| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is 126453566
Identifier: 126453566
GI number: 126453566
Start: 1849178
End: 1850209
Strand: Direct
Name: 126453566
Synonym: BURPS1106A_1894
Alternate gene names: NA
Gene position: 1849178-1850209 (Clockwise)
Preceding gene: 126452631
Following gene: 126454167
Centisome position: 46.36
GC content: 73.35
Gene sequence:
>1032_bases ATGAATGAGCGCCGGGCCGCCTTCGCGCGACGCCGCGAGCGCGGCGCGGTCATGCTGTGGTTCGTGCTGTTCCTGCCGGT GCTGCTGCTCTTCGGCGCGTTCGCGATCGACCTGCCGCGCGTGGCCGCCGCGCGCAACGAACTGCAGAACGCGGCGGATG CGGCCGCGCTCGCCGGGGCCGCGTCGCTCGAAGCGGGCGCCGGCGCGCCCGCGTGGGCGGCGGCCGCGAGCGCGGCGGCC GCGGCGCTTTCGCTGAACGCGTCCGACGGCGCGGCGCTATCGAGCGGCGACGTGCAGACGGGCTACTGGAACGTGACGGG CGTGCCCGCCGGGCTCGAGCCGACGACGCTCGCGCCCGGCGAGTACGACGTGCCCGCCGTGCAGGCCACCGTCACGCGCG CGCCGAACCAGAACGGCGGGCCGCTCTCGCTGTTGATGGGCGGCTTGCTCGGTCTCGTCGGCACGCCCGCCGCGGCGACG GCGGTCGCGGTCGCCGGCGCGCCGGCGACGGTCGGCGCGGGCGGGCTCTTTCCGATGGTCATCGATCAATGCGTGCTCGA TCAGTACTGGGACGCGCGGGCGGGCGCGCCGCGCGTGGATCCGACGACGGGCGCGCCGTACGAGTTCCAGGTCGGCAACG GCCGGACGTACGGCGGCACCTGCTATGCCGGCCAGTGGACGACGTTCCTCGTCAACGCGAACGACGTGCCGACCGTGCGA GGCCTGATGGCCCACGGCAACCCGACGCCGCTTTCGATCGGCGACAGCATCTGGATCGAGCCCGGCGTGAAGACCGCGCT CTATTACGACGTGCCGGTCGGCGTGACGGTCGTCGTGCCGGTCGCCACGCAGATCAGCAGCAAGACGTACGTGCCGGTCG TCGCGTTCGCCGCGTTCTACGTCGACGCGTCGGACGGCGCGAACCTGAAGGCGATCACCGGCCACTTCGTCGGCGGCTAC AAGATTCCCGCGAGCGCGAGCGGCATCGGGCCCGCCTACGGCGCGTACGTCGCGCCTCGCCTCGCATACTGA
Upstream 100 bases:
>100_bases AAGGTGACCGTCAGCTACACATATCAGGGCCTCGTGCTCGGCTCCGCGCTGAGCGCGCTGACCGGGCCGATCACGCTGAC GGCCGTGACGGTGATGAACT
Downstream 100 bases:
>100_bases ACGTCCGCGCCGGCCGCCGTCGCGCGCATGCGCGCGACGCGCGGGCCGCGCGTATGCTTCGCGCCGCGTCGCACCGCGTC GTGTCGTGCCGGATCGTGTC
Product: TadE family protein
Products: NA
Alternate protein names: TadE Family Protein
Number of amino acids: Translated: 343; Mature: 343
Protein sequence:
>343_residues MNERRAAFARRRERGAVMLWFVLFLPVLLLFGAFAIDLPRVAAARNELQNAADAAALAGAASLEAGAGAPAWAAAASAAA AALSLNASDGAALSSGDVQTGYWNVTGVPAGLEPTTLAPGEYDVPAVQATVTRAPNQNGGPLSLLMGGLLGLVGTPAAAT AVAVAGAPATVGAGGLFPMVIDQCVLDQYWDARAGAPRVDPTTGAPYEFQVGNGRTYGGTCYAGQWTTFLVNANDVPTVR GLMAHGNPTPLSIGDSIWIEPGVKTALYYDVPVGVTVVVPVATQISSKTYVPVVAFAAFYVDASDGANLKAITGHFVGGY KIPASASGIGPAYGAYVAPRLAY
Sequences:
>Translated_343_residues MNERRAAFARRRERGAVMLWFVLFLPVLLLFGAFAIDLPRVAAARNELQNAADAAALAGAASLEAGAGAPAWAAAASAAA AALSLNASDGAALSSGDVQTGYWNVTGVPAGLEPTTLAPGEYDVPAVQATVTRAPNQNGGPLSLLMGGLLGLVGTPAAAT AVAVAGAPATVGAGGLFPMVIDQCVLDQYWDARAGAPRVDPTTGAPYEFQVGNGRTYGGTCYAGQWTTFLVNANDVPTVR GLMAHGNPTPLSIGDSIWIEPGVKTALYYDVPVGVTVVVPVATQISSKTYVPVVAFAAFYVDASDGANLKAITGHFVGGY KIPASASGIGPAYGAYVAPRLAY >Mature_343_residues MNERRAAFARRRERGAVMLWFVLFLPVLLLFGAFAIDLPRVAAARNELQNAADAAALAGAASLEAGAGAPAWAAAASAAA AALSLNASDGAALSSGDVQTGYWNVTGVPAGLEPTTLAPGEYDVPAVQATVTRAPNQNGGPLSLLMGGLLGLVGTPAAAT AVAVAGAPATVGAGGLFPMVIDQCVLDQYWDARAGAPRVDPTTGAPYEFQVGNGRTYGGTCYAGQWTTFLVNANDVPTVR GLMAHGNPTPLSIGDSIWIEPGVKTALYYDVPVGVTVVVPVATQISSKTYVPVVAFAAFYVDASDGANLKAITGHFVGGY KIPASASGIGPAYGAYVAPRLAY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34798; Mature: 34798
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNERRAAFARRRERGAVMLWFVLFLPVLLLFGAFAIDLPRVAAARNELQNAADAAALAGA CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH ASLEAGAGAPAWAAAASAAAAALSLNASDGAALSSGDVQTGYWNVTGVPAGLEPTTLAPG HHCCCCCCCCHHHHHHHHHHHEEEECCCCCCEECCCCCCCCEEEEECCCCCCCCCEECCC EYDVPAVQATVTRAPNQNGGPLSLLMGGLLGLVGTPAAATAVAVAGAPATVGAGGLFPMV CCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHEEECCCCCCCCCCCHHHHH IDQCVLDQYWDARAGAPRVDPTTGAPYEFQVGNGRTYGGTCYAGQWTTFLVNANDVPTVR HHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCEECCCEEECCCEEEEEEECCCCCHHH GLMAHGNPTPLSIGDSIWIEPGVKTALYYDVPVGVTVVVPVATQISSKTYVPVVAFAAFY HHEECCCCCCEECCCCEEECCCCCEEEEEECCCCEEEEEEEHHHHCCCCCHHHHEEEEHE VDASDGANLKAITGHFVGGYKIPASASGIGPAYGAYVAPRLAY EECCCCCCEEEEEEEEECCEECCCCCCCCCCHHHHHHCCCCCC >Mature Secondary Structure MNERRAAFARRRERGAVMLWFVLFLPVLLLFGAFAIDLPRVAAARNELQNAADAAALAGA CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH ASLEAGAGAPAWAAAASAAAAALSLNASDGAALSSGDVQTGYWNVTGVPAGLEPTTLAPG HHCCCCCCCCHHHHHHHHHHHEEEECCCCCCEECCCCCCCCEEEEECCCCCCCCCEECCC EYDVPAVQATVTRAPNQNGGPLSLLMGGLLGLVGTPAAATAVAVAGAPATVGAGGLFPMV CCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCHHHHHEEECCCCCCCCCCCHHHHH IDQCVLDQYWDARAGAPRVDPTTGAPYEFQVGNGRTYGGTCYAGQWTTFLVNANDVPTVR HHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCEECCCEEECCCEEEEEEECCCCCHHH GLMAHGNPTPLSIGDSIWIEPGVKTALYYDVPVGVTVVVPVATQISSKTYVPVVAFAAFY HHEECCCCCCEECCCCEEECCCCCEEEEEECCCCEEEEEEEHHHHCCCCCHHHHEEEEHE VDASDGANLKAITGHFVGGYKIPASASGIGPAYGAYVAPRLAY EECCCCCCEEEEEEEEECCEECCCCCCCCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA