| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453786
Identifier: 126453786
GI number: 126453786
Start: 2179127
End: 2179672
Strand: Reverse
Name: 126453786
Synonym: BURPS1106A_2192
Alternate gene names: NA
Gene position: 2179672-2179127 (Counterclockwise)
Preceding gene: 126452591
Following gene: 126454124
Centisome position: 54.65
GC content: 66.85
Gene sequence:
>546_bases ATGAGTCAACGCATTCTGTCGCCGCTCGTCGCGTCGTGCGCCGCCGCGGCGTTGCTGTCGGCTTTCGCCGCGCATGCGGC GCCGCCCATCAAGGGCAGCGTGCTGGGCGGCAACGACGGCCAGCTTCAATACACGGTCAAGGTCGACTCGAAGCAGTTCG GCACGATGCAGGAGACGCGCAAGATCCGCTCCGGCGAAACCGACGACTACAACTGGAAATCGGTGCCGCCGTCGGGCGCC GTGCCGATGCCCGACGCGTGCCCGAACGCGGATACGCTACCGCGCGACGCGAACGGCGCGATGGTTCGGCAAGCCCAGGT GCGGCTCGCGCCGGCGGTCGACAGCAAGGGCGTCGCGAACGTGCAACTGAGCTTCCAGGCGAGCGCGCCGAGCGGCACGA AGAAGGTCACGGTAAACGGCAAGGCGCTGCAGTGCCCGAATGTCGTGGCGGTGAGCCAGGTCAAATGGCTGTCGATCCCG ACGGGCGGTTCGAAGTCGATCACGATGCGCGACGGCACGAAGATCACGGTGTCGATCAAGCGGTGA
Upstream 100 bases:
>100_bases GCAGGCGCCACGCGCGCCGCTTCGCGTTAGACTGGCATTGCGTCATGCATCGATAACCCGGCGATTCGCGCAGATCGTCG CCATAAAAGGAGAGGTTCGC
Downstream 100 bases:
>100_bases ATGGGGCGCGGCGGCGTTCGCCCGACGCACCGCTGCCGAGGGAGGCGCGACGCATGCCGCCTCGGAAGTCGACGCGCTAC GCGCCTGCCGCGCGTCCCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MSQRILSPLVASCAAAALLSAFAAHAAPPIKGSVLGGNDGQLQYTVKVDSKQFGTMQETRKIRSGETDDYNWKSVPPSGA VPMPDACPNADTLPRDANGAMVRQAQVRLAPAVDSKGVANVQLSFQASAPSGTKKVTVNGKALQCPNVVAVSQVKWLSIP TGGSKSITMRDGTKITVSIKR
Sequences:
>Translated_181_residues MSQRILSPLVASCAAAALLSAFAAHAAPPIKGSVLGGNDGQLQYTVKVDSKQFGTMQETRKIRSGETDDYNWKSVPPSGA VPMPDACPNADTLPRDANGAMVRQAQVRLAPAVDSKGVANVQLSFQASAPSGTKKVTVNGKALQCPNVVAVSQVKWLSIP TGGSKSITMRDGTKITVSIKR >Mature_180_residues SQRILSPLVASCAAAALLSAFAAHAAPPIKGSVLGGNDGQLQYTVKVDSKQFGTMQETRKIRSGETDDYNWKSVPPSGAV PMPDACPNADTLPRDANGAMVRQAQVRLAPAVDSKGVANVQLSFQASAPSGTKKVTVNGKALQCPNVVAVSQVKWLSIPT GGSKSITMRDGTKITVSIKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18876; Mature: 18745
Theoretical pI: Translated: 10.52; Mature: 10.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQRILSPLVASCAAAALLSAFAAHAAPPIKGSVLGGNDGQLQYTVKVDSKQFGTMQETR CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEEECCCCCCCHHHHH KIRSGETDDYNWKSVPPSGAVPMPDACPNADTLPRDANGAMVRQAQVRLAPAVDSKGVAN HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEE VQLSFQASAPSGTKKVTVNGKALQCPNVVAVSQVKWLSIPTGGSKSITMRDGTKITVSIK EEEEEEECCCCCCEEEEECCCEEECCCEEEECEEEEEEECCCCCCEEEEECCCEEEEEEE R C >Mature Secondary Structure SQRILSPLVASCAAAALLSAFAAHAAPPIKGSVLGGNDGQLQYTVKVDSKQFGTMQETR CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEEEECCCCCCCHHHHH KIRSGETDDYNWKSVPPSGAVPMPDACPNADTLPRDANGAMVRQAQVRLAPAVDSKGVAN HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCEE VQLSFQASAPSGTKKVTVNGKALQCPNVVAVSQVKWLSIPTGGSKSITMRDGTKITVSIK EEEEEEECCCCCCEEEEECCCEEECCCEEEECEEEEEEECCCCCCEEEEECCCEEEEEEE R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA