Click here to switch to the map view.

The map label for this gene is fliY [H]

Identifier: 126453748

GI number: 126453748

Start: 2986650

End: 2987612

Strand: Direct

Name: fliY [H]

Synonym: BURPS1106A_3056

Alternate gene names: 126453748

Gene position: 2986650-2987612 (Clockwise)

Preceding gene: 126455435

Following gene: 126454206

Centisome position: 74.88

GC content: 67.71

Gene sequence:

>963_bases
TTGGCGAAATTAAGCTTGCCGTCACGCGATACGCATTTGCAGCGTGTCGAACGGCGCGCTCGCCGCGCGCCTGCCGATCA
TGCGGCAGACGCGGCGAGCGCGGCGGACATGACGAAGCGGCCTCGAAATCGCCCGCTCGGTTTTCCCCCACGGAGATCAA
AGATGAAGGCATTCAAACCGATGTTCACGTCAGCACTCGTCGCCGCGCTGCTCGGCGTCGCGGCCGCGTCCGCGCACGCG
GCCGACCTGCTCGACAGCGTCAAGCAGGCCGGCGTGCTGAAGATCGCGCTCGAAGGCACCTACCCTCCGTTCGACTACCG
CAACGGCGACGGCCAGCTCGAAGGCTTCGACGTCGACGTCGCGAAGGAAGTCGCCGCCCGGCTCGGCGTGAAGCCGCAAT
TCGTCACGACCGAGTGGAGCGGAATTCTCGCGGGCCTGCAGGCGGGCAAGTTCGACGTGATCGTCAACCAGGTCGGCATC
ACGCCCGCGCGCCGGCAGGCGCTCGACTTCAGCCAGCCGTACGTGTACTCGGCCGCGCAGCTGATCCAGCGCGCCGACGA
CAAGCACGACTACGGCGCGCCGGGCGCGCTGCAGGGCAAGCGCATCGGCGTCACGCTCGGCACCAACTTCGCCGATCTCG
CGAAGACGCTGCAGGGCGTCGACGTGAAGACCTATCCGGGCGCGCCGGAGAAACTGCGCGACGTCGCCGCTGGCCGCATC
GACGTCAGCATGGACGACCGGCTGATGCTGCCGTACCTGATCAAGAACGCGCACATGCCGCTGCGGCCCGGCGCGACGAT
CAACGGCGGCGAGACGCAGATGGGCATCCCGTTCCGCAAGGGCAACCCGAAGTTCGCGAAGGCGCTCGACGACGCGCTCG
CGTCGATGCGCGCGGACGGCACGCTCAAGAAGATCTCGGTGCACTGGTTCGGCGTCGACACGTCGGTCCCGAGCGCGCAG
TAA

Upstream 100 bases:

>100_bases
GTTGCGCTCATAGCAGCGCACGTGCGCAACCCGCGCGAACGATAGAAAAACTTTCCACGCGGCGCTGTAAATCCGTACTT
CTTTGGAAACATTTTCCATT

Downstream 100 bases:

>100_bases
CCGGGCGAACCCCGCCGCCCGCTCCCGCGCGCGGCGGCGCGCATGCCGCCGCCGGCGCGCGCCCCAACGATCTGGAGACA
AGTTCATGCAAGCGTTCGAT

Product: polar amino acid ABC transporter periplasmic amino acid-binding protein

Products: NA

Alternate protein names: CBP; Protein fliY; Sulfate starvation-induced protein 7; SSI7 [H]

Number of amino acids: Translated: 320; Mature: 319

Protein sequence:

>320_residues
MAKLSLPSRDTHLQRVERRARRAPADHAADAASAADMTKRPRNRPLGFPPRRSKMKAFKPMFTSALVAALLGVAAASAHA
ADLLDSVKQAGVLKIALEGTYPPFDYRNGDGQLEGFDVDVAKEVAARLGVKPQFVTTEWSGILAGLQAGKFDVIVNQVGI
TPARRQALDFSQPYVYSAAQLIQRADDKHDYGAPGALQGKRIGVTLGTNFADLAKTLQGVDVKTYPGAPEKLRDVAAGRI
DVSMDDRLMLPYLIKNAHMPLRPGATINGGETQMGIPFRKGNPKFAKALDDALASMRADGTLKKISVHWFGVDTSVPSAQ

Sequences:

>Translated_320_residues
MAKLSLPSRDTHLQRVERRARRAPADHAADAASAADMTKRPRNRPLGFPPRRSKMKAFKPMFTSALVAALLGVAAASAHA
ADLLDSVKQAGVLKIALEGTYPPFDYRNGDGQLEGFDVDVAKEVAARLGVKPQFVTTEWSGILAGLQAGKFDVIVNQVGI
TPARRQALDFSQPYVYSAAQLIQRADDKHDYGAPGALQGKRIGVTLGTNFADLAKTLQGVDVKTYPGAPEKLRDVAAGRI
DVSMDDRLMLPYLIKNAHMPLRPGATINGGETQMGIPFRKGNPKFAKALDDALASMRADGTLKKISVHWFGVDTSVPSAQ
>Mature_319_residues
AKLSLPSRDTHLQRVERRARRAPADHAADAASAADMTKRPRNRPLGFPPRRSKMKAFKPMFTSALVAALLGVAAASAHAA
DLLDSVKQAGVLKIALEGTYPPFDYRNGDGQLEGFDVDVAKEVAARLGVKPQFVTTEWSGILAGLQAGKFDVIVNQVGIT
PARRQALDFSQPYVYSAAQLIQRADDKHDYGAPGALQGKRIGVTLGTNFADLAKTLQGVDVKTYPGAPEKLRDVAAGRID
VSMDDRLMLPYLIKNAHMPLRPGATINGGETQMGIPFRKGNPKFAKALDDALASMRADGTLKKISVHWFGVDTSVPSAQ

Specific function: Part of a binding-protein-dependent transport system for cystine [H]

COG id: COG0834

COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788228, Length=251, Percent_Identity=40.2390438247012, Blast_Score=190, Evalue=1e-49,
Organism=Escherichia coli, GI1788648, Length=232, Percent_Identity=30.6034482758621, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI1787085, Length=250, Percent_Identity=29.2, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1787031, Length=248, Percent_Identity=29.0322580645161, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1788649, Length=258, Percent_Identity=27.1317829457364, Blast_Score=96, Evalue=4e-21,
Organism=Escherichia coli, GI1787088, Length=252, Percent_Identity=26.984126984127, Blast_Score=91, Evalue=1e-19,

Paralogues:

None

Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015683
- InterPro:   IPR001638
- InterPro:   IPR018313 [H]

Pfam domain/function: PF00497 SBP_bac_3 [H]

EC number: NA

Molecular weight: Translated: 34411; Mature: 34280

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: PS01039 SBP_BACTERIAL_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKLSLPSRDTHLQRVERRARRAPADHAADAASAADMTKRPRNRPLGFPPRRSKMKAFKP
CCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
MFTSALVAALLGVAAASAHAADLLDSVKQAGVLKIALEGTYPPFDYRNGDGQLEGFDVDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCEECCCHHH
AKEVAARLGVKPQFVTTEWSGILAGLQAGKFDVIVNQVGITPARRQALDFSQPYVYSAAQ
HHHHHHHHCCCCEEEECHHHHHHHHHCCCCEEEEEEHHCCCHHHHHHCCCCCCHHHHHHH
LIQRADDKHDYGAPGALQGKRIGVTLGTNFADLAKTLQGVDVKTYPGAPEKLRDVAAGRI
HHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCEEECCCCHHHHHHHHCCEE
DVSMDDRLMLPYLIKNAHMPLRPGATINGGETQMGIPFRKGNPKFAKALDDALASMRADG
EECCCCCCHHHHHHHCCCCCCCCCCEECCCCCEECCCEECCCCHHHHHHHHHHHHHCCCC
TLKKISVHWFGVDTSVPSAQ
CEEEEEEEEEEECCCCCCCC
>Mature Secondary Structure 
AKLSLPSRDTHLQRVERRARRAPADHAADAASAADMTKRPRNRPLGFPPRRSKMKAFKP
CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
MFTSALVAALLGVAAASAHAADLLDSVKQAGVLKIALEGTYPPFDYRNGDGQLEGFDVDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCEECCCHHH
AKEVAARLGVKPQFVTTEWSGILAGLQAGKFDVIVNQVGITPARRQALDFSQPYVYSAAQ
HHHHHHHHCCCCEEEECHHHHHHHHHCCCCEEEEEEHHCCCHHHHHHCCCCCCHHHHHHH
LIQRADDKHDYGAPGALQGKRIGVTLGTNFADLAKTLQGVDVKTYPGAPEKLRDVAAGRI
HHHHCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHCCCEEECCCCHHHHHHHHCCEE
DVSMDDRLMLPYLIKNAHMPLRPGATINGGETQMGIPFRKGNPKFAKALDDALASMRADG
EECCCCCCHHHHHHHCCCCCCCCCCEECCCCCEECCCEECCCCHHHHHHHHHHHHHCCCC
TLKKISVHWFGVDTSVPSAQ
CEEEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]