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The map label for this gene is mscL [H]

Identifier: 126453168

GI number: 126453168

Start: 2379107

End: 2379538

Strand: Direct

Name: mscL [H]

Synonym: BURPS1106A_2415

Alternate gene names: 126453168

Gene position: 2379107-2379538 (Clockwise)

Preceding gene: 126452003

Following gene: 126452058

Centisome position: 59.65

GC content: 58.56

Gene sequence:

>432_bases
ATGAGCATCATCAAGGAATTCAAGGAATTCGCCGTCAAGGGCAACGTCATGGACCTCGCCATCGGCGTGATCATCGGCGG
AGCGTTTTCGAAGATCGTCGACTCGGTGGTGAAGGATCTCATCATGCCCGTGATCGGCGTGCTGACGGGCGGCCTGGATT
TCTCGAACAAATTCGTGCTGCTCGGTCAGATTCCGGCTTCGTTCAAGGGCAATCCGGAATCGTTCAAGGATCTGCAGGCA
GCGGGCGTCGCGACGTTCGGCTACGGCTCGTTCATCACCGTGCTGATCAATTTCATCATCCTCGCGTTCATCATCTTCCT
GATGGTCAAGTTCATCAACAAGCTGCGCAAGCCCGAGGAGGCCGCGCCCGCCGCGACGCCCGAGGACGTGCTGCTGCTGC
GCGAGATCCGCGATTCGCTCAAGCAGCGCTGA

Upstream 100 bases:

>100_bases
ATCGATAAAGGATCGGGTTCGTTATGATGATGGCCATCAACGTGCCGTAACGAATCGTTGCGCTGCGCCTCATTTCATTT
TCGACAGGAGCAAGCCGCCC

Downstream 100 bases:

>100_bases
GCGCGCGCCGCGAACCGCAACAAAGCCCGCCTCCGCGCGGGCTTTTTTTCGTCGTCCGGATAGTTTTCGTCAACGCGGTG
CGCAAGGCAGAGAATACCCG

Product: large-conductance mechanosensitive channel

Products: non-specific ion/solute [Periplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MSIIKEFKEFAVKGNVMDLAIGVIIGGAFSKIVDSVVKDLIMPVIGVLTGGLDFSNKFVLLGQIPASFKGNPESFKDLQA
AGVATFGYGSFITVLINFIILAFIIFLMVKFINKLRKPEEAAPAATPEDVLLLREIRDSLKQR

Sequences:

>Translated_143_residues
MSIIKEFKEFAVKGNVMDLAIGVIIGGAFSKIVDSVVKDLIMPVIGVLTGGLDFSNKFVLLGQIPASFKGNPESFKDLQA
AGVATFGYGSFITVLINFIILAFIIFLMVKFINKLRKPEEAAPAATPEDVLLLREIRDSLKQR
>Mature_142_residues
SIIKEFKEFAVKGNVMDLAIGVIIGGAFSKIVDSVVKDLIMPVIGVLTGGLDFSNKFVLLGQIPASFKGNPESFKDLQAA
GVATFGYGSFITVLINFIILAFIIFLMVKFINKLRKPEEAAPAATPEDVLLLREIRDSLKQR

Specific function: Channel that opens in response to stretch forces in the membrane lipid bilayer. May participate in the regulation of osmotic pressure changes within the cell [H]

COG id: COG1970

COG function: function code M; Large-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscL family [H]

Homologues:

Organism=Escherichia coli, GI1789686, Length=150, Percent_Identity=52, Blast_Score=122, Evalue=9e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019823
- InterPro:   IPR001185 [H]

Pfam domain/function: PF01741 MscL [H]

EC number: NA

Molecular weight: Translated: 15578; Mature: 15447

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIIKEFKEFAVKGNVMDLAIGVIIGGAFSKIVDSVVKDLIMPVIGVLTGGLDFSNKFVL
CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
LGQIPASFKGNPESFKDLQAAGVATFGYGSFITVLINFIILAFIIFLMVKFINKLRKPEE
EECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AAPAATPEDVLLLREIRDSLKQR
CCCCCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SIIKEFKEFAVKGNVMDLAIGVIIGGAFSKIVDSVVKDLIMPVIGVLTGGLDFSNKFVL
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE
LGQIPASFKGNPESFKDLQAAGVATFGYGSFITVLINFIILAFIIFLMVKFINKLRKPEE
EECCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
AAPAATPEDVLLLREIRDSLKQR
CCCCCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: non-specific ion/solute [Cytoplasm] [C]

Specific reaction: non-specific ion/solute [Cytoplasm] = non-specific ion/solute [Periplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA