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The map label for this gene is ydhM [C]

Identifier: 126453521

GI number: 126453521

Start: 2510384

End: 2511298

Strand: Direct

Name: ydhM [C]

Synonym: BURPS1106A_2556

Alternate gene names: 126453521

Gene position: 2510384-2511298 (Clockwise)

Preceding gene: 126455109

Following gene: 126454105

Centisome position: 62.94

GC content: 65.25

Gene sequence:

>915_bases
ATGGGCGTGATTCCGGCTGGGCCCAACTACGCGACATACGGCCGAACGTTCCGCAACACTCGCGGTATCCGAATTCAGTA
CCGTCGGCTGCCCATGCCGCTGCCGTGCGAATCGACACGAATCGACACGAATCGGCCCCCGGACGCCACCGCCCTGCCCG
CATCGCGAACCGGCCGCCTCGGTCGACGTACCGCAAGCGGCGGGCCGAAGCCTGCAAGCGGCGCCCGTTCGATAACGGGC
ACGCCGATCATCGGCGAAGGCCCATTGAATAACGATCGTTATGGTAACGGACGTTATTCTATACTTCCATCGACGTCAAT
CGAACAAAGCTTCGAAACCGAAACGAACATGCGCTATTCACCGAAACACAAGGAAGCCAGCCGGGCGCGCCTCGTCGAGG
CGGGCGCCGCGCTCGCGAAGCGCAACGGCTTCGCGAACACCGGCATGGACGCGCTCACCGCGGCGGCCGGCGTGACGACG
GGCGCGTTCTATTCGCAATTCCGCTCGAAGCCGGAATTTCTGTACGCGATCGTCGAGCACGAGATGTCGAAGGTGCTCGC
GACGGTCGAGAACCGCTCGAAGGATGACCTCGTCGCCACGCTGCGCAGCTATCTGAGCACCGCGCACGCGGATCATCCGG
AGCTCGGCTGCCCGGTGCCTACCCTCGGCGCGGAAATCGCGCGCGCCGACGTCGCGACCCGCAGGATGTTCGAGGATCTG
ATCAAGCGCTTCCAGGCGTCGCTCGCGACCGCGCTGCACGACGACGAAGCGGCATGGACGCTCGGTTGCGCGGCGATCGG
CGCGGTGCTCGTCGCGCGCGCGATGGCGAGCACCGAGCGCCGCAGCGAAGTGCTGCGCTCGGTGCTCGCGTATACGATGC
GATCGTTCGACGCCGACGCACGGAAAAAGAAGTGA

Upstream 100 bases:

>100_bases
CGCGCGTTTTGAAAATCGAACGGCGAATGCGCAGCTTCACGGTCTCGCACCGCGCCCGCGCATCGTTCCGCGGCCCCATT
AAGTTCCTATTTGGAACTTA

Downstream 100 bases:

>100_bases
CGCACGCGCATGCGCGCCGCGCGCCGGCGCGCAAACCGGCCGGGCAACCCCGCGCACGGCCGATTCGGCGCCGCTAGGCG
GCGCCGGCCGCCCCCGTCGC

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Transcriptional Regulator TetR Family; Regulatory Protein TetR

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MGVIPAGPNYATYGRTFRNTRGIRIQYRRLPMPLPCESTRIDTNRPPDATALPASRTGRLGRRTASGGPKPASGARSITG
TPIIGEGPLNNDRYGNGRYSILPSTSIEQSFETETNMRYSPKHKEASRARLVEAGAALAKRNGFANTGMDALTAAAGVTT
GAFYSQFRSKPEFLYAIVEHEMSKVLATVENRSKDDLVATLRSYLSTAHADHPELGCPVPTLGAEIARADVATRRMFEDL
IKRFQASLATALHDDEAAWTLGCAAIGAVLVARAMASTERRSEVLRSVLAYTMRSFDADARKKK

Sequences:

>Translated_304_residues
MGVIPAGPNYATYGRTFRNTRGIRIQYRRLPMPLPCESTRIDTNRPPDATALPASRTGRLGRRTASGGPKPASGARSITG
TPIIGEGPLNNDRYGNGRYSILPSTSIEQSFETETNMRYSPKHKEASRARLVEAGAALAKRNGFANTGMDALTAAAGVTT
GAFYSQFRSKPEFLYAIVEHEMSKVLATVENRSKDDLVATLRSYLSTAHADHPELGCPVPTLGAEIARADVATRRMFEDL
IKRFQASLATALHDDEAAWTLGCAAIGAVLVARAMASTERRSEVLRSVLAYTMRSFDADARKKK
>Mature_303_residues
GVIPAGPNYATYGRTFRNTRGIRIQYRRLPMPLPCESTRIDTNRPPDATALPASRTGRLGRRTASGGPKPASGARSITGT
PIIGEGPLNNDRYGNGRYSILPSTSIEQSFETETNMRYSPKHKEASRARLVEAGAALAKRNGFANTGMDALTAAAGVTTG
AFYSQFRSKPEFLYAIVEHEMSKVLATVENRSKDDLVATLRSYLSTAHADHPELGCPVPTLGAEIARADVATRRMFEDLI
KRFQASLATALHDDEAAWTLGCAAIGAVLVARAMASTERRSEVLRSVLAYTMRSFDADARKKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32982; Mature: 32851

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGVIPAGPNYATYGRTFRNTRGIRIQYRRLPMPLPCESTRIDTNRPPDATALPASRTGRL
CCCCCCCCCCHHHCHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC
GRRTASGGPKPASGARSITGTPIIGEGPLNNDRYGNGRYSILPSTSIEQSFETETNMRYS
CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCC
PKHKEASRARLVEAGAALAKRNGFANTGMDALTAAAGVTTGAFYSQFRSKPEFLYAIVEH
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
EMSKVLATVENRSKDDLVATLRSYLSTAHADHPELGCPVPTLGAEIARADVATRRMFEDL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IKRFQASLATALHDDEAAWTLGCAAIGAVLVARAMASTERRSEVLRSVLAYTMRSFDADA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
RKKK
HCCC
>Mature Secondary Structure 
GVIPAGPNYATYGRTFRNTRGIRIQYRRLPMPLPCESTRIDTNRPPDATALPASRTGRL
CCCCCCCCCHHHCHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCC
GRRTASGGPKPASGARSITGTPIIGEGPLNNDRYGNGRYSILPSTSIEQSFETETNMRYS
CCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCCCC
PKHKEASRARLVEAGAALAKRNGFANTGMDALTAAAGVTTGAFYSQFRSKPEFLYAIVEH
CCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
EMSKVLATVENRSKDDLVATLRSYLSTAHADHPELGCPVPTLGAEIARADVATRRMFEDL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
IKRFQASLATALHDDEAAWTLGCAAIGAVLVARAMASTERRSEVLRSVLAYTMRSFDADA
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
RKKK
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA