Click here to switch to the map view.

The map label for this gene is fdx [H]

Identifier: 126453640

GI number: 126453640

Start: 551214

End: 551480

Strand: Direct

Name: fdx [H]

Synonym: BURPS1106A_0581

Alternate gene names: 126453640

Gene position: 551214-551480 (Clockwise)

Preceding gene: 126453101

Following gene: 126453315

Centisome position: 13.82

GC content: 61.05

Gene sequence:

>267_bases
ATGGCTTTGATGATTACCGACGAGTGCATCAATTGCGACGTATGCGAGCCCGAGTGCCCGAACGGCGCGATATCGATGGG
CCCGGAAATCTACGTGATCGATCCGAACAAGTGCACCGAGTGCGTCGGACATTTCGACGAACCGCAGTGCCAGCAGGTGT
GCCCGGTCGAATGCATCCCGCAGGATCCGGGGCGCCCCGAGACGAAGGATCAGCTGATGGCGAAGTATCGCGCGCTGATC
GCCGCCGAGCAGAAGGACGACGCGTGA

Upstream 100 bases:

>100_bases
AGAAGGTGGCCGCGATGGCCCAGGGGCCGTCCGCGTAAGCGCCCGCGCGCGGCGCGCGGCCCGCAGCGGCCGGCCGCGCG
CCGGCGGAAGTGAGACCAGT

Downstream 100 bases:

>100_bases
CGCGCCGCGCGGCGGCGCGGCCCTCGCCCGTTCGCTGAGCGCGGCGGTGCCGGTTCGCCGCGCGCCGCCGTATTGTTCCG
ACGTCGTTCCGATACCGTTC

Product: ferredoxin, 4Fe-4S

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 87

Protein sequence:

>88_residues
MALMITDECINCDVCEPECPNGAISMGPEIYVIDPNKCTECVGHFDEPQCQQVCPVECIPQDPGRPETKDQLMAKYRALI
AAEQKDDA

Sequences:

>Translated_88_residues
MALMITDECINCDVCEPECPNGAISMGPEIYVIDPNKCTECVGHFDEPQCQQVCPVECIPQDPGRPETKDQLMAKYRALI
AAEQKDDA
>Mature_87_residues
ALMITDECINCDVCEPECPNGAISMGPEIYVIDPNKCTECVGHFDEPQCQQVCPVECIPQDPGRPETKDQLMAKYRALIA
AEQKDDA

Specific function: Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions [H]

COG id: COG1145

COG function: function code C; Ferredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

Organism=Escherichia coli, GI1788914, Length=85, Percent_Identity=56.4705882352941, Blast_Score=100, Evalue=1e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9718; Mature: 9587

Theoretical pI: Translated: 3.89; Mature: 3.89

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

10.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
14.8 %Cys+Met (Translated Protein)
10.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
13.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALMITDECINCDVCEPECPNGAISMGPEIYVIDPNKCTECVGHFDEPQCQQVCPVECIP
CEEEECCCCCCCCCCCCCCCCCCEECCCEEEEECCCHHHHHHCCCCCCCCCCCCCCEECC
QDPGRPETKDQLMAKYRALIAAEQKDDA
CCCCCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ALMITDECINCDVCEPECPNGAISMGPEIYVIDPNKCTECVGHFDEPQCQQVCPVECIP
EEEECCCCCCCCCCCCCCCCCCEECCCEEEEECCCHHHHHHCCCCCCCCCCCCCCEECC
QDPGRPETKDQLMAKYRALIAAEQKDDA
CCCCCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8765743; 893371; 8880900 [H]