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The map label for this gene is livH [C]

Identifier: 126453325

GI number: 126453325

Start: 3964073

End: 3965128

Strand: Reverse

Name: livH [C]

Synonym: BURPS1106A_4059

Alternate gene names: 126453325

Gene position: 3965128-3964073 (Counterclockwise)

Preceding gene: 126452480

Following gene: 126453842

Centisome position: 99.42

GC content: 66.48

Gene sequence:

>1056_bases
ATGGATTTCTCCATCGCGGCAATTCTTGCGCAGGACGGCATCACGACGGGCGCGATCTACGCGCTACTGTCGCTCGCACT
CGTGCTCGTCTTTTCCGTCACGCGCGTGATCTTCATCCCCCAAGGCGAATTCGTCACCTATGGCGCGCTGACGCTGGCCG
CGCTACAGGCGCAGAAATTTCCGGCAACCTGCTGGCTGCTGTTCGTCGCCGGCATCGCCTGCTTCATGCTCGAAGTGGGC
GGGCTGATCCGGCATCGCGCGCGTCGCCGCCGGCTCGCCCGCACGCTGACGACGCTGGCGAGCCGCTACGTGCTGCTGCC
GCTCGCGATCTACGCGGTGACGAGAAGCGCCGCCGCGCAGCCGTCGCCGATGATCGCGCAGATCGCGCTCACGCTTGCGA
TCGTCGTGCCGCTCGGGCCGTTCATCTACCGGCTCGCGTATCAGCCGATCGCCGAAGGCACGACGCTGCTGCTGCTGATC
GTATCGGTTGCCGTGCATTTCGCGTTGGTCGGGCTCGGGCTGGTCATGTTCGGCGCGGAAGGCTCGCGCACGACCGCGTT
CTCGGATACGTCACTCGCGCTCGGCAGCCTGTCGATCTCGATGCAGAGCGCCTGGGTGGTCGGCACCGCGCTCGTGCTGA
TCGCGGCGCTCTATTTGTATTTCGAACGCACGTTGCCCGGCAAGGCGCTGCGTGCGACGTCGGTAAACCGTCTCGGCGCG
CGGCTCGTCGGCATCGGCACGACCGAGGCAGGGCGGCTCGCGTTCACGCTCGCGGCCGGGCTCGGCGCGTTGTCGGGCGT
ACTCGTCGGGCCGCTGACGACGATCTACTACGATTCCGGCTTCCTGATCGGCCTGAAAGGCTTCGTCGGCGCGATCATCG
GCGGGCTCGTCAGCTATCCGCTGGCCGCGGCCGGATCGCTTCTCGTCGGCGTGTTGGAGTCGTACTCGTCGTTCTGGGCG
AGCGCGTACAAGGAAGTAATCGTTTTCACGCTGATTGTGCCGGTGCTGCTGTGGCGCAGCCTTGCGGCGCCGCAGACGGA
AGACGAGGAGGCGTGA

Upstream 100 bases:

>100_bases
GTATGCCGCGCCGGGCGCGTTTCGCGACGGCTGCTGTTGCGCGGGCCGTCTTTCCGTCTTTCCGTTTTTCCGTCGACGCA
TTCTCAACCGAAGAAACCCC

Downstream 100 bases:

>100_bases
CGCAATGAAGGCGATCTTGCGCAACAAAGCGTTCTGGCTGTTTCTCGTCGCGCTGTTCGCGCTACCGGCATTGCCCGGCG
CGGCGCGCGTACCCGAGTAC

Product: putative amino acid uptake ABC transporter, permease protein

Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]

Alternate protein names: ABC Transporter Permease Protein; Branched-Chain Amino Acid ABC Transporter Permease; Branched-Chain Amino Acid ABC Transporter Permease Protein; Branched-Chain Amino Acid Transport System Permease Protein; Amino Acid Or Sugar ABC Transport System Permease Protein; ABC Transporter Permease; Inner-Membrane TranslocatorABC Transporter ; Branched Chain Amino Acid ABC Transporter Permease; ABC-Transporter Permease Component; Branched-Chain Amino Acid ABC Transporter Membrane Protein; ABC Transporter ATPase Component; Branched-Chain Amino Acid Transport System Permease; Amino Acid ABC Transporter Permease; ABC Transporter Membrane Spanning Protein

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MDFSIAAILAQDGITTGAIYALLSLALVLVFSVTRVIFIPQGEFVTYGALTLAALQAQKFPATCWLLFVAGIACFMLEVG
GLIRHRARRRRLARTLTTLASRYVLLPLAIYAVTRSAAAQPSPMIAQIALTLAIVVPLGPFIYRLAYQPIAEGTTLLLLI
VSVAVHFALVGLGLVMFGAEGSRTTAFSDTSLALGSLSISMQSAWVVGTALVLIAALYLYFERTLPGKALRATSVNRLGA
RLVGIGTTEAGRLAFTLAAGLGALSGVLVGPLTTIYYDSGFLIGLKGFVGAIIGGLVSYPLAAAGSLLVGVLESYSSFWA
SAYKEVIVFTLIVPVLLWRSLAAPQTEDEEA

Sequences:

>Translated_351_residues
MDFSIAAILAQDGITTGAIYALLSLALVLVFSVTRVIFIPQGEFVTYGALTLAALQAQKFPATCWLLFVAGIACFMLEVG
GLIRHRARRRRLARTLTTLASRYVLLPLAIYAVTRSAAAQPSPMIAQIALTLAIVVPLGPFIYRLAYQPIAEGTTLLLLI
VSVAVHFALVGLGLVMFGAEGSRTTAFSDTSLALGSLSISMQSAWVVGTALVLIAALYLYFERTLPGKALRATSVNRLGA
RLVGIGTTEAGRLAFTLAAGLGALSGVLVGPLTTIYYDSGFLIGLKGFVGAIIGGLVSYPLAAAGSLLVGVLESYSSFWA
SAYKEVIVFTLIVPVLLWRSLAAPQTEDEEA
>Mature_351_residues
MDFSIAAILAQDGITTGAIYALLSLALVLVFSVTRVIFIPQGEFVTYGALTLAALQAQKFPATCWLLFVAGIACFMLEVG
GLIRHRARRRRLARTLTTLASRYVLLPLAIYAVTRSAAAQPSPMIAQIALTLAIVVPLGPFIYRLAYQPIAEGTTLLLLI
VSVAVHFALVGLGLVMFGAEGSRTTAFSDTSLALGSLSISMQSAWVVGTALVLIAALYLYFERTLPGKALRATSVNRLGA
RLVGIGTTEAGRLAFTLAAGLGALSGVLVGPLTTIYYDSGFLIGLKGFVGAIIGGLVSYPLAAAGSLLVGVLESYSSFWA
SAYKEVIVFTLIVPVLLWRSLAAPQTEDEEA

Specific function: Part Of The Binding-Protein-Dependent Transport System For Branched-Chain Amino Acids. Probably Responsible For The Translocation Of The Substrates Across The Membrane. [C]

COG id: COG0559

COG function: function code E; Branched-chain amino acid ABC-type transport system, permease components

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789866, Length=359, Percent_Identity=26.7409470752089, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36965; Mature: 36965

Theoretical pI: Translated: 9.58; Mature: 9.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFSIAAILAQDGITTGAIYALLSLALVLVFSVTRVIFIPQGEFVTYGALTLAALQAQKF
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCEEHHHHHHHHHHHHHCC
PATCWLLFVAGIACFMLEVGGLIRHRARRRRLARTLTTLASRYVLLPLAIYAVTRSAAAQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PSPMIAQIALTLAIVVPLGPFIYRLAYQPIAEGTTLLLLIVSVAVHFALVGLGLVMFGAE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
GSRTTAFSDTSLALGSLSISMQSAWVVGTALVLIAALYLYFERTLPGKALRATSVNRLGA
CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
RLVGIGTTEAGRLAFTLAAGLGALSGVLVGPLTTIYYDSGFLIGLKGFVGAIIGGLVSYP
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEHHHHHHHHHHHHHHHHH
LAAAGSLLVGVLESYSSFWASAYKEVIVFTLIVPVLLWRSLAAPQTEDEEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDFSIAAILAQDGITTGAIYALLSLALVLVFSVTRVIFIPQGEFVTYGALTLAALQAQKF
CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCEEHHHHHHHHHHHHHCC
PATCWLLFVAGIACFMLEVGGLIRHRARRRRLARTLTTLASRYVLLPLAIYAVTRSAAAQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PSPMIAQIALTLAIVVPLGPFIYRLAYQPIAEGTTLLLLIVSVAVHFALVGLGLVMFGAE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
GSRTTAFSDTSLALGSLSISMQSAWVVGTALVLIAALYLYFERTLPGKALRATSVNRLGA
CCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
RLVGIGTTEAGRLAFTLAAGLGALSGVLVGPLTTIYYDSGFLIGLKGFVGAIIGGLVSYP
EEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEHHHHHHHHHHHHHHHHH
LAAAGSLLVGVLESYSSFWASAYKEVIVFTLIVPVLLWRSLAAPQTEDEEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]

Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA