| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453475
Identifier: 126453475
GI number: 126453475
Start: 3343951
End: 3344148
Strand: Direct
Name: 126453475
Synonym: BURPS1106A_3433
Alternate gene names: NA
Gene position: 3343951-3344148 (Clockwise)
Preceding gene: 126455058
Following gene: 126454791
Centisome position: 83.84
GC content: 67.68
Gene sequence:
>198_bases ATGCCGTTTGCTTATTCGATTATGCGTTTCATGCATGATCGGGCTTTTGCGCGAAAAACCGGGCGTTCGCCGTGCGAACG GCCGCAATCCCGATGCGATTGCGCGGAGCAACTTTCGTGCGCGGGGCGCCGCGCGGCGGCGCGGGCCGCACGGGCAGGCG TCGCGCGCCCGCCGCGCAGACGAGGCTCGCCCGTGTAA
Upstream 100 bases:
>100_bases AATGGACTGCGCGACGGACGGGGACTGCGATTGCGAAGACATGGAATCTCCAACGGTCGAAGAATGCGCACATTGTCGAA AAAGCGAATTTCGAAATCCA
Downstream 100 bases:
>100_bases CGGTTGCAGCCTGCCGCCGGCAAACCCCGTCGGCGGGCCGGGCATGGGTCCGGCCGCGGGCAGCCCGTGGGCGGGTGGGC CATGGGCCGCCGTCGCCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 64
Protein sequence:
>65_residues MPFAYSIMRFMHDRAFARKTGRSPCERPQSRCDCAEQLSCAGRRAAARAARAGVARPPRRRGSPV
Sequences:
>Translated_65_residues MPFAYSIMRFMHDRAFARKTGRSPCERPQSRCDCAEQLSCAGRRAAARAARAGVARPPRRRGSPV >Mature_64_residues PFAYSIMRFMHDRAFARKTGRSPCERPQSRCDCAEQLSCAGRRAAARAARAGVARPPRRRGSPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7250; Mature: 7119
Theoretical pI: Translated: 12.11; Mature: 12.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 10.8 %Cys+Met (Translated Protein) 6.2 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 9.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFAYSIMRFMHDRAFARKTGRSPCERPQSRCDCAEQLSCAGRRAAARAARAGVARPPRR CCHHHHHHHHHHHHHHHHHHCCCHHCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC RGSPV CCCCC >Mature Secondary Structure PFAYSIMRFMHDRAFARKTGRSPCERPQSRCDCAEQLSCAGRRAAARAARAGVARPPRR CHHHHHHHHHHHHHHHHHHCCCHHCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCC RGSPV CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA