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The map label for this gene is 126453290

Identifier: 126453290

GI number: 126453290

Start: 3563819

End: 3564454

Strand: Reverse

Name: 126453290

Synonym: BURPS1106A_3661

Alternate gene names: NA

Gene position: 3564454-3563819 (Counterclockwise)

Preceding gene: 126452377

Following gene: 126455085

Centisome position: 89.37

GC content: 72.33

Gene sequence:

>636_bases
GTGCTCGCCTGCGGCATCATCGCCGGTTGCGCATCGCAGCCGACGCCGCCAACGACCGAAGCGTTCAACAAATCGCTGGC
CGACGCCGACGCGGTGGCGAAGACGGGCGATCAGGAGCGTGCGATAGGCCTTTACCAGCAGCTCGCGAAGTCCGATCCGA
CGCGCGAGGAGCCGTGGTCGCGCATCGCGCAGATCCAGTTCCAGCAGGGCCACTACGGCCAGGCGATCGTCGCCGCGCAG
GAAGCGCTGCAGCGCGACAAGACCGACCGTCAGGCGAAGAGCGTGCTCGCCGTCGCGGGCCTGCGCATCGCGACCGAATC
GCTCGGCGAGCTGCGCCAGGATTCGTCGCTCGCCGGCGACGCGAAGTCCGACGCGCAAGCGCTCGCGAAGCAGCTGCGCG
ACACGCTCGGCGAGGCCGCGCTGTTCCCGCCGGAGCAGCAGGCGACGAAGCCCGTCGTGAAGAAGCGCCGCATCGTTCGC
CGCGCGAAGCCCGTGCATGAGGCCCCGCGCGCTGCGGAAAGCGAGACGGCAGCCGCACCCGCGACACCGCCCGCCGCGCC
CGCGCAGCCCGCCGCCACGCCGGCGCCGGCGCCCGCGAAGGCGGCAGGCGGCGATCCGTTCAGCGCACTGCGTTAA

Upstream 100 bases:

>100_bases
CTTGTAGCAAAGCAAAATCACGAATTCTCAACGATTTAAAACGCCCGCGCCGGGGATATAAACGATGAAAGACCGTCTCT
TCGCAAAACTTTCTGGGGTA

Downstream 100 bases:

>100_bases
GCCGCGCGCGATCCACACACTCACCGGGAGCCGTCGATGGCGAAGAAAGAAAGCATTCAAAAGCGCTTGCAGAAAGTGCG
GCCGCCCCGCGTCCAGTTGA

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: TPR Repeat-Containing Protein; TPR Repeat; TPR Repeat Protein; Tetratricopeptide Repeat Family Protein; Tetratricopeptide Repeat-Containing Protein

Number of amino acids: Translated: 211; Mature: 211

Protein sequence:

>211_residues
MLACGIIAGCASQPTPPTTEAFNKSLADADAVAKTGDQERAIGLYQQLAKSDPTREEPWSRIAQIQFQQGHYGQAIVAAQ
EALQRDKTDRQAKSVLAVAGLRIATESLGELRQDSSLAGDAKSDAQALAKQLRDTLGEAALFPPEQQATKPVVKKRRIVR
RAKPVHEAPRAAESETAAAPATPPAAPAQPAATPAPAPAKAAGGDPFSALR

Sequences:

>Translated_211_residues
MLACGIIAGCASQPTPPTTEAFNKSLADADAVAKTGDQERAIGLYQQLAKSDPTREEPWSRIAQIQFQQGHYGQAIVAAQ
EALQRDKTDRQAKSVLAVAGLRIATESLGELRQDSSLAGDAKSDAQALAKQLRDTLGEAALFPPEQQATKPVVKKRRIVR
RAKPVHEAPRAAESETAAAPATPPAAPAQPAATPAPAPAKAAGGDPFSALR
>Mature_211_residues
MLACGIIAGCASQPTPPTTEAFNKSLADADAVAKTGDQERAIGLYQQLAKSDPTREEPWSRIAQIQFQQGHYGQAIVAAQ
EALQRDKTDRQAKSVLAVAGLRIATESLGELRQDSSLAGDAKSDAQALAKQLRDTLGEAALFPPEQQATKPVVKKRRIVR
RAKPVHEAPRAAESETAAAPATPPAAPAQPAATPAPAPAKAAGGDPFSALR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22058; Mature: 22058

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: PS50293 TPR_REGION ; PS00443 GATASE_TYPE_II

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLACGIIAGCASQPTPPTTEAFNKSLADADAVAKTGDQERAIGLYQQLAKSDPTREEPWS
CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHH
RIAQIQFQQGHYGQAIVAAQEALQRDKTDRQAKSVLAVAGLRIATESLGELRQDSSLAGD
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AKSDAQALAKQLRDTLGEAALFPPEQQATKPVVKKRRIVRRAKPVHEAPRAAESETAAAP
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCHHCCCCCCCC
ATPPAAPAQPAATPAPAPAKAAGGDPFSALR
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC
>Mature Secondary Structure
MLACGIIAGCASQPTPPTTEAFNKSLADADAVAKTGDQERAIGLYQQLAKSDPTREEPWS
CCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHH
RIAQIQFQQGHYGQAIVAAQEALQRDKTDRQAKSVLAVAGLRIATESLGELRQDSSLAGD
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
AKSDAQALAKQLRDTLGEAALFPPEQQATKPVVKKRRIVRRAKPVHEAPRAAESETAAAP
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCHHHHCCCHHCCCCCCCC
ATPPAAPAQPAATPAPAPAKAAGGDPFSALR
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA