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The map label for this gene is rsmI [H]

Identifier: 126453442

GI number: 126453442

Start: 2810969

End: 2811691

Strand: Direct

Name: rsmI [H]

Synonym: BURPS1106A_2858

Alternate gene names: 126453442

Gene position: 2810969-2811691 (Clockwise)

Preceding gene: 126454329

Following gene: 126454922

Centisome position: 70.48

GC content: 70.12

Gene sequence:

>723_bases
ATGACGGCAGGCACGCTCTATCTGATTCCGAACACGCTCGGCGACGGCGACGCCGCGATGCTCGCCGCCGTGCTGCCCGC
CGCCGTGCAGGCGCGCGCCGCGTCGCTCGGCTATTACATCGGCGAGAACGCGAAGACGACCCGCGCGTTCCTGAAGAAAA
TCGGCACCGAACGGCCGATCCAGGAAATCGAGATTCGCGAGCTGAACGTGAAGACGCCCGCAAGCGAGATCGACCGGCTG
CTCGCGCCGGTGCTCGCGGGCGCCGACGCGGGGCTCGTGTCGGAAGCCGGCTGCCCCGCCGTCGCCGATCCCGGCGCGCT
GCTCGTGCGGCGCGCGCACGAGCGCGGCGTAAAGGTCGTGCCGCTCGTCGGGCCGAGCTCGATCCTGCTCGCGCTGATGG
CCTCCGGGCTGAACGGGCAGAGCTTCGCGTTCCACGGCTACCTGCCCGTCGACGCCGCCGCGCGCGCGAAGCGCCTGCGC
GAACTCGAGCAGCAGTCGCGCCACGCGAATCAGACGCAGATCTTCATCGAGACGCCGTACCGCAATCACGCGATGCTCGA
TGCACTCGTCGCGACGTGCGCGCCGTCGACGCTCGTGTGCGTCGCGGCCGACCTGACGCTCGCGACCGAGACGATCGCAA
GCCGCCCGGCGGCACAATGGAAAAAGGCGCCCGTGCCCGATCTGCACAAGCGCCCCGCGATCTTCCTGCTGCTCGCGAGC
TGA

Upstream 100 bases:

>100_bases
TCGTCGGCCTGCCGCTCATCGCGCTCACGCGGATGCTGCGCGCGGCGGGCTATCCTCTCTTCGGCGCGCCGGCGCCCGCC
GCCGACGGAGTGAACGGACG

Downstream 100 bases:

>100_bases
CGCGAACCGGCGCGAGCCGCGCGAAGCGGCCCGCGCCTTCAGCGCAGCTTCAGCTCGCCGCCGGCGACGGCCGCCTTCAG
CGCGGCCTTGCCGAGCGCCG

Product: tetrapyrrole methylase family protein

Products: NA

Alternate protein names: 16S rRNA 2'-O-ribose C1402 methyltransferase; rRNA (cytidine-2'-O-)-methyltransferase RsmI [H]

Number of amino acids: Translated: 240; Mature: 239

Protein sequence:

>240_residues
MTAGTLYLIPNTLGDGDAAMLAAVLPAAVQARAASLGYYIGENAKTTRAFLKKIGTERPIQEIEIRELNVKTPASEIDRL
LAPVLAGADAGLVSEAGCPAVADPGALLVRRAHERGVKVVPLVGPSSILLALMASGLNGQSFAFHGYLPVDAAARAKRLR
ELEQQSRHANQTQIFIETPYRNHAMLDALVATCAPSTLVCVAADLTLATETIASRPAAQWKKAPVPDLHKRPAIFLLLAS

Sequences:

>Translated_240_residues
MTAGTLYLIPNTLGDGDAAMLAAVLPAAVQARAASLGYYIGENAKTTRAFLKKIGTERPIQEIEIRELNVKTPASEIDRL
LAPVLAGADAGLVSEAGCPAVADPGALLVRRAHERGVKVVPLVGPSSILLALMASGLNGQSFAFHGYLPVDAAARAKRLR
ELEQQSRHANQTQIFIETPYRNHAMLDALVATCAPSTLVCVAADLTLATETIASRPAAQWKKAPVPDLHKRPAIFLLLAS
>Mature_239_residues
TAGTLYLIPNTLGDGDAAMLAAVLPAAVQARAASLGYYIGENAKTTRAFLKKIGTERPIQEIEIRELNVKTPASEIDRLL
APVLAGADAGLVSEAGCPAVADPGALLVRRAHERGVKVVPLVGPSSILLALMASGLNGQSFAFHGYLPVDAAARAKRLRE
LEQQSRHANQTQIFIETPYRNHAMLDALVATCAPSTLVCVAADLTLATETIASRPAAQWKKAPVPDLHKRPAIFLLLAS

Specific function: Catalyzes the 2'-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA [H]

COG id: COG0313

COG function: function code R; Predicted methyltransferases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmI family [H]

Homologues:

Organism=Escherichia coli, GI1789535, Length=237, Percent_Identity=29.957805907173, Blast_Score=96, Evalue=1e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000878
- InterPro:   IPR014777
- InterPro:   IPR014776
- InterPro:   IPR008189
- InterPro:   IPR018063 [H]

Pfam domain/function: PF00590 TP_methylase [H]

EC number: NA

Molecular weight: Translated: 25359; Mature: 25228

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAGTLYLIPNTLGDGDAAMLAAVLPAAVQARAASLGYYIGENAKTTRAFLKKIGTERPI
CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHHHHHHHHCCCCCH
QEIEIRELNVKTPASEIDRLLAPVLAGADAGLVSEAGCPAVADPGALLVRRAHERGVKVV
HHHHEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEE
PLVGPSSILLALMASGLNGQSFAFHGYLPVDAAARAKRLRELEQQSRHANQTQIFIETPY
EEECHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
RNHAMLDALVATCAPSTLVCVAADLTLATETIASRPAAQWKKAPVPDLHKRPAIFLLLAS
CCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCEEEEEEEC
>Mature Secondary Structure 
TAGTLYLIPNTLGDGDAAMLAAVLPAAVQARAASLGYYIGENAKTTRAFLKKIGTERPI
CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHHHHHHHHCCCCCH
QEIEIRELNVKTPASEIDRLLAPVLAGADAGLVSEAGCPAVADPGALLVRRAHERGVKVV
HHHHEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEE
PLVGPSSILLALMASGLNGQSFAFHGYLPVDAAARAKRLRELEQQSRHANQTQIFIETPY
EEECHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
RNHAMLDALVATCAPSTLVCVAADLTLATETIASRPAAQWKKAPVPDLHKRPAIFLLLAS
CCHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCCHHHHCCCCCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10910347 [H]