| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453736
Identifier: 126453736
GI number: 126453736
Start: 2476218
End: 2477198
Strand: Reverse
Name: 126453736
Synonym: BURPS1106A_2518
Alternate gene names: NA
Gene position: 2477198-2476218 (Counterclockwise)
Preceding gene: 126454213
Following gene: 126454538
Centisome position: 62.11
GC content: 73.39
Gene sequence:
>981_bases ATGAGCGCCGCGGCGTCGCCCGTGCCGCCGGTCGCATTGCGCGACGCGGCCGTGCGCGACCTCGCGTGGCTGCTGTCGAG CGCGAGCCTGCTCGCGCCGTCGGCGGGCGCGCCGCTTGCGCAGCCGTGGGCGAGCGTGGCCGACGCGGCGCGCACGGCCG CATGGCTCGCCGCGCTCGACGCGCAGCCGGCGCCGCTCCATGACGCGCTCGCCCACGCTCGCCCGGTCCGCCTCGGCCGT TATGCCGAGTGTCTGCTCGGCTTTTTCGTCGGCCATGCGCCGTCGCTGCGGCTCGTCGCCGCGAATCTGCCGCTGAGATC GAACGGTCGCACGCTCGGCGAGTGCGATTTCCTGATCGAGACCGCACGCGGCGAGCGCCTGCACTGGGAGCTCGCGGTCA AATGCTATCTGTGCGTCGCGACGGCGGGCACCGCGTCGCTCGCCGATTTCGTCGGCCCGAATCTCGCCGACCGCTTCGAC CTCAAGCGTGCGAAGCTCATCGATCATCAACTGCGGCTCACGGCACGCGACGAGTTCGCGTCGCTCGGCCACGCGGGGCC GTGGCGTGCTCAGATGTTCGTGAAGGGGTGGCTGTTCTATCGCGCGGACGACGGCGCGAACGCGGCCGGCGCGGTGGCCG ATCCACCCGAAATCGGCGCCGACCATCCGCGCGGCTTCTGGATCACGCGCGAAGCGTGGCCGAAGTTCGCGCTTGCCGCC GCGCGGCGCGACGTCGCATGGATCGTGCTGCCGCGCCTCGCATGGCTCGCGCCGCGCGCGTTCGACGATGCGGACGTGGC TTGCGGGCGTTGCGTGCCGCTCGCGTCGGACGCGGTGCTTGACGAAGTCGCGCGGCAGTCGGGGCCGTCGCTCGTCGCCG CGCTCGCGCGCGACGCCAGCGGGGGGTGGCGCGAAACCGCGCGCGGCTTCATCGCGCCCGACGATTGGCCACGGCGGGCA AGCGCGTTCGCCGCGCGTTGA
Upstream 100 bases:
>100_bases CGTATCTGCTGCGCAGCCTGCAGGACAAGGCGAAGGCCTGGTCCGATCTGTGTTTGGCGAACGATACCTACCGGAGTGCC GCGCCCGCCGCCGATCCGCC
Downstream 100 bases:
>100_bases CCGGCATCGGCGGGCATTCGATGCACGACGGTTCATGTCGATGCGAGGTGTGTTTCGGCGGAGGCTTCGATCGGGCGCCC GCCGTCCGCCGAGACGGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MSAAASPVPPVALRDAAVRDLAWLLSSASLLAPSAGAPLAQPWASVADAARTAAWLAALDAQPAPLHDALAHARPVRLGR YAECLLGFFVGHAPSLRLVAANLPLRSNGRTLGECDFLIETARGERLHWELAVKCYLCVATAGTASLADFVGPNLADRFD LKRAKLIDHQLRLTARDEFASLGHAGPWRAQMFVKGWLFYRADDGANAAGAVADPPEIGADHPRGFWITREAWPKFALAA ARRDVAWIVLPRLAWLAPRAFDDADVACGRCVPLASDAVLDEVARQSGPSLVAALARDASGGWRETARGFIAPDDWPRRA SAFAAR
Sequences:
>Translated_326_residues MSAAASPVPPVALRDAAVRDLAWLLSSASLLAPSAGAPLAQPWASVADAARTAAWLAALDAQPAPLHDALAHARPVRLGR YAECLLGFFVGHAPSLRLVAANLPLRSNGRTLGECDFLIETARGERLHWELAVKCYLCVATAGTASLADFVGPNLADRFD LKRAKLIDHQLRLTARDEFASLGHAGPWRAQMFVKGWLFYRADDGANAAGAVADPPEIGADHPRGFWITREAWPKFALAA ARRDVAWIVLPRLAWLAPRAFDDADVACGRCVPLASDAVLDEVARQSGPSLVAALARDASGGWRETARGFIAPDDWPRRA SAFAAR >Mature_325_residues SAAASPVPPVALRDAAVRDLAWLLSSASLLAPSAGAPLAQPWASVADAARTAAWLAALDAQPAPLHDALAHARPVRLGRY AECLLGFFVGHAPSLRLVAANLPLRSNGRTLGECDFLIETARGERLHWELAVKCYLCVATAGTASLADFVGPNLADRFDL KRAKLIDHQLRLTARDEFASLGHAGPWRAQMFVKGWLFYRADDGANAAGAVADPPEIGADHPRGFWITREAWPKFALAAA RRDVAWIVLPRLAWLAPRAFDDADVACGRCVPLASDAVLDEVARQSGPSLVAALARDASGGWRETARGFIAPDDWPRRAS AFAAR
Specific function: Unknown
COG id: COG3782
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34857; Mature: 34726
Theoretical pI: Translated: 8.15; Mature: 8.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAASPVPPVALRDAAVRDLAWLLSSASLLAPSAGAPLAQPWASVADAARTAAWLAALD CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC AQPAPLHDALAHARPVRLGRYAECLLGFFVGHAPSLRLVAANLPLRSNGRTLGECDFLIE CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHEEE TARGERLHWELAVKCYLCVATAGTASLADFVGPNLADRFDLKRAKLIDHQLRLTARDEFA CCCCCEEEHHHHEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SLGHAGPWRAQMFVKGWLFYRADDGANAAGAVADPPEIGADHPRGFWITREAWPKFALAA HCCCCCCHHHHHEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCHHHHHHH ARRDVAWIVLPRLAWLAPRAFDDADVACGRCVPLASDAVLDEVARQSGPSLVAALARDAS HHCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCC GGWRETARGFIAPDDWPRRASAFAAR CCHHHHHCCCCCCCCCCHHHHHHCCC >Mature Secondary Structure SAAASPVPPVALRDAAVRDLAWLLSSASLLAPSAGAPLAQPWASVADAARTAAWLAALD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHC AQPAPLHDALAHARPVRLGRYAECLLGFFVGHAPSLRLVAANLPLRSNGRTLGECDFLIE CCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHEEE TARGERLHWELAVKCYLCVATAGTASLADFVGPNLADRFDLKRAKLIDHQLRLTARDEFA CCCCCEEEHHHHEEEEEEEECCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH SLGHAGPWRAQMFVKGWLFYRADDGANAAGAVADPPEIGADHPRGFWITREAWPKFALAA HCCCCCCHHHHHEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEHHHCHHHHHHH ARRDVAWIVLPRLAWLAPRAFDDADVACGRCVPLASDAVLDEVARQSGPSLVAALARDAS HHCCCEEEHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCC GGWRETARGFIAPDDWPRRASAFAAR CCHHHHHCCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA