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The map label for this gene is lptG [H]

Identifier: 126453481

GI number: 126453481

Start: 996698

End: 997849

Strand: Reverse

Name: lptG [H]

Synonym: BURPS1106A_1020

Alternate gene names: 126453481

Gene position: 997849-996698 (Counterclockwise)

Preceding gene: 126453581

Following gene: 126452902

Centisome position: 25.02

GC content: 63.63

Gene sequence:

>1152_bases
ATGCGTCTCTACGAAAAATATTTCGCGCGGCAGATCTACGTCACGTTCATCTTCGTGCTGTTCGCGTTTTCAGGGCTGTT
CTTCTTCTTCGACCTGATCAGCGAACTGAACTCGGTCGGCCACGGCAACTACAAGTTCGGCTACGCGGTGCTGCGCGTCG
CGCTGCAGGCACCGTCGCGCTTCTATGAAATCATCCCGGTCGCCGCGCTGATCAGCGCGATCTACGTATTCGCGCAGATG
GCCGCGAACTCGGAGTTCACGATCTTCCGCGTGTCCGGCCTCGCGACGAACCAGGCGCTGCGCTCGCTCGTGAAGATCGG
CGTGCCGATCGTCATCGCGACCTACCTGATCGGCGAATTCATCGGCCCGTACTCGGATCAGCTGTCCGAGCGCGTGCGGC
TCGAGGCGCTCGGCTCGTCGGTGTCGACGAACTTCGCGTCGGGCGTCTGGGTGAAGGACACGCTCACCGCGCGCGACAAC
GGCGAGCCCGTCACGCGCTTCGTGAACGTCGGCACGCTGTCGCCCGACTCGACGATCAGCGACGTGCGCATCTACGAGTT
CGATTCGAAGTTCAACCTGCAGAACGTGCGGATCGCGAAGCGCGGCCACTACCAGCCGCCCGGCCACTGGCTGCTGACGG
ACGTCACCGATACGCAGCTCACGAGCCTCGCGGGCAACGGCACCGCATCGCCCGTCGATACGCTCAACCCCGTCTATCGC
GCGCAGCAGGTCACGCTGCCGCAGTATTCGCTGCGCTCGGACCTGACGCCGCAGATCCTGTCGGTGCTGCTCGTGTCGCC
CGAGCGGATGTCGCTCTTCAATCTGTTTCGCTACATCCAGCATCTGAAAGAGAACCAGCAGGACACGCAGCGCTACGACA
TCGCGCTGTGGCGCAAGCTGCTGTATCCGTTCGCGGTGTTCGTGATGCTCGTGCTGTCGCTGCCGTTCGCGTACCTGCAC
ACGCGCGCGGGCGTCGTCGGCGTGAAGGTGTTCGGCGGGATCATGCTCGGCATGAGCTTCCAGCTCTTCAACACGCTGTT
CTCGCACATCGGTACGCTGAACACGTGGCCCGCGCCGCTCACGGCCGCGCTGCCCGGCTGCATCTATCTCGCGCTCGGCC
TCTTCGCGCTGAAGTGGGTCGATCGGCACTGA

Upstream 100 bases:

>100_bases
AATCGTCGCCGGCATCGTCGCGCTCCTGTTCTGGCTGCGCGTGCGCAACCGGCCCCTCTTCTCGCGCGCCGCGGCCGGCC
GCTCGCAGGGGGCCTGACCG

Downstream 100 bases:

>100_bases
GCGCCAACGCGCATCGTCATCGGAGGATGCGATGAACAAACACGGAATCGTCCTTTTCGGTCACGGCGCGCGCGACGCGC
GCTGGGCCGGGCCGTTCGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 383

Protein sequence:

>383_residues
MRLYEKYFARQIYVTFIFVLFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQAPSRFYEIIPVAALISAIYVFAQM
AANSEFTIFRVSGLATNQALRSLVKIGVPIVIATYLIGEFIGPYSDQLSERVRLEALGSSVSTNFASGVWVKDTLTARDN
GEPVTRFVNVGTLSPDSTISDVRIYEFDSKFNLQNVRIAKRGHYQPPGHWLLTDVTDTQLTSLAGNGTASPVDTLNPVYR
AQQVTLPQYSLRSDLTPQILSVLLVSPERMSLFNLFRYIQHLKENQQDTQRYDIALWRKLLYPFAVFVMLVLSLPFAYLH
TRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAPLTAALPGCIYLALGLFALKWVDRH

Sequences:

>Translated_383_residues
MRLYEKYFARQIYVTFIFVLFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQAPSRFYEIIPVAALISAIYVFAQM
AANSEFTIFRVSGLATNQALRSLVKIGVPIVIATYLIGEFIGPYSDQLSERVRLEALGSSVSTNFASGVWVKDTLTARDN
GEPVTRFVNVGTLSPDSTISDVRIYEFDSKFNLQNVRIAKRGHYQPPGHWLLTDVTDTQLTSLAGNGTASPVDTLNPVYR
AQQVTLPQYSLRSDLTPQILSVLLVSPERMSLFNLFRYIQHLKENQQDTQRYDIALWRKLLYPFAVFVMLVLSLPFAYLH
TRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAPLTAALPGCIYLALGLFALKWVDRH
>Mature_383_residues
MRLYEKYFARQIYVTFIFVLFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQAPSRFYEIIPVAALISAIYVFAQM
AANSEFTIFRVSGLATNQALRSLVKIGVPIVIATYLIGEFIGPYSDQLSERVRLEALGSSVSTNFASGVWVKDTLTARDN
GEPVTRFVNVGTLSPDSTISDVRIYEFDSKFNLQNVRIAKRGHYQPPGHWLLTDVTDTQLTSLAGNGTASPVDTLNPVYR
AQQVTLPQYSLRSDLTPQILSVLLVSPERMSLFNLFRYIQHLKENQQDTQRYDIALWRKLLYPFAVFVMLVLSLPFAYLH
TRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAPLTAALPGCIYLALGLFALKWVDRH

Specific function: Part of the ABC transporter complex lptBFG involved in the translocation of lipopolysaccharide (LPS) from the inner membrane to the outer membrane [H]

COG id: COG0795

COG function: function code R; Predicted permeases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lptF/lptG family [H]

Homologues:

Organism=Escherichia coli, GI87082400, Length=379, Percent_Identity=27.4406332453826, Blast_Score=146, Evalue=2e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005495 [H]

Pfam domain/function: PF03739 YjgP_YjgQ [H]

EC number: NA

Molecular weight: Translated: 43007; Mature: 43007

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLYEKYFARQIYVTFIFVLFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQAPSR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHH
FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLVKIGVPIVIATYLIGEF
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHH
IGPYSDQLSERVRLEALGSSVSTNFASGVWVKDTLTARDNGEPVTRFVNVGTLSPDSTIS
CCCHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEECCCCCCCHHHHEEECCCCCCCCCCC
DVRIYEFDSKFNLQNVRIAKRGHYQPPGHWLLTDVTDTQLTSLAGNGTASPVDTLNPVYR
CEEEEEECCCCCCCCEEEECCCCCCCCCCEEEECCCHHHHHHHCCCCCCCCHHHHHHHHH
AQQVTLPQYSLRSDLTPQILSVLLVSPERMSLFNLFRYIQHLKENQQDTQRYDIALWRKL
HHHCCCCCHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
LYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAPL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
TAALPGCIYLALGLFALKWVDRH
HHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRLYEKYFARQIYVTFIFVLFAFSGLFFFFDLISELNSVGHGNYKFGYAVLRVALQAPSR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHH
FYEIIPVAALISAIYVFAQMAANSEFTIFRVSGLATNQALRSLVKIGVPIVIATYLIGEF
HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHCHHHHHHHHHHHHH
IGPYSDQLSERVRLEALGSSVSTNFASGVWVKDTLTARDNGEPVTRFVNVGTLSPDSTIS
CCCHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEECCCCCCCHHHHEEECCCCCCCCCCC
DVRIYEFDSKFNLQNVRIAKRGHYQPPGHWLLTDVTDTQLTSLAGNGTASPVDTLNPVYR
CEEEEEECCCCCCCCEEEECCCCCCCCCCEEEECCCHHHHHHHCCCCCCCCHHHHHHHHH
AQQVTLPQYSLRSDLTPQILSVLLVSPERMSLFNLFRYIQHLKENQQDTQRYDIALWRKL
HHHCCCCCHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
LYPFAVFVMLVLSLPFAYLHTRAGVVGVKVFGGIMLGMSFQLFNTLFSHIGTLNTWPAPL
HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH
TAALPGCIYLALGLFALKWVDRH
HHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]