
CTGCGCGGTGCTCGAGCAGGGCGTCGTGCTGATCGCCGATGCGCCCGCGCGCGCGAACGGCGTGCGTGCCGGCATGAAGC
GCGGCGGCGTGCTGACGCTCGCGCCCGGCACGCGGCTCGTCGAACGCGATCCGGCGCGCGAGGCCGACGCGCTGCGCGCG
GTCGCGCTCGCGCTGCTGCGCTTCTCGCCGTGCGTCGCGCTCGACGACGAAGCGACGCTCGTCGTCGACGTCGGCGCGAG
CCTGCGGCTGTTCGGCGGGCTGCCTTTGCTGTGCCGGCAGGTGCGGGCGACGCTCGCCGCGCTCGGCTATGCGGCGCGCG
TCGCCGCCGCGCCGACGGGGCGCGGCGCGTGGCTGCTCGCGCGTGCGCCGGGCAAGCCGGGCACGCGGCGGCGCGTCGTG
CGGGCGGCGTCGCTCGCGCGCGCGCTCGACGCGCTGCCGTGCGAGCTGCTGCCCGACGCGCGCCCGTACGCCGGCTGGTT
CGACGGCCTCGGCTGCCGCACGCTCGCCGATCTGCGCCGCCTGCCGCGCGCGGGACTCACGCGCCGCTGCGGTCCCGCGC
TCGTCGCCGCGCTCGACCGCGCATACGGCGACGCCGTGGAGCCGCTCGCCTGGATGCCGGTGCCGCCCGTGTTCGACGCG
CGGCTCGAATTGCCGGAGCGCGTCGAATACGCGCAGGCCGTGCTGTTCGTCGCGCGGCGGCTCGTCGTGCAGCTCTGCGG
CTGGCTCGCCGCGCGGCAGTTGTCGCTGTCGGCGATGGTGTTCGCGCTCGAGCACGAGCGCGGCCGCCAGGCGGTGCCGC
CGACGCCGCTCGAGCTCGCGTTCGCCGAGCCCGCGCGCGACGAGACGCATTTCATGCGCGTTCTCGGCGAGCGGCTGGCG
CGCGTTGCGCTACCCGCCGCGGTGATCGCGGTGCGCGTGACGGCGACGCGCGTCGAATCGGTCGCGCCGCCCGCCGACGA
TCTGTTTCCCGAGCCGGGCGGCACCCGCGAGGCGCGCGCGCGGCTCGTGGAGCTTCTGAGCGCGCGGCTCGGCGCGGACA
ACGTGCTGCGCGCGGCGCCCGTCGCCGATTACCGGCCCGAAGCGGCGAACCGCTGGCTGCCGCTCGATGCGCCTACGGGC
AAGCCGGTCGCGCCGGGCGTCGCGCCGCCGCGTCCCGCATGGCTGCTCGCGCCGCCGCAGCCGCTCGCGATGCGCGGGAA
CCGGCCGTTCTACCGCACGCCGCTCAGGTTCGTGTCGTCGATCGAGCGGATCGAGGCCGGCTGGTTCGACGGCCAGCTCG
TCGAGCGCGACTATCGCATCGCGCAGGATGACTACGGCGCGTGCTACTGGATCTACCAGGAGCGCGGCAACCGCGCGGCG
GGGCAATGCTGGTTCCTGCACGGCCTGTTCGGGTGA

Upstream 100 bases:

>100_bases
TCGCCGGGCGGCGTGTCGGTCGAGATCGTCAAGCGCCGCGGGCCGGCGCGCGGCGAGCCGCTTGCGCTCGAATTGCCGTC
GCCCATCGTGGAGAGCCGCT

Downstream 100 bases:

>100_bases
GCGGCATGGATGCGGCATCCGGAATCCTGCCCGACTACGCGGAGCTGTTCTGCCGGTCGAACTTCTCGTTCCTGCACGGC
GCGTCGTCGGCGGAAGAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 491; Mature: 491

Protein sequence:

>491_residues
MRALLGIHLPRLPLDVCAPPSPDGGNGCAVLEQGVVLIADAPARANGVRAGMKRGGVLTLAPGTRLVERDPAREADALRA
VALALLRFSPCVALDDEATLVVDVGASLRLFGGLPLLCRQVRATLAALGYAARVAAAPTGRGAWLLARAPGKPGTRRRVV
RAASLARALDALPCELLPDARPYAGWFDGLGCRTLADLRRLPRAGLTRRCGPALVAALDRAYGDAVEPLAWMPVPPVFDA
RLELPERVEYAQAVLFVARRLVVQLCGWLAARQLSLSAMVFALEHERGRQAVPPTPLELAFAEPARDETHFMRVLGERLA
RVALPAAVIAVRVTATRVESVAPPADDLFPEPGGTREARARLVELLSARLGADNVLRAAPVADYRPEAANRWLPLDAPTG
KPVAPGVAPPRPAWLLAPPQPLAMRGNRPFYRTPLRFVSSIERIEAGWFDGQLVERDYRIAQDDYGACYWIYQERGNRAA
GQCWFLHGLFG

Sequences:

>Translated_491_residues
MRALLGIHLPRLPLDVCAPPSPDGGNGCAVLEQGVVLIADAPARANGVRAGMKRGGVLTLAPGTRLVERDPAREADALRA
VALALLRFSPCVALDDEATLVVDVGASLRLFGGLPLLCRQVRATLAALGYAARVAAAPTGRGAWLLARAPGKPGTRRRVV
RAASLARALDALPCELLPDARPYAGWFDGLGCRTLADLRRLPRAGLTRRCGPALVAALDRAYGDAVEPLAWMPVPPVFDA
RLELPERVEYAQAVLFVARRLVVQLCGWLAARQLSLSAMVFALEHERGRQAVPPTPLELAFAEPARDETHFMRVLGERLA
RVALPAAVIAVRVTATRVESVAPPADDLFPEPGGTREARARLVELLSARLGADNVLRAAPVADYRPEAANRWLPLDAPTG
KPVAPGVAPPRPAWLLAPPQPLAMRGNRPFYRTPLRFVSSIERIEAGWFDGQLVERDYRIAQDDYGACYWIYQERGNRAA
GQCWFLHGLFG
>Mature_491_residues
MRALLGIHLPRLPLDVCAPPSPDGGNGCAVLEQGVVLIADAPARANGVRAGMKRGGVLTLAPGTRLVERDPAREADALRA
VALALLRFSPCVALDDEATLVVDVGASLRLFGGLPLLCRQVRATLAALGYAARVAAAPTGRGAWLLARAPGKPGTRRRVV
RAASLARALDALPCELLPDARPYAGWFDGLGCRTLADLRRLPRAGLTRRCGPALVAALDRAYGDAVEPLAWMPVPPVFDA
RLELPERVEYAQAVLFVARRLVVQLCGWLAARQLSLSAMVFALEHERGRQAVPPTPLELAFAEPARDETHFMRVLGERLA
RVALPAAVIAVRVTATRVESVAPPADDLFPEPGGTREARARLVELLSARLGADNVLRAAPVADYRPEAANRWLPLDAPTG
KPVAPGVAPPRPAWLLAPPQPLAMRGNRPFYRTPLRFVSSIERIEAGWFDGQLVERDYRIAQDDYGACYWIYQERGNRAA
GQCWFLHGLFG

Specific function: Along with dnaE2 and imuA is required for the error- prone processing of DNA lesions [H]

COG id: COG0389

COG function: function code L; Nucleotidyltransferase/DNA polymerase involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001126 [H]

Pfam domain/function: PF00817 IMS [H]

EC number: NA

Molecular weight: Translated: 52969; Mature: 52969

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRALLGIHLPRLPLDVCAPPSPDGGNGCAVLEQGVVLIADAPARANGVRAGMKRGGVLTL
CCCCCCCCCCCCCHHHCCCCCCCCCCCCEEECCCEEEEECCCCCCCHHHHHHHCCCEEEE
APGTRLVERDPAREADALRAVALALLRFSPCVALDDEATLVVDVGASLRLFGGLPLLCRQ
CCCCCHHCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCEEEEECCCCHHHHCCHHHHHHH
VRATLAALGYAARVAAAPTGRGAWLLARAPGKPGTRRRVVRAASLARALDALPCELLPDA
HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCC
RPYAGWFDGLGCRTLADLRRLPRAGLTRRCGPALVAALDRAYGDAVEPLAWMPVPPVFDA
CCCCCHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
RLELPERVEYAQAVLFVARRLVVQLCGWLAARQLSLSAMVFALEHERGRQAVPPTPLELA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
FAEPARDETHFMRVLGERLARVALPAAVIAVRVTATRVESVAPPADDLFPEPGGTREARA
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHH
RLVELLSARLGADNVLRAAPVADYRPEAANRWLPLDAPTGKPVAPGVAPPRPAWLLAPPQ
HHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEECCCC
PLAMRGNRPFYRTPLRFVSSIERIEAGWFDGQLVERDYRIAQDDYGACYWIYQERGNRAA
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCEEEEEECCCCCCC
GQCWFLHGLFG
CCEEEECCCCC
>Mature Secondary Structure
MRALLGIHLPRLPLDVCAPPSPDGGNGCAVLEQGVVLIADAPARANGVRAGMKRGGVLTL
CCCCCCCCCCCCCHHHCCCCCCCCCCCCEEECCCEEEEECCCCCCCHHHHHHHCCCEEEE
APGTRLVERDPAREADALRAVALALLRFSPCVALDDEATLVVDVGASLRLFGGLPLLCRQ
CCCCCHHCCCCCHHHHHHHHHHHHHHHHCCCEEECCCCEEEEECCCCHHHHCCHHHHHHH
VRATLAALGYAARVAAAPTGRGAWLLARAPGKPGTRRRVVRAASLARALDALPCELLPDA
HHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHCCCC
RPYAGWFDGLGCRTLADLRRLPRAGLTRRCGPALVAALDRAYGDAVEPLAWMPVPPVFDA
CCCCCHHCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
RLELPERVEYAQAVLFVARRLVVQLCGWLAARQLSLSAMVFALEHERGRQAVPPTPLELA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEE
FAEPARDETHFMRVLGERLARVALPAAVIAVRVTATRVESVAPPADDLFPEPGGTREARA
ECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCHHHHH
RLVELLSARLGADNVLRAAPVADYRPEAANRWLPLDAPTGKPVAPGVAPPRPAWLLAPPQ
HHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEECCCC
PLAMRGNRPFYRTPLRFVSSIERIEAGWFDGQLVERDYRIAQDDYGACYWIYQERGNRAA
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCCCCEEEEEECCCCCCC
GQCWFLHGLFG
CCEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA