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The map label for this gene is yvdE [H]

Identifier: 126453163

GI number: 126453163

Start: 2914888

End: 2916216

Strand: Reverse

Name: yvdE [H]

Synonym: BURPS1106A_2970

Alternate gene names: 126453163

Gene position: 2916216-2914888 (Counterclockwise)

Preceding gene: 126453068

Following gene: 126454187

Centisome position: 73.12

GC content: 71.71

Gene sequence:

>1329_bases
ATGAGCGAAAACACGTCCGCAAGGGCCGATCAGTCCGGTTCTTCTTCTGCAGCGACGCCTCCGGAACACACCGGTCAGGC
GCCCTCGTCTTCCTCCGTCACAGACAAACCGCCCGCGGGCGCGACCGTTCACGTCGGCGCGTTCGCCGCGCAGATCGCAG
CCGCGCAGGATATCGGCGATCCGGGCTCGGCGCCGAGCGGCGCGATCGCCGAGCCCGGCGCGCCCGGCATCGCCGCCGGC
GGCACGGGCGTGGAGCCGGCCGCCGTGTCGGCCGGGCCCGGCGCGCACGCCGCCGCACCCTCCGGCGCGACGGGCGCGGG
CGCATCGGCGGCGGGTGCCGCTGCAGCCGGCGCGAGCGCGAAAGCCGGCTCGCCGCCGCCGGGCTTCGGCGCACCGCCCG
ATTTCGAGGCGTCGCGCCCGCCGCCGCCCGGCGCGGCCACGCCCGCGCCGCCGGCGTACCTGAAACAGAGCGACACGCCG
TGGTCGGTGTTCGGCCGGATCATCGCGGCGCGCGCGCGGCGGCTCTTCGATCGCGCCGGCCAACGGATCACGCAGCGTAC
GCTGCGCATCGGCGTGTCGGCGCGCATCTTCCATCCGGAAGTCGGCGCGCCGGGGCTGCGCGGCAAGACGCTGCAGTATC
TCGAGGAATCGATCGCGCACTGGGTGATGTCGCGCGACGTGCTCGTGTTCATGATTCCGACCGTCGGCCATCAGGGGATG
CTGCATCCGAGCAACATCCGGCTGCGCGACTACGCGAAGCATCTGGACGGGCTGTTGCTGCAGGGCGGCGCCGACGTGTC
GCCGCAGACCTACGCGGCGTCCGACGCGCGTCCCGAATGGCCCGGCGATCGCGTGCGCGACATGTACGAGCTCGAACTGC
TGCACGAGTTCGTCGAGTCGGGCAAGCCGGTGCTCGGCGTGTGCCGCGGCTGCCAGCTCATCAACGTCGCGTTCGGCGGC
TCGCTCTATCAGGACATCGCGAGCGACGTGCCCACCGCGGGCGCGCACGTCAGCGAGCACTACGATCAGCACCGGCATTC
GATCCGCTTTCCGGACGGCTCGACGCTCGCGAACATGTTTCCCGGCCGGCGCGAGGCGATCGTCAACTCGATTCACCATC
AGGCGATCCGCGACATCGGCCGCGATCTGAACATCGAGGCGGTATCGGCGGAAGACGGGATCATCGAAGGGATCCGCTAT
CGCCGCGCGCCGTTCGTCGTCGGCGTGCAGTGGCACCCGGAGTTTCATCGCGCGGGCGGCCCGGAGCTGCTCGACTGCAC
GCCGCTGCTCGACACGTTCCTGCGCGCGGCGCGCGAGACGCGGCTATAG

Upstream 100 bases:

>100_bases
ACAATATTGACGAAATTCTGTCGGTTTGCCGTCGATCGTGTACTGAAGCATAATGAATTCTTGTTGATTCTCCGCGTGAC
CGACGCGCCAGACTTCCGTC

Downstream 100 bases:

>100_bases
CCGGCGCGCGACGCGCTTTCTTCGCCGGCGGGAACGAGACGGGCCGCACTTCGGTGCGGCCCGTCGTTCGTTCGGCGTGC
GCGGCGTCGGCCCGCCGCGC

Product: peptidase C26

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MSENTSARADQSGSSSAATPPEHTGQAPSSSSVTDKPPAGATVHVGAFAAQIAAAQDIGDPGSAPSGAIAEPGAPGIAAG
GTGVEPAAVSAGPGAHAAAPSGATGAGASAAGAAAAGASAKAGSPPPGFGAPPDFEASRPPPPGAATPAPPAYLKQSDTP
WSVFGRIIAARARRLFDRAGQRITQRTLRIGVSARIFHPEVGAPGLRGKTLQYLEESIAHWVMSRDVLVFMIPTVGHQGM
LHPSNIRLRDYAKHLDGLLLQGGADVSPQTYAASDARPEWPGDRVRDMYELELLHEFVESGKPVLGVCRGCQLINVAFGG
SLYQDIASDVPTAGAHVSEHYDQHRHSIRFPDGSTLANMFPGRREAIVNSIHHQAIRDIGRDLNIEAVSAEDGIIEGIRY
RRAPFVVGVQWHPEFHRAGGPELLDCTPLLDTFLRAARETRL

Sequences:

>Translated_442_residues
MSENTSARADQSGSSSAATPPEHTGQAPSSSSVTDKPPAGATVHVGAFAAQIAAAQDIGDPGSAPSGAIAEPGAPGIAAG
GTGVEPAAVSAGPGAHAAAPSGATGAGASAAGAAAAGASAKAGSPPPGFGAPPDFEASRPPPPGAATPAPPAYLKQSDTP
WSVFGRIIAARARRLFDRAGQRITQRTLRIGVSARIFHPEVGAPGLRGKTLQYLEESIAHWVMSRDVLVFMIPTVGHQGM
LHPSNIRLRDYAKHLDGLLLQGGADVSPQTYAASDARPEWPGDRVRDMYELELLHEFVESGKPVLGVCRGCQLINVAFGG
SLYQDIASDVPTAGAHVSEHYDQHRHSIRFPDGSTLANMFPGRREAIVNSIHHQAIRDIGRDLNIEAVSAEDGIIEGIRY
RRAPFVVGVQWHPEFHRAGGPELLDCTPLLDTFLRAARETRL
>Mature_441_residues
SENTSARADQSGSSSAATPPEHTGQAPSSSSVTDKPPAGATVHVGAFAAQIAAAQDIGDPGSAPSGAIAEPGAPGIAAGG
TGVEPAAVSAGPGAHAAAPSGATGAGASAAGAAAAGASAKAGSPPPGFGAPPDFEASRPPPPGAATPAPPAYLKQSDTPW
SVFGRIIAARARRLFDRAGQRITQRTLRIGVSARIFHPEVGAPGLRGKTLQYLEESIAHWVMSRDVLVFMIPTVGHQGML
HPSNIRLRDYAKHLDGLLLQGGADVSPQTYAASDARPEWPGDRVRDMYELELLHEFVESGKPVLGVCRGCQLINVAFGGS
LYQDIASDVPTAGAHVSEHYDQHRHSIRFPDGSTLANMFPGRREAIVNSIHHQAIRDIGRDLNIEAVSAEDGIIEGIRYR
RAPFVVGVQWHPEFHRAGGPELLDCTPLLDTFLRAARETRL

Specific function: Unknown

COG id: COG2071

COG function: function code R; Predicted glutamine amidotransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutamine amidotransferase type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081871, Length=219, Percent_Identity=28.7671232876712, Blast_Score=83, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017926
- InterPro:   IPR011697 [H]

Pfam domain/function: PF07722 Peptidase_C26 [H]

EC number: NA

Molecular weight: Translated: 46020; Mature: 45889

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCEEHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SENTSARADQSGSSSAATPPEHTGQAPSSSSVTDKPPAGATVHVGAFAAQIAAAQDIGD
CCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCC
PGSAPSGAIAEPGAPGIAAGGTGVEPAAVSAGPGAHAAAPSGATGAGASAAGAAAAGASA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCC
KAGSPPPGFGAPPDFEASRPPPPGAATPAPPAYLKQSDTPWSVFGRIIAARARRLFDRAG
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
QRITQRTLRIGVSARIFHPEVGAPGLRGKTLQYLEESIAHWVMSRDVLVFMIPTVGHQGM
HHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCC
LHPSNIRLRDYAKHLDGLLLQGGADVSPQTYAASDARPEWPGDRVRDMYELELLHEFVES
CCCCCCHHHHHHHHHCCEEEECCCCCCCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHC
GKPVLGVCRGCQLINVAFGGSLYQDIASDVPTAGAHVSEHYDQHRHSIRFPDGSTLANMF
CCCHHHHHCCCEEEEEHHCCHHHHHHHHCCCCCCCHHHHHHHHHHCEEECCCCCHHHHHC
PGRREAIVNSIHHQAIRDIGRDLNIEAVSAEDGIIEGIRYRRAPFVVGVQWHPEFHRAGG
CCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHCCCCEEEEEEECCHHHHCCC
PELLDCTPLLDTFLRAARETRL
CCCEEHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]