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The map label for this gene is 126453196

Identifier: 126453196

GI number: 126453196

Start: 3850867

End: 3851163

Strand: Reverse

Name: 126453196

Synonym: BURPS1106A_3943

Alternate gene names: NA

Gene position: 3851163-3850867 (Counterclockwise)

Preceding gene: 126455443

Following gene: 126454127

Centisome position: 96.56

GC content: 65.32

Gene sequence:

>297_bases
ATGTCTCAATACGCGAAAATCAAGGCGCAGATCGTGGAGCTGCAAGCCCAGGCCGAAGAAGTACGTCGTCAGGAAATCGC
GGCCGTGGTCGCCGAGTTGCAAGGCAAGATCGCCGAGTACGGGCTCACGGCGCAGGACTTGGGGTTCGCCGAGCGGGCGC
GGCGCGGCCGGCCGCCGAAGAAGGGCCCGCTGCCCGCCAAGTACCGCGATCCGAAATCCGGCAACACGTGGAGCGGCCGC
GGCAAGCCCCCGCATTGGATCGTCGGCAAAAACCGCGAGCGCTTTTTGATCGGCTGA

Upstream 100 bases:

>100_bases
CGAAATAATTTTGGTGGATTTCGTAGCAATTCTGATTGCGCAATAGAACCTTTGTGTCTAGGCTGGGAATGCCAGGCGGA
TCATGATATAGGGAGTTGAA

Downstream 100 bases:

>100_bases
ATATCCGCCGCTTGGCAAAAAGAAAGCCGCATTTCCGGATGCGGCTTTCTGCTATGAAAAGCGTAATGGGCGCGTCATTT
CCGCAATGTCGCCGGTCGAA

Product: H-NS histone family protein

Products: NA

Alternate protein names: Histone-Like Nucleoid-Structuring Protein H-NS; H-NS Histone Family Protein; Hns-Like Protein; H-NS-Like Proteins; Nucleoid Protein H-NS; HNS-Like Transcriptional Regulator; Histone Family Protein Nucleoid-Structuring Protein H-Ns; H-NS-Like Protein; Histone-Like Nucleoid-Structuring Protein H-Ns; H-NS-Like Transcription Regulator; HNS-Like Transcription Regulator Protein

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MSQYAKIKAQIVELQAQAEEVRRQEIAAVVAELQGKIAEYGLTAQDLGFAERARRGRPPKKGPLPAKYRDPKSGNTWSGR
GKPPHWIVGKNRERFLIG

Sequences:

>Translated_98_residues
MSQYAKIKAQIVELQAQAEEVRRQEIAAVVAELQGKIAEYGLTAQDLGFAERARRGRPPKKGPLPAKYRDPKSGNTWSGR
GKPPHWIVGKNRERFLIG
>Mature_97_residues
SQYAKIKAQIVELQAQAEEVRRQEIAAVVAELQGKIAEYGLTAQDLGFAERARRGRPPKKGPLPAKYRDPKSGNTWSGRG
KPPHWIVGKNRERFLIG

Specific function: Unknown

COG id: COG2916

COG function: function code R; DNA-binding protein H-NS

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10967; Mature: 10836

Theoretical pI: Translated: 10.92; Mature: 10.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQYAKIKAQIVELQAQAEEVRRQEIAAVVAELQGKIAEYGLTAQDLGFAERARRGRPPK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHCCCCCC
KGPLPAKYRDPKSGNTWSGRGKPPHWIVGKNRERFLIG
CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEECCC
>Mature Secondary Structure 
SQYAKIKAQIVELQAQAEEVRRQEIAAVVAELQGKIAEYGLTAQDLGFAERARRGRPPK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHCCCCCC
KGPLPAKYRDPKSGNTWSGRGKPPHWIVGKNRERFLIG
CCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA