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The map label for this gene is 126453312

Identifier: 126453312

GI number: 126453312

Start: 3163188

End: 3164384

Strand: Reverse

Name: 126453312

Synonym: BURPS1106A_3256

Alternate gene names: NA

Gene position: 3164384-3163188 (Counterclockwise)

Preceding gene: 126452616

Following gene: 126454048

Centisome position: 79.34

GC content: 65.66

Gene sequence:

>1197_bases
ATGATTGTCGTCGTCGTCGATTCGATGGAGCGGTACTACTTTGCCGTGCGGCTCGTGAAGGCGGTCAGAAAGGAATTCGA
CTTTCTGTTCGCCGCGAGCGAGCCGCTCGCGCACCTGATGGCACTGGCCGCGGGCTTTCGGTCGGTCTATTTGCGGCGCG
GGGCGCATGCGCCCGCCATGCTCGATGCGGCGGCCGGGATTCGGTCCGATGCATCGATCGAGGTGCTGAACGGACAGATG
ACGCCCGAGCGCGCGCGCGCCGACGCGCAGGCGGTCTTCGCCGCGATGTCCGGGGTGTTCAGCCGTCATCTCGTGTCGCA
GTGCCTGATGTGGAACGGCCAGCAGCTCGTTTGCCGCGCGGTCGCGCACGCGTGCGCGGCGCACGGGGTACCGACGAAAT
TCGTCGAGATCTCGAATTTGCCGGACAAGCTGTTCGTCGATCGGCTCGGCGTCAACGCGCTGTCGTCGATCAGCCGCAAT
CCGGCCGTCATCGACGGCTTGCCGATGCCGACCGAAGGCGAGCATCGCCGCTGGTTCGCGCGCTACGAGGCGTACAAGGC
GCGGCCGCTGCCGCAGTCGCGCACGTCGTGGGCGCGCAAGGCGATGTCGGCCGCGAACTATGCGCTGAAGCTCGCCACGC
AAGGCGTGGCGCGCAAACGTTTGGACGCGGCGCGCGCGACGAACGGCGCACGCGCGCCGGCGCAGGCGAAAGTGCTGAGC
ACGAAGGAACTCTCGGCGCTGCGCTACGTGTTCCTGCCGCTGCAGGTGTCGGGCGACACGCAGATCAAGCTGCATTCGGA
TGTCGACAACCTGAAGGCGATCCGGCTCGCGTTCGAGCACGCGGCGAACGAGAACGCGGACCTGATCGTCAAGCTGCATC
CGGCCGAGCGTGACGTGGCCGTGATCGACGAGGTGGTGCGGATGCAGCGCGTCTATCACTTCGACCTCGTGACGTCGCCG
ACCACCGATCTGATCAAGCACGCGCATTCGGTCGTCACGATCAATTCGACGGTCGGCCTCGAGGCGCTGTTGTACGGCAA
GCCGGTCGTGTCGCTCGGCCGGTGCTTCTACAAGGAGTTCGATCGCGCGAGGCTGCTCAAGTACATCCATGCGTTCCTGA
TCGACGGCATCGATTACTTCGGTCGAGCGGACATCGCGCCGCGCGCCGCGCGAAACGTGTTCTCGATGAAGCACTGA

Upstream 100 bases:

>100_bases
TCGCCGGCATCGCGCTGACATTCAGCGTGATGAGCGGCAGCGTGTCGCGTCGGCGCGCCGGCGCCTGACGTTTATTCCAT
TTCTTCATTGAGCGCAGATC

Downstream 100 bases:

>100_bases
CATGCGCACGACGCTGAAACGGACCTTCGATGCGATCGCCGAGGATCGCAGGCGCAACGCGTTCTTCAAGACGCGCTGCG
TCGTCGTGTTCTTCCGGATC

Product: capsule polysaccharide biosynthesis protein

Products: NA

Alternate protein names: Capsule Polysaccharide Biosynthesis; Capsule Polysaccharide Protein HcsB

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MIVVVVDSMERYYFAVRLVKAVRKEFDFLFAASEPLAHLMALAAGFRSVYLRRGAHAPAMLDAAAGIRSDASIEVLNGQM
TPERARADAQAVFAAMSGVFSRHLVSQCLMWNGQQLVCRAVAHACAAHGVPTKFVEISNLPDKLFVDRLGVNALSSISRN
PAVIDGLPMPTEGEHRRWFARYEAYKARPLPQSRTSWARKAMSAANYALKLATQGVARKRLDAARATNGARAPAQAKVLS
TKELSALRYVFLPLQVSGDTQIKLHSDVDNLKAIRLAFEHAANENADLIVKLHPAERDVAVIDEVVRMQRVYHFDLVTSP
TTDLIKHAHSVVTINSTVGLEALLYGKPVVSLGRCFYKEFDRARLLKYIHAFLIDGIDYFGRADIAPRAARNVFSMKH

Sequences:

>Translated_398_residues
MIVVVVDSMERYYFAVRLVKAVRKEFDFLFAASEPLAHLMALAAGFRSVYLRRGAHAPAMLDAAAGIRSDASIEVLNGQM
TPERARADAQAVFAAMSGVFSRHLVSQCLMWNGQQLVCRAVAHACAAHGVPTKFVEISNLPDKLFVDRLGVNALSSISRN
PAVIDGLPMPTEGEHRRWFARYEAYKARPLPQSRTSWARKAMSAANYALKLATQGVARKRLDAARATNGARAPAQAKVLS
TKELSALRYVFLPLQVSGDTQIKLHSDVDNLKAIRLAFEHAANENADLIVKLHPAERDVAVIDEVVRMQRVYHFDLVTSP
TTDLIKHAHSVVTINSTVGLEALLYGKPVVSLGRCFYKEFDRARLLKYIHAFLIDGIDYFGRADIAPRAARNVFSMKH
>Mature_398_residues
MIVVVVDSMERYYFAVRLVKAVRKEFDFLFAASEPLAHLMALAAGFRSVYLRRGAHAPAMLDAAAGIRSDASIEVLNGQM
TPERARADAQAVFAAMSGVFSRHLVSQCLMWNGQQLVCRAVAHACAAHGVPTKFVEISNLPDKLFVDRLGVNALSSISRN
PAVIDGLPMPTEGEHRRWFARYEAYKARPLPQSRTSWARKAMSAANYALKLATQGVARKRLDAARATNGARAPAQAKVLS
TKELSALRYVFLPLQVSGDTQIKLHSDVDNLKAIRLAFEHAANENADLIVKLHPAERDVAVIDEVVRMQRVYHFDLVTSP
TTDLIKHAHSVVTINSTVGLEALLYGKPVVSLGRCFYKEFDRARLLKYIHAFLIDGIDYFGRADIAPRAARNVFSMKH

Specific function: Unknown

COG id: COG3562

COG function: function code M; Capsule polysaccharide export protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44051; Mature: 44051

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVVVVDSMERYYFAVRLVKAVRKEFDFLFAASEPLAHLMALAAGFRSVYLRRGAHAPAM
CEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
LDAAAGIRSDASIEVLNGQMTPERARADAQAVFAAMSGVFSRHLVSQCLMWNGQQLVCRA
HHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VAHACAAHGVPTKFVEISNLPDKLFVDRLGVNALSSISRNPAVIDGLPMPTEGEHRRWFA
HHHHHHHCCCCCEEEEECCCCHHHHHHHHCHHHHHHCCCCCCEECCCCCCCCCCHHHHHH
RYEAYKARPLPQSRTSWARKAMSAANYALKLATQGVARKRLDAARATNGARAPAQAKVLS
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
TKELSALRYVFLPLQVSGDTQIKLHSDVDNLKAIRLAFEHAANENADLIVKLHPAERDVA
HHHHHHEEEEEEEEEECCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHH
VIDEVVRMQRVYHFDLVTSPTTDLIKHAHSVVTINSTVGLEALLYGKPVVSLGRCFYKEF
HHHHHHHHHHHHHHEECCCCHHHHHHCCCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHH
DRARLLKYIHAFLIDGIDYFGRADIAPRAARNVFSMKH
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MIVVVVDSMERYYFAVRLVKAVRKEFDFLFAASEPLAHLMALAAGFRSVYLRRGAHAPAM
CEEEEEECHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCHH
LDAAAGIRSDASIEVLNGQMTPERARADAQAVFAAMSGVFSRHLVSQCLMWNGQQLVCRA
HHHHHCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VAHACAAHGVPTKFVEISNLPDKLFVDRLGVNALSSISRNPAVIDGLPMPTEGEHRRWFA
HHHHHHHCCCCCEEEEECCCCHHHHHHHHCHHHHHHCCCCCCEECCCCCCCCCCHHHHHH
RYEAYKARPLPQSRTSWARKAMSAANYALKLATQGVARKRLDAARATNGARAPAQAKVLS
HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHH
TKELSALRYVFLPLQVSGDTQIKLHSDVDNLKAIRLAFEHAANENADLIVKLHPAERDVA
HHHHHHEEEEEEEEEECCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHH
VIDEVVRMQRVYHFDLVTSPTTDLIKHAHSVVTINSTVGLEALLYGKPVVSLGRCFYKEF
HHHHHHHHHHHHHHEECCCCHHHHHHCCCCEEEEECCCCCHHHHCCCCHHHHHHHHHHHH
DRARLLKYIHAFLIDGIDYFGRADIAPRAARNVFSMKH
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA