Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

Click here to switch to the map view.

The map label for this gene is 126453495

Identifier: 126453495

GI number: 126453495

Start: 3534801

End: 3535304

Strand: Reverse

Name: 126453495

Synonym: BURPS1106A_3634

Alternate gene names: NA

Gene position: 3535304-3534801 (Counterclockwise)

Preceding gene: 126451515

Following gene: 126453052

Centisome position: 88.64

GC content: 69.25

Gene sequence:

>504_bases
ATGCATGCCTGGTACCGTTTCCGCCCGTTCGTTGGACTATGGTTCGCCGCGCTCGCGGTGCTGCTCGCGCTCGGCGGATG
CGCGGCGCTGACCGGGCGGGACCCCGTGCGCGTGAGCGTCGTCGGCATCGAGCCGCTCGTCGGGCAGGGGCTCGAAATGC
GCTTCGACGTGAAGCTGCGGCTGCAGAATCCGAACGATGCGCCGATCGACTACGATGGCGTCGCGCTCGATCTCGAACTG
AACGGCAGGCCGTTCGCGAGCGGCGTGAGCGATGTGCGGGGCACGGTGCCGCGCTTCGGCGAGCAGGTGCTGAGCGTGCC
GGTCACGGTGTCCGCGTTCGCCGCCGCGCGGCAGGCGTTCGGGCTCGCGGATGCAACGGTGTCCGGCAAGCTGCCGTATG
TGTTGCGCGGCAAGCTCGCGGGTGGAATGTTCGGCAGCGTGCGCTTTACCGATTCGGGCACGCTCAGCTTGCCGGCGTCG
GGCGGGTATGGCGGCGGCTATTGA

Upstream 100 bases:

>100_bases
GGGAGTTGCGTGTGAGGCGGCGCGCCGGCGGTTCCCGGTGCGCCGGGCGGGCGCTGGTTAAAATGGCGGTTCCTGCGCCC
CGTTTCGAGGATCGTCGTCC

Downstream 100 bases:

>100_bases
GCGTCGCGCGCGCGGACGGTATGCCGCCGCCGCTTGCCTCGCGCACGCGGCGATCGGCCGCCGTTCGAGGTCGCGGTGCG
TGACGCGCGGCCTCCGTACG

Product: putative lipoprotein

Products: NA

Alternate protein names: Water Stress And Hypersensitive Response Domain Protein; Water Stress/Hypersensitive Response Protein

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MHAWYRFRPFVGLWFAALAVLLALGGCAALTGRDPVRVSVVGIEPLVGQGLEMRFDVKLRLQNPNDAPIDYDGVALDLEL
NGRPFASGVSDVRGTVPRFGEQVLSVPVTVSAFAAARQAFGLADATVSGKLPYVLRGKLAGGMFGSVRFTDSGTLSLPAS
GGYGGGY

Sequences:

>Translated_167_residues
MHAWYRFRPFVGLWFAALAVLLALGGCAALTGRDPVRVSVVGIEPLVGQGLEMRFDVKLRLQNPNDAPIDYDGVALDLEL
NGRPFASGVSDVRGTVPRFGEQVLSVPVTVSAFAAARQAFGLADATVSGKLPYVLRGKLAGGMFGSVRFTDSGTLSLPAS
GGYGGGY
>Mature_167_residues
MHAWYRFRPFVGLWFAALAVLLALGGCAALTGRDPVRVSVVGIEPLVGQGLEMRFDVKLRLQNPNDAPIDYDGVALDLEL
NGRPFASGVSDVRGTVPRFGEQVLSVPVTVSAFAAARQAFGLADATVSGKLPYVLRGKLAGGMFGSVRFTDSGTLSLPAS
GGYGGGY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17519; Mature: 17519

Theoretical pI: Translated: 9.06; Mature: 9.06

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAWYRFRPFVGLWFAALAVLLALGGCAALTGRDPVRVSVVGIEPLVGQGLEMRFDVKLR
CCCCEECCHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEEECCHHHCCCCEEEEEEEEE
LQNPNDAPIDYDGVALDLELNGRPFASGVSDVRGTVPRFGEQVLSVPVTVSAFAAARQAF
EECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHH
GLADATVSGKLPYVLRGKLAGGMFGSVRFTDSGTLSLPASGGYGGGY
CCCCCEECCCCCEEEEEEECCCEEEEEEECCCCCEEECCCCCCCCCC
>Mature Secondary Structure
MHAWYRFRPFVGLWFAALAVLLALGGCAALTGRDPVRVSVVGIEPLVGQGLEMRFDVKLR
CCCCEECCHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEEECCHHHCCCCEEEEEEEEE
LQNPNDAPIDYDGVALDLELNGRPFASGVSDVRGTVPRFGEQVLSVPVTVSAFAAARQAF
EECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHH
GLADATVSGKLPYVLRGKLAGGMFGSVRFTDSGTLSLPASGGYGGGY
CCCCCEECCCCCEEEEEEECCCEEEEEEECCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA