| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453588
Identifier: 126453588
GI number: 126453588
Start: 3819397
End: 3820497
Strand: Reverse
Name: 126453588
Synonym: BURPS1106A_3913
Alternate gene names: NA
Gene position: 3820497-3819397 (Counterclockwise)
Preceding gene: 126454491
Following gene: 126453227
Centisome position: 95.79
GC content: 72.75
Gene sequence:
>1101_bases ATGACTTCCCGTATCGCCCCGACTCCGTTCGCCGCCCGGTTCGACTTGCGCCTGCCGCTCGTGCAGGCGCCGATGGTCGG CGCGACGACGCCCGCGCTCGTCGCGGCCGCCTCCAACGCCGGTGCGCTCGGCAGCCTCGGCGGCGCGTCGTTCGCGCCGG AGAAGCTTGCCGCCGAAATCGCCGCGGTGCGTGCCGCGACGCGCCGCGCGTTCGCCGTGAACCTGTTCGTGCTGCCCGAC GCGCAGCCGGACGACGCGGCCGTGCGTCGCGCGCTCGACGCGATCGATCCGCTGCGCGCGCGGTTCGGGTTGCCGCCCGG CGCGCCGCTGCCGCGCTACGCGCCGGATTTCCGCGCGCAACTCGATGCGCTCGTCGACGCGCGCGTGCCGGTCGCGAGCT TCACGTTCGGCGTGCTCGACAAGAAAGATGTCGTCCGGCTGCAGGCGGCGGGCACGTATGTGATCGGCACGGCAACGCAT GTCGCCGAGGGCCTCGCGTGGCAGGCGGCGGGCGCCGACGCGATCTGCGCGCAAGGCGCGGAAGCGGGCGGCCATCGCGG CACGTTCATCGGTTCGGCCGAAGACGCGCTCGTCGGCACGATCGCGCTCGTGCCGCAGCTCGTCGACGCGACGAATCTGC CGGTGCTCGCGGCGGGCGGCATCATGGACGGGCGTGGGATCGCCGCCGCGCTCGCGCTCGGCGCGCAAGCCGCGCAGCTC GGCACCGCGTTTCTCACGTGCGCGGAAAGCGCGATTCCCGCGTGCTGGAAAGCGCGTCTGCTCGCGAGCGACGATACGTC GACGTCCGTCACGCGCGCGATCACGGGCCGCCACGCGCGCGGCATCCGCAATGCGCTGATGGCGCAGCTGGCCGGACGGC CCGATTCGGTCGCGCCGTATCCGGTGCAAAACGCGCTGACGCAGGAGCTGCGGCAAACCGCCGCGCGAGCGGGCGACGCC GAGTACTTGTCGTTGTGGTCCGGGCAAGGCGCGCCGCTCGGCAAGCACCGCGATGGCGCGCAAACCACCGCGCAATTGAT CGACGCGCTCGACGCCGAATGGCGCGCTGCGCTTTCGCGCTCCGTTATTTCCCTGGTCTGA
Upstream 100 bases:
>100_bases TAGAGTCGGCTCGTCGAGCATTCGATTCGTCCCGTCTCGTGCATGAACGCGTGCCTGCCTGCACGCGTTCGCCGCACCTC ATCCATTCGAGGATCCCGCC
Downstream 100 bases:
>100_bases TGAATTGGCCGGCGCGACGTGAAAGCGCGCCGGCCGCATTGCCGACACGTTCTGCTCACCGAATTATTTTCGCCGGAAAG CGTTGATTAAAAACATGATT
Product: 2-nitropropane dioxygenase family oxidoreductase
Products: NA
Alternate protein names: Nitroalkane oxidase [H]
Number of amino acids: Translated: 366; Mature: 365
Protein sequence:
>366_residues MTSRIAPTPFAARFDLRLPLVQAPMVGATTPALVAAASNAGALGSLGGASFAPEKLAAEIAAVRAATRRAFAVNLFVLPD AQPDDAAVRRALDAIDPLRARFGLPPGAPLPRYAPDFRAQLDALVDARVPVASFTFGVLDKKDVVRLQAAGTYVIGTATH VAEGLAWQAAGADAICAQGAEAGGHRGTFIGSAEDALVGTIALVPQLVDATNLPVLAAGGIMDGRGIAAALALGAQAAQL GTAFLTCAESAIPACWKARLLASDDTSTSVTRAITGRHARGIRNALMAQLAGRPDSVAPYPVQNALTQELRQTAARAGDA EYLSLWSGQGAPLGKHRDGAQTTAQLIDALDAEWRAALSRSVISLV
Sequences:
>Translated_366_residues MTSRIAPTPFAARFDLRLPLVQAPMVGATTPALVAAASNAGALGSLGGASFAPEKLAAEIAAVRAATRRAFAVNLFVLPD AQPDDAAVRRALDAIDPLRARFGLPPGAPLPRYAPDFRAQLDALVDARVPVASFTFGVLDKKDVVRLQAAGTYVIGTATH VAEGLAWQAAGADAICAQGAEAGGHRGTFIGSAEDALVGTIALVPQLVDATNLPVLAAGGIMDGRGIAAALALGAQAAQL GTAFLTCAESAIPACWKARLLASDDTSTSVTRAITGRHARGIRNALMAQLAGRPDSVAPYPVQNALTQELRQTAARAGDA EYLSLWSGQGAPLGKHRDGAQTTAQLIDALDAEWRAALSRSVISLV >Mature_365_residues TSRIAPTPFAARFDLRLPLVQAPMVGATTPALVAAASNAGALGSLGGASFAPEKLAAEIAAVRAATRRAFAVNLFVLPDA QPDDAAVRRALDAIDPLRARFGLPPGAPLPRYAPDFRAQLDALVDARVPVASFTFGVLDKKDVVRLQAAGTYVIGTATHV AEGLAWQAAGADAICAQGAEAGGHRGTFIGSAEDALVGTIALVPQLVDATNLPVLAAGGIMDGRGIAAALALGAQAAQLG TAFLTCAESAIPACWKARLLASDDTSTSVTRAITGRHARGIRNALMAQLAGRPDSVAPYPVQNALTQELRQTAARAGDAE YLSLWSGQGAPLGKHRDGAQTTAQLIDALDAEWRAALSRSVISLV
Specific function: Catalyzes the oxidation of alkyl nitronates to produce the corresponding carbonyl compounds and nitrites [H]
COG id: COG2070
COG function: function code R; Dioxygenases related to 2-nitropropane dioxygenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nitronate monooxygenase family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6322609, Length=343, Percent_Identity=29.1545189504373, Blast_Score=105, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004136 - InterPro: IPR013785 [H]
Pfam domain/function: PF03060 NPD [H]
EC number: =1.13.12.16 [H]
Molecular weight: Translated: 37488; Mature: 37357
Theoretical pI: Translated: 8.08; Mature: 8.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSRIAPTPFAARFDLRLPLVQAPMVGATTPALVAAASNAGALGSLGGASFAPEKLAAEI CCCCCCCCCCCEEEEEECCHHHCCCCCCCCHHHHEECCCCCCCCCCCCCCCCHHHHHHHH AAVRAATRRAFAVNLFVLPDAQPDDAAVRRALDAIDPLRARFGLPPGAPLPRYAPDFRAQ HHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH LDALVDARVPVASFTFGVLDKKDVVRLQAAGTYVIGTATHVAEGLAWQAAGADAICAQGA HHHHHHCCCCHHHHHHHCCCCCHHEEEEECCCEEEECHHHHHHCCCEECCCCCHHHHCCC EAGGHRGTFIGSAEDALVGTIALVPQLVDATNLPVLAAGGIMDGRGIAAALALGAQAAQL CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHH GTAFLTCAESAIPACWKARLLASDDTSTSVTRAITGRHARGIRNALMAQLAGRPDSVAPY HHHHHHHHHHHCCHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PVQNALTQELRQTAARAGDAEYLSLWSGQGAPLGKHRDGAQTTAQLIDALDAEWRAALSR CHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SVISLV HHHHCC >Mature Secondary Structure TSRIAPTPFAARFDLRLPLVQAPMVGATTPALVAAASNAGALGSLGGASFAPEKLAAEI CCCCCCCCCCEEEEEECCHHHCCCCCCCCHHHHEECCCCCCCCCCCCCCCCHHHHHHHH AAVRAATRRAFAVNLFVLPDAQPDDAAVRRALDAIDPLRARFGLPPGAPLPRYAPDFRAQ HHHHHHHHHEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH LDALVDARVPVASFTFGVLDKKDVVRLQAAGTYVIGTATHVAEGLAWQAAGADAICAQGA HHHHHHCCCCHHHHHHHCCCCCHHEEEEECCCEEEECHHHHHHCCCEECCCCCHHHHCCC EAGGHRGTFIGSAEDALVGTIALVPQLVDATNLPVLAAGGIMDGRGIAAALALGAQAAQL CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHH GTAFLTCAESAIPACWKARLLASDDTSTSVTRAITGRHARGIRNALMAQLAGRPDSVAPY HHHHHHHHHHHCCHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC PVQNALTQELRQTAARAGDAEYLSLWSGQGAPLGKHRDGAQTTAQLIDALDAEWRAALSR CHHHHHHHHHHHHHHHCCCCHHHEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH SVISLV HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA