| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is ppk [H]
Identifier: 126453218
GI number: 126453218
Start: 1479655
End: 1481715
Strand: Reverse
Name: ppk [H]
Synonym: BURPS1106A_1523
Alternate gene names: 126453218
Gene position: 1481715-1479655 (Counterclockwise)
Preceding gene: 126453467
Following gene: 126454978
Centisome position: 37.15
GC content: 66.04
Gene sequence:
>2061_bases ATGTCCCTCCGTTATCCGCTCCTGAATCGCGAACTCGGCATCCTGGGCTTCAACGAGCGCGTGCTCGCCCAAGCCGCCGA TCCGCACGTCCCCCTCCTCGAGCGTCTGCGCTTCATCTGCATCACGAGCAGCAACCTCGACGAATTCTTCGAAGTCCGGA TGGCCGGGCTGCAAGAGCAGATGCGCGACAATCCGGGGGCGCTCGCGCCGGACGGCATGTCGCTGCAGCACGTGTACGAT CTCGTCGTCGAGCGCGCGCAGCGGCTCGTGCACCGGCAATATACGATGCTGCACGAAACGATCCTGCCCGCGCTCGAGCA GGAAGGTATCTATTTCCACGGCACCGAGACATGGAGCGACGCGCAGATCGAATGGGCGCGCCGCTACTTCTTCGACGAGC TGCTGCCCGTTCTCACGCCGATCGGGCTCGACCCCGCGCACCCGTTCCCGCGCGTGCTGAACAAGAGCCTGAACTTCGTG ATCGAGCTCGAGGGCCGCGACGCGTTCGGCCGCCAGGCGGTGATGGGCATCGTGCAGGCGCCGCGCGCGCTGCCGCGCCT CGTGCGCATGCCGCATGCGCTGTCGGGTTTCCAGCACGGCTTCGTGCTGCTGAGCTCGCTGATGCAGCGCTTCGTCGGCG AGCTGTTTCCGAAACTCGTCGTGAAGAGCTGCAACCAGTTTCGGATCACGCGCAACAGCGAGCTCTTCGTCGACGAAGAC GAAATCACGAACCTGCGCGTCGCGCTGCAGGGCGAGCTACCCGCGCGCCATCTCGGCAACGCGGTGCGGCTCGAGGTGTC GGCCGACACGCCGGCGCATCTCGTGCGGCGCCTGCTCGACGAAAGCGGCCTGACCGAGAAGGACTGCTATCGCGTCGACG GCCCCGTCAATCTCGTGCGGCTGATGCAGTTGCCGGATCTCGTCGATCTGCCCGAGCTGAAGTTCACGCCGTTCCTGCCG GCGATCTCGCCCGCGATCGCGAACGCGCCGTCGATGTTCGACGCGATCGATCACGGCGACATCCTGCTGCACCATCCGTA CGAGAGCTTCCAGCCGGTGCTCGAGCTGCTGCAGCAGGCCGCGCAGGATCCGAGCGTCGTCGCGATCAAGCAGACGATCT ACCGCACCGGCACCGATTCGCCGCTGATGGATGCGCTGATGGAAGCGGCGCGCAACGGCAAGGAGGTAACGGTCGTCGTC GAGCTGCTCGCGCGCTTCGACGAGGAGACGAACATCAACTGGGCCGCGCAGCTCGAATCGGTGGGCGCGCACGTCGTGTA CGGCGTCGTCGGCCACAAGTGCCACGCGAAGATGATGCTGATCGTGCGCCGCGTGACGCAGGGCGGCAAGTCCGTGCTGC GCCGCTACGTGCATCTCGGCACCGGCAACTATCACCCGCGCACCGCGCGCCTTTACACCGACTTCGGCTTGATGACGTCC GAGCCCACGATCTGCGAGGACGTGCATCACGTGTTCCAGCAACTGACGGGCATCGGCGGCGAGCTGAAGCTGCACGAGAT GTGGCAATCGCCGTTCACGCTGCACCCGCGGCTCATCGAGCACATCCGCGCGGAAGCCGGGAACGCGCGCGCGGGCAAGC GCGCGCGGATCGTCGCGAAGATGAACGCGCTGCTCGAGCCGACCGTGATCGCCGAGCTCTACGAGGCGTCGCAAGCCGGC GTGAAAATCGATCTGATCGTGCGCGGCGTCTGCGCATTGCAGCCCGGCGTGCCGGGGCTGTCGGAGAACATCACGGTGCG CTCGATCGTCGGGCGCTTTCTCGAGCACCACCGGATCTACTACTTTCACGCGAACGGCGAAGAGCTCGTCTATCTGTCGA GCGCCGACTGGATGGATCGCAATCTGTTCAGGCGCGTCGAAGTCGCGTTCCCCGTGCGCGAGCGCAAGCTGAAGCGCCGC GTGATCGCCGAGGGGCTGTCGGTGTTCCTCGGCGACAATCAATCCGCGTGGCTCATGCAAAGCGACGGCCACTATCGCCG CCGCCGCGCGGGCAAGGCGCCGCGCAACGCGCAGCTCGGGCTGCTCGCAAAATTCTGCTGA
Upstream 100 bases:
>100_bases TTTGCCGACAAACATCAAACTGTCATCAGCACGTCATCGCACCGTGAGAATTTCCGAGCGACCTTTCGAGTCTGCGCCTG ACCTTCCGTATTCTCTGCCG
Downstream 100 bases:
>100_bases CGGGCGCCGGCGCGTGCGCGGTGCCGCGCCGCGGCAAGCGCCGCGCCGCTCAAACCTCGAACGAGGGCGCGGCGGGCGCG CCCGCCGCGTGGCCCGACGC
Product: polyphosphate kinase
Products: NA
Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase [H]
Number of amino acids: Translated: 686; Mature: 685
Protein sequence:
>686_residues MSLRYPLLNRELGILGFNERVLAQAADPHVPLLERLRFICITSSNLDEFFEVRMAGLQEQMRDNPGALAPDGMSLQHVYD LVVERAQRLVHRQYTMLHETILPALEQEGIYFHGTETWSDAQIEWARRYFFDELLPVLTPIGLDPAHPFPRVLNKSLNFV IELEGRDAFGRQAVMGIVQAPRALPRLVRMPHALSGFQHGFVLLSSLMQRFVGELFPKLVVKSCNQFRITRNSELFVDED EITNLRVALQGELPARHLGNAVRLEVSADTPAHLVRRLLDESGLTEKDCYRVDGPVNLVRLMQLPDLVDLPELKFTPFLP AISPAIANAPSMFDAIDHGDILLHHPYESFQPVLELLQQAAQDPSVVAIKQTIYRTGTDSPLMDALMEAARNGKEVTVVV ELLARFDEETNINWAAQLESVGAHVVYGVVGHKCHAKMMLIVRRVTQGGKSVLRRYVHLGTGNYHPRTARLYTDFGLMTS EPTICEDVHHVFQQLTGIGGELKLHEMWQSPFTLHPRLIEHIRAEAGNARAGKRARIVAKMNALLEPTVIAELYEASQAG VKIDLIVRGVCALQPGVPGLSENITVRSIVGRFLEHHRIYYFHANGEELVYLSSADWMDRNLFRRVEVAFPVRERKLKRR VIAEGLSVFLGDNQSAWLMQSDGHYRRRRAGKAPRNAQLGLLAKFC
Sequences:
>Translated_686_residues MSLRYPLLNRELGILGFNERVLAQAADPHVPLLERLRFICITSSNLDEFFEVRMAGLQEQMRDNPGALAPDGMSLQHVYD LVVERAQRLVHRQYTMLHETILPALEQEGIYFHGTETWSDAQIEWARRYFFDELLPVLTPIGLDPAHPFPRVLNKSLNFV IELEGRDAFGRQAVMGIVQAPRALPRLVRMPHALSGFQHGFVLLSSLMQRFVGELFPKLVVKSCNQFRITRNSELFVDED EITNLRVALQGELPARHLGNAVRLEVSADTPAHLVRRLLDESGLTEKDCYRVDGPVNLVRLMQLPDLVDLPELKFTPFLP AISPAIANAPSMFDAIDHGDILLHHPYESFQPVLELLQQAAQDPSVVAIKQTIYRTGTDSPLMDALMEAARNGKEVTVVV ELLARFDEETNINWAAQLESVGAHVVYGVVGHKCHAKMMLIVRRVTQGGKSVLRRYVHLGTGNYHPRTARLYTDFGLMTS EPTICEDVHHVFQQLTGIGGELKLHEMWQSPFTLHPRLIEHIRAEAGNARAGKRARIVAKMNALLEPTVIAELYEASQAG VKIDLIVRGVCALQPGVPGLSENITVRSIVGRFLEHHRIYYFHANGEELVYLSSADWMDRNLFRRVEVAFPVRERKLKRR VIAEGLSVFLGDNQSAWLMQSDGHYRRRRAGKAPRNAQLGLLAKFC >Mature_685_residues SLRYPLLNRELGILGFNERVLAQAADPHVPLLERLRFICITSSNLDEFFEVRMAGLQEQMRDNPGALAPDGMSLQHVYDL VVERAQRLVHRQYTMLHETILPALEQEGIYFHGTETWSDAQIEWARRYFFDELLPVLTPIGLDPAHPFPRVLNKSLNFVI ELEGRDAFGRQAVMGIVQAPRALPRLVRMPHALSGFQHGFVLLSSLMQRFVGELFPKLVVKSCNQFRITRNSELFVDEDE ITNLRVALQGELPARHLGNAVRLEVSADTPAHLVRRLLDESGLTEKDCYRVDGPVNLVRLMQLPDLVDLPELKFTPFLPA ISPAIANAPSMFDAIDHGDILLHHPYESFQPVLELLQQAAQDPSVVAIKQTIYRTGTDSPLMDALMEAARNGKEVTVVVE LLARFDEETNINWAAQLESVGAHVVYGVVGHKCHAKMMLIVRRVTQGGKSVLRRYVHLGTGNYHPRTARLYTDFGLMTSE PTICEDVHHVFQQLTGIGGELKLHEMWQSPFTLHPRLIEHIRAEAGNARAGKRARIVAKMNALLEPTVIAELYEASQAGV KIDLIVRGVCALQPGVPGLSENITVRSIVGRFLEHHRIYYFHANGEELVYLSSADWMDRNLFRRVEVAFPVRERKLKRRV IAEGLSVFLGDNQSAWLMQSDGHYRRRRAGKAPRNAQLGLLAKFC
Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) [H]
COG id: COG0855
COG function: function code P; Polyphosphate kinase
Gene ontology:
Cell location: Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polyphosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1788847, Length=662, Percent_Identity=35.1963746223565, Blast_Score=363, Evalue=1e-101,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003414 [H]
Pfam domain/function: PF02503 PP_kinase [H]
EC number: =2.7.4.1 [H]
Molecular weight: Translated: 77470; Mature: 77338
Theoretical pI: Translated: 7.33; Mature: 7.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRYPLLNRELGILGFNERVLAQAADPHVPLLERLRFICITSSNLDEFFEVRMAGLQEQ CCCCCCCCCCCCCEEECCHHHHHHCCCCCCCHHHCCEEEEEECCCHHHHHHHHHHHHHHH MRDNPGALAPDGMSLQHVYDLVVERAQRLVHRQYTMLHETILPALEQEGIYFHGTETWSD HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCC AQIEWARRYFFDELLPVLTPIGLDPAHPFPRVLNKSLNFVIELEGRDAFGRQAVMGIVQA HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHC PRALPRLVRMPHALSGFQHGFVLLSSLMQRFVGELFPKLVVKSCNQFRITRNSELFVDED HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECC EITNLRVALQGELPARHLGNAVRLEVSADTPAHLVRRLLDESGLTEKDCYRVDGPVNLVR CCCEEEEEEECCCCHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCEECCCHHHHHH LMQLPDLVDLPELKFTPFLPAISPAIANAPSMFDAIDHGDILLHHPYESFQPVLELLQQA HHHCCCCCCCCCCCCCCCCCHHCHHHCCCCHHHHHCCCCCEEEECCHHHHHHHHHHHHHH AQDPSVVAIKQTIYRTGTDSPLMDALMEAARNGKEVTVVVELLARFDEETNINWAAQLES CCCCCEEEHHHHHHHCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCCHHHHHHH VGAHVVYGVVGHKCHAKMMLIVRRVTQGGKSVLRRYVHLGTGNYHPRTARLYTDFGLMTS CCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCC EPTICEDVHHVFQQLTGIGGELKLHEMWQSPFTLHPRLIEHIRAEAGNARAGKRARIVAK CCHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHH MNALLEPTVIAELYEASQAGVKIDLIVRGVCALQPGVPGLSENITVRSIVGRFLEHHRIY HHHHHCHHHHHHHHHHHHCCEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCEEE YFHANGEELVYLSSADWMDRNLFRRVEVAFPVRERKLKRRVIAEGLSVFLGDNQSAWLMQ EEEECCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHEEECCCCCEEEEE SDGHYRRRRAGKAPRNAQLGLLAKFC CCCHHHHHHCCCCCCCCCCCHHHHCC >Mature Secondary Structure SLRYPLLNRELGILGFNERVLAQAADPHVPLLERLRFICITSSNLDEFFEVRMAGLQEQ CCCCCCCCCCCCEEECCHHHHHHCCCCCCCHHHCCEEEEEECCCHHHHHHHHHHHHHHH MRDNPGALAPDGMSLQHVYDLVVERAQRLVHRQYTMLHETILPALEQEGIYFHGTETWSD HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCCCC AQIEWARRYFFDELLPVLTPIGLDPAHPFPRVLNKSLNFVIELEGRDAFGRQAVMGIVQA HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHC PRALPRLVRMPHALSGFQHGFVLLSSLMQRFVGELFPKLVVKSCNQFRITRNSELFVDED HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECC EITNLRVALQGELPARHLGNAVRLEVSADTPAHLVRRLLDESGLTEKDCYRVDGPVNLVR CCCEEEEEEECCCCHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCEECCCHHHHHH LMQLPDLVDLPELKFTPFLPAISPAIANAPSMFDAIDHGDILLHHPYESFQPVLELLQQA HHHCCCCCCCCCCCCCCCCCHHCHHHCCCCHHHHHCCCCCEEEECCHHHHHHHHHHHHHH AQDPSVVAIKQTIYRTGTDSPLMDALMEAARNGKEVTVVVELLARFDEETNINWAAQLES CCCCCEEEHHHHHHHCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCCHHHHHHH VGAHVVYGVVGHKCHAKMMLIVRRVTQGGKSVLRRYVHLGTGNYHPRTARLYTDFGLMTS CCHHEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCC EPTICEDVHHVFQQLTGIGGELKLHEMWQSPFTLHPRLIEHIRAEAGNARAGKRARIVAK CCHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHH MNALLEPTVIAELYEASQAGVKIDLIVRGVCALQPGVPGLSENITVRSIVGRFLEHHRIY HHHHHCHHHHHHHHHHHHCCEEEEHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHCCEEE YFHANGEELVYLSSADWMDRNLFRRVEVAFPVRERKLKRRVIAEGLSVFLGDNQSAWLMQ EEEECCCEEEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHCHHEEECCCCCEEEEE SDGHYRRRRAGKAPRNAQLGLLAKFC CCCHHHHHHCCCCCCCCCCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA