| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453495
Identifier: 126453495
GI number: 126453495
Start: 3534801
End: 3535304
Strand: Reverse
Name: 126453495
Synonym: BURPS1106A_3634
Alternate gene names: NA
Gene position: 3535304-3534801 (Counterclockwise)
Preceding gene: 126451515
Following gene: 126453052
Centisome position: 88.64
GC content: 69.25
Gene sequence:
>504_bases ATGCATGCCTGGTACCGTTTCCGCCCGTTCGTTGGACTATGGTTCGCCGCGCTCGCGGTGCTGCTCGCGCTCGGCGGATG CGCGGCGCTGACCGGGCGGGACCCCGTGCGCGTGAGCGTCGTCGGCATCGAGCCGCTCGTCGGGCAGGGGCTCGAAATGC GCTTCGACGTGAAGCTGCGGCTGCAGAATCCGAACGATGCGCCGATCGACTACGATGGCGTCGCGCTCGATCTCGAACTG AACGGCAGGCCGTTCGCGAGCGGCGTGAGCGATGTGCGGGGCACGGTGCCGCGCTTCGGCGAGCAGGTGCTGAGCGTGCC GGTCACGGTGTCCGCGTTCGCCGCCGCGCGGCAGGCGTTCGGGCTCGCGGATGCAACGGTGTCCGGCAAGCTGCCGTATG TGTTGCGCGGCAAGCTCGCGGGTGGAATGTTCGGCAGCGTGCGCTTTACCGATTCGGGCACGCTCAGCTTGCCGGCGTCG GGCGGGTATGGCGGCGGCTATTGA
Upstream 100 bases:
>100_bases GGGAGTTGCGTGTGAGGCGGCGCGCCGGCGGTTCCCGGTGCGCCGGGCGGGCGCTGGTTAAAATGGCGGTTCCTGCGCCC CGTTTCGAGGATCGTCGTCC
Downstream 100 bases:
>100_bases GCGTCGCGCGCGCGGACGGTATGCCGCCGCCGCTTGCCTCGCGCACGCGGCGATCGGCCGCCGTTCGAGGTCGCGGTGCG TGACGCGCGGCCTCCGTACG
Product: putative lipoprotein
Products: NA
Alternate protein names: Water Stress And Hypersensitive Response Domain Protein; Water Stress/Hypersensitive Response Protein
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MHAWYRFRPFVGLWFAALAVLLALGGCAALTGRDPVRVSVVGIEPLVGQGLEMRFDVKLRLQNPNDAPIDYDGVALDLEL NGRPFASGVSDVRGTVPRFGEQVLSVPVTVSAFAAARQAFGLADATVSGKLPYVLRGKLAGGMFGSVRFTDSGTLSLPAS GGYGGGY
Sequences:
>Translated_167_residues MHAWYRFRPFVGLWFAALAVLLALGGCAALTGRDPVRVSVVGIEPLVGQGLEMRFDVKLRLQNPNDAPIDYDGVALDLEL NGRPFASGVSDVRGTVPRFGEQVLSVPVTVSAFAAARQAFGLADATVSGKLPYVLRGKLAGGMFGSVRFTDSGTLSLPAS GGYGGGY >Mature_167_residues MHAWYRFRPFVGLWFAALAVLLALGGCAALTGRDPVRVSVVGIEPLVGQGLEMRFDVKLRLQNPNDAPIDYDGVALDLEL NGRPFASGVSDVRGTVPRFGEQVLSVPVTVSAFAAARQAFGLADATVSGKLPYVLRGKLAGGMFGSVRFTDSGTLSLPAS GGYGGGY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17519; Mature: 17519
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHAWYRFRPFVGLWFAALAVLLALGGCAALTGRDPVRVSVVGIEPLVGQGLEMRFDVKLR CCCCEECCHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEEECCHHHCCCCEEEEEEEEE LQNPNDAPIDYDGVALDLELNGRPFASGVSDVRGTVPRFGEQVLSVPVTVSAFAAARQAF EECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHH GLADATVSGKLPYVLRGKLAGGMFGSVRFTDSGTLSLPASGGYGGGY CCCCCEECCCCCEEEEEEECCCEEEEEEECCCCCEEECCCCCCCCCC >Mature Secondary Structure MHAWYRFRPFVGLWFAALAVLLALGGCAALTGRDPVRVSVVGIEPLVGQGLEMRFDVKLR CCCCEECCHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEEECCHHHCCCCEEEEEEEEE LQNPNDAPIDYDGVALDLELNGRPFASGVSDVRGTVPRFGEQVLSVPVTVSAFAAARQAF EECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHH GLADATVSGKLPYVLRGKLAGGMFGSVRFTDSGTLSLPASGGYGGGY CCCCCEECCCCCEEEEEEECCCEEEEEEECCCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA