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The map label for this gene is 126453488

Identifier: 126453488

GI number: 126453488

Start: 254176

End: 255135

Strand: Direct

Name: 126453488

Synonym: BURPS1106A_0270

Alternate gene names: NA

Gene position: 254176-255135 (Clockwise)

Preceding gene: 126453322

Following gene: 126454638

Centisome position: 6.37

GC content: 73.54

Gene sequence:

>960_bases
ATGCAGGGCCAAACCATCGCGATGCTCGGCGGCACGGGCTTCATCGGCAGCCGCCTCGTCAATGTGCTCGTCGGCGCCGG
CGCGCACGTGCGTATCGGCGCGCGCCGGCGCGAGCATGCGCGGCATCTCGCGACGCTGCCCGTCGACATCGTCGAGCTGT
CCGCCTTCGACGTGCGCGAGCTCGCCCGTTTCGTCGCGGGCGCGCAGGCGGCCGTCAATCTCGTCGGCGTGCTGCGCGGC
GGGCACGGCAAGCCGTACGGCGAGGGCTTCGAGCGGCTGCACGTCGCGCTGCCCGCGGCGCTCGCCGCCGCATGCATCGA
AGCGCGCGTGCCGCGCATGCTTCACGTGAGCGCGCTCGGTGCCGATCCGCACGCGCCGAGCATGTACCTGCGCTCGAAGG
GCGACGGCGAGATCGCGCTGCGCGCGCAGGCCGCGGCGGGCGCGCTGGACGTCACGATATTCCGGCCGTCGATCGTGTTC
GGCCCGGGCGACGCGTTTGTCAACACGTTCGCGCGGCTTCAGCGGATCTTTCCGGTGCTGCCGCTCGCGATGCCCGACGC
GCTGATGCAGCCGGTCCACGTCGGCGACGTCGCGCAGGCGATCGCGAACGCCTGTGTGCGCGACGCGACGCGCGGCCGGA
CCTACGAGCTCGGCGGGCCGCGCACCTACCGGCTCGAGGAGATCGTCCGCTATGCCGGGCGGCTGATCGGCCGCCCCGCG
CGGATCGTCCGGCTGCCCGACGCGCTCGCGCGGCTGCAGGCGCGCGTGTTCGAGATGCTGCCGGGCGAGCCGCTCGTCTC
GCGCGATAATCTCGCTTCGCTGTCGGTGCCGAGCGTGATGACGGGGCCGATCGCGCCCGAGCTCGGCATCGCGCCCGCGA
GCCTCGAGCACATCGCGCCGACCTACGTCGGCGACGCGGCGCTGCGCTCGCGTTTTTCCGACCGGCGCGCGCGCCGGTAA

Upstream 100 bases:

>100_bases
GCGTGCCGCGCACGCGCTGTCCGGGCGCAGCCGGCCGGCGCTTCGTATCACATTCGCCGCCCGCGCGTCGCGTGGGCGGC
GCGCCTGATGGGGCACGATC

Downstream 100 bases:

>100_bases
GCAGGCGGGCGACCGCGGGCGCCGCGGATCGGCTGGACAATCGACAACTACAGGATGAATCCCATGAAACTCGTGATCGG
AGACAAGAACTACTCGTCGT

Product: NAD-dependent epimerase/dehydratase family protein

Products: NA

Alternate protein names: NADH Dehydrogenase; NADH-Ubiquinone Oxidoreductase; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase; Nucleoside-Diphosphate-Sugar Epimerase; Oxidoreductase; NADH-Ubiquinone Oxidoreductase Subunit; 3-Beta Hydroxysteroid Dehydrogenase/Isomerase Family; NADH-Ubiquinone Oxireductase; DTDP-4-Dehydrorhamnose Reductase; NADH Dehydrogenase/Oxidoreductase-Like Protein; NADH-Ubiquinone Oxidoreductase Family Protein; NmrA Family Protein; NAD-Dependent Epimerase/Dehydratase Family Protein; Nucleoside-Diphosphate Sugar Epimerase; NAD Dependent Epimerase/Dehydratase Family; NAD Dependent Epimerase/Dehydratase Family Protein; 3-Beta-Hydroxy-Delta(5)-Steroid Dehydrogenase; NADH Ubiquinone Oxidoreductase; Oxidoreductase Protein; Epimerase; Male Sterility-Like Protein; Nucleoside-Diphosphate-Sugar Epimerases; NADH Dehydrogenase 1 Alpha Subcomplex; Dehydrogenase; NADH Dehydrogenase/NADH Dehydrogenase Protein; Ubiquinone Dependent NADH Dehydrogenase; NADH Dehydrogenase Subunit; Acyl-CoA Synthetase; Homolog NADH Dehydrogenase; NADH Dehydrogenase-Like Protein; NAD Dependent Epimerase; NADH-Ubiquinone Oxidoreductase -Like Protein; NADH-Ubiquinone Oxidoreductase Putativ; Saccharopine Dehydrogenase; NADH-Quinone Oxidoreductase; Nucleoside-Diphosphate-Sugar Epimerase Protein; NAD Dependent Epimerase/Dehydratase

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MQGQTIAMLGGTGFIGSRLVNVLVGAGAHVRIGARRREHARHLATLPVDIVELSAFDVRELARFVAGAQAAVNLVGVLRG
GHGKPYGEGFERLHVALPAALAAACIEARVPRMLHVSALGADPHAPSMYLRSKGDGEIALRAQAAAGALDVTIFRPSIVF
GPGDAFVNTFARLQRIFPVLPLAMPDALMQPVHVGDVAQAIANACVRDATRGRTYELGGPRTYRLEEIVRYAGRLIGRPA
RIVRLPDALARLQARVFEMLPGEPLVSRDNLASLSVPSVMTGPIAPELGIAPASLEHIAPTYVGDAALRSRFSDRRARR

Sequences:

>Translated_319_residues
MQGQTIAMLGGTGFIGSRLVNVLVGAGAHVRIGARRREHARHLATLPVDIVELSAFDVRELARFVAGAQAAVNLVGVLRG
GHGKPYGEGFERLHVALPAALAAACIEARVPRMLHVSALGADPHAPSMYLRSKGDGEIALRAQAAAGALDVTIFRPSIVF
GPGDAFVNTFARLQRIFPVLPLAMPDALMQPVHVGDVAQAIANACVRDATRGRTYELGGPRTYRLEEIVRYAGRLIGRPA
RIVRLPDALARLQARVFEMLPGEPLVSRDNLASLSVPSVMTGPIAPELGIAPASLEHIAPTYVGDAALRSRFSDRRARR
>Mature_319_residues
MQGQTIAMLGGTGFIGSRLVNVLVGAGAHVRIGARRREHARHLATLPVDIVELSAFDVRELARFVAGAQAAVNLVGVLRG
GHGKPYGEGFERLHVALPAALAAACIEARVPRMLHVSALGADPHAPSMYLRSKGDGEIALRAQAAAGALDVTIFRPSIVF
GPGDAFVNTFARLQRIFPVLPLAMPDALMQPVHVGDVAQAIANACVRDATRGRTYELGGPRTYRLEEIVRYAGRLIGRPA
RIVRLPDALARLQARVFEMLPGEPLVSRDNLASLSVPSVMTGPIAPELGIAPASLEHIAPTYVGDAALRSRFSDRRARR

Specific function: Unknown

COG id: COG0702

COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI6681764, Length=306, Percent_Identity=32.6797385620915, Blast_Score=125, Evalue=6e-29,
Organism=Caenorhabditis elegans, GI17556106, Length=249, Percent_Identity=29.3172690763052, Blast_Score=94, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24667554, Length=331, Percent_Identity=26.8882175226586, Blast_Score=93, Evalue=3e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34020; Mature: 34020

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGQTIAMLGGTGFIGSRLVNVLVGAGAHVRIGARRREHARHLATLPVDIVELSAFDVRE
CCCCEEEEECCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCHHHHHHCCCCHHH
LARFVAGAQAAVNLVGVLRGGHGKPYGEGFERLHVALPAALAAACIEARVPRMLHVSALG
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
ADPHAPSMYLRSKGDGEIALRAQAAAGALDVTIFRPSIVFGPGDAFVNTFARLQRIFPVL
CCCCCCCEEEECCCCCCEEEEEECCCCEEEEEEECCEEEECCCHHHHHHHHHHHHHHHHH
PLAMPDALMQPVHVGDVAQAIANACVRDATRGRTYELGGPRTYRLEEIVRYAGRLIGRPA
HHCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCH
RIVRLPDALARLQARVFEMLPGEPLVSRDNLASLSVPSVMTGPIAPELGIAPASLEHIAP
HEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHCH
TYVGDAALRSRFSDRRARR
HHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQGQTIAMLGGTGFIGSRLVNVLVGAGAHVRIGARRREHARHLATLPVDIVELSAFDVRE
CCCCEEEEECCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHCCCHHHHHHCCCCHHH
LARFVAGAQAAVNLVGVLRGGHGKPYGEGFERLHVALPAALAAACIEARVPRMLHVSALG
HHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECC
ADPHAPSMYLRSKGDGEIALRAQAAAGALDVTIFRPSIVFGPGDAFVNTFARLQRIFPVL
CCCCCCCEEEECCCCCCEEEEEECCCCEEEEEEECCEEEECCCHHHHHHHHHHHHHHHHH
PLAMPDALMQPVHVGDVAQAIANACVRDATRGRTYELGGPRTYRLEEIVRYAGRLIGRPA
HHCCCHHHHCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHCCCH
RIVRLPDALARLQARVFEMLPGEPLVSRDNLASLSVPSVMTGPIAPELGIAPASLEHIAP
HEEECHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCHHHHHHCH
TYVGDAALRSRFSDRRARR
HHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA