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The map label for this gene is nosD [H]

Identifier: 126453147

GI number: 126453147

Start: 2109319

End: 2110569

Strand: Direct

Name: nosD [H]

Synonym: BURPS1106A_2116

Alternate gene names: 126453147

Gene position: 2109319-2110569 (Clockwise)

Preceding gene: 126454828

Following gene: 126453544

Centisome position: 52.89

GC content: 68.75

Gene sequence:

>1251_bases
ATGCCGATCCCCCACGCCCTCGCGACGCTCGCCGCAGCCGCGCTGCTGATGCACGCCGCGTGCGCGGCGACGCTTGCCGT
CCACCCGGGCGAGCGCATCGGCGCGGCGCTCGCCGCCGCGCGGCCGGGCGACACGGTGCTCGTCCAGCACGGCCGCTACG
AGGAGAACCTGAGAATCGACAAGCCGCTCACGCTGCGCGGCGTCGGCCGCCCGACGATCGACGGGCGCCTCGCGGGCGAC
GTGATCCGCGTCGCCGCGCCGGACGTGACGATCAGCGGCTTTTCGATCGTCGACAGCGGCGCGAGCCTCACCGCGCAAAA
CGCGGGCGTCTACGTGGCGCCCGGCTCCGATCGCGCGCGAATCGAGCGCTGCGAGCTCGTCTACAACCTGTTCGGTCTCT
GGATCGAGCGCTCGGCCGACGTGCGCGTCACCGGCAACGTGATCGTCGGCAAGCGCGATTTGCTGTCGCCCAGGCGCGGC
AACGGCATCCAGCTCTACAACACGACGGGCGCGCGCATCGCCGGCAACACGATCAGCTACACGCGCGACGGCATCTATGT
CGACGTGTCGCATCACGCGCGCTTCGAGCACAACACGATCCACGACGTGCGCTACGGCACGCATTACATGAACTCGTACT
ACAACGTCTGGGACGGCAACGACGTCTATCACAACCGCGGCGGCCTCGCGATCATGGAGGCGCGCGACCAGATCGTGCGC
GGCAACCGGGTATGGGGCAACACCGATCACGGCATCATGCTGCGCACGATCCAGGATTCGCTGATCGAGAACAACGTCGT
CGCCGGCAACCAGCGCGGCCTGTTCATCTACGACGCCGAATACAACACGATCCGCGGCAACCTCGTCGTCGACAACAAGA
TCGGCGTGCATCTGTGGGGCGGCTCGATCCACAACGACGTGACGGGCAACGATTTCGCGGACAACCGCGAGCAGATCCGC
TACGTCGCGGCGAGCGACGTCGCGTGGCCCGGCAACTACTGGAGCAACTACCTCGGCTGGGACCGGCGCGGCCGCGGCGT
CGGCGACGTGCCGTACAAGGCGAACGATCTCGTCGACCGGCTGACCTGGCGCGTGCCGTCGGTCAAGGTGCTGATGAACA
GTCCGGCCGTGCAGGCGCTGCGCGTCGTCGCGCGGCAGTTTCCGCTGCTCGCGGTGCCGAGCGTCGTCGACGACGCGCCG
CGCATGCGCGCCGCGCACGCCGGCTGGCCGCAATGGGTGGGCAAGCGATGA

Upstream 100 bases:

>100_bases
GGCGGCGCGCCCGCGCGAGCGCGGGCGGCGCGCGCCGCCTGACGACGCACGCGAATCGGCGCCACCCGGCCGAACCCGAC
CACACGACCCGACAACGACG

Downstream 100 bases:

>100_bases
TCGAGCTGACAGGCGTCGTCAAGACCTTCGGGCCGGTGCGCGCGGTCGACGGCATCGATCTCGCGATCGCGCCGGGCGAG
CTGTTCGGCCTCATCGGCCG

Product: copper ABC transporter, periplasmic copper-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 416; Mature: 415

Protein sequence:

>416_residues
MPIPHALATLAAAALLMHAACAATLAVHPGERIGAALAAARPGDTVLVQHGRYEENLRIDKPLTLRGVGRPTIDGRLAGD
VIRVAAPDVTISGFSIVDSGASLTAQNAGVYVAPGSDRARIERCELVYNLFGLWIERSADVRVTGNVIVGKRDLLSPRRG
NGIQLYNTTGARIAGNTISYTRDGIYVDVSHHARFEHNTIHDVRYGTHYMNSYYNVWDGNDVYHNRGGLAIMEARDQIVR
GNRVWGNTDHGIMLRTIQDSLIENNVVAGNQRGLFIYDAEYNTIRGNLVVDNKIGVHLWGGSIHNDVTGNDFADNREQIR
YVAASDVAWPGNYWSNYLGWDRRGRGVGDVPYKANDLVDRLTWRVPSVKVLMNSPAVQALRVVARQFPLLAVPSVVDDAP
RMRAAHAGWPQWVGKR

Sequences:

>Translated_416_residues
MPIPHALATLAAAALLMHAACAATLAVHPGERIGAALAAARPGDTVLVQHGRYEENLRIDKPLTLRGVGRPTIDGRLAGD
VIRVAAPDVTISGFSIVDSGASLTAQNAGVYVAPGSDRARIERCELVYNLFGLWIERSADVRVTGNVIVGKRDLLSPRRG
NGIQLYNTTGARIAGNTISYTRDGIYVDVSHHARFEHNTIHDVRYGTHYMNSYYNVWDGNDVYHNRGGLAIMEARDQIVR
GNRVWGNTDHGIMLRTIQDSLIENNVVAGNQRGLFIYDAEYNTIRGNLVVDNKIGVHLWGGSIHNDVTGNDFADNREQIR
YVAASDVAWPGNYWSNYLGWDRRGRGVGDVPYKANDLVDRLTWRVPSVKVLMNSPAVQALRVVARQFPLLAVPSVVDDAP
RMRAAHAGWPQWVGKR
>Mature_415_residues
PIPHALATLAAAALLMHAACAATLAVHPGERIGAALAAARPGDTVLVQHGRYEENLRIDKPLTLRGVGRPTIDGRLAGDV
IRVAAPDVTISGFSIVDSGASLTAQNAGVYVAPGSDRARIERCELVYNLFGLWIERSADVRVTGNVIVGKRDLLSPRRGN
GIQLYNTTGARIAGNTISYTRDGIYVDVSHHARFEHNTIHDVRYGTHYMNSYYNVWDGNDVYHNRGGLAIMEARDQIVRG
NRVWGNTDHGIMLRTIQDSLIENNVVAGNQRGLFIYDAEYNTIRGNLVVDNKIGVHLWGGSIHNDVTGNDFADNREQIRY
VAASDVAWPGNYWSNYLGWDRRGRGVGDVPYKANDLVDRLTWRVPSVKVLMNSPAVQALRVVARQFPLLAVPSVVDDAPR
MRAAHAGWPQWVGKR

Specific function: Involved in copper processing and transport; in the assembly of the copper chromophores of nitrous oxide reductase [H]

COG id: COG3420

COG function: function code P; Nitrous oxidase accessory protein

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006633
- InterPro:   IPR007742
- InterPro:   IPR022441
- InterPro:   IPR006626
- InterPro:   IPR012334
- InterPro:   IPR011050 [H]

Pfam domain/function: PF05048 NosD [H]

EC number: NA

Molecular weight: Translated: 45752; Mature: 45621

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIPHALATLAAAALLMHAACAATLAVHPGERIGAALAAARPGDTVLVQHGRYEENLRID
CCCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCCCCCEEEEECCCCCCCEECC
KPLTLRGVGRPTIDGRLAGDVIRVAAPDVTISGFSIVDSGASLTAQNAGVYVAPGSDRAR
CCEEEEECCCCCCCCEECCCEEEEECCCEEECCEEEECCCCCEEECCCCEEEECCCCHHH
IERCELVYNLFGLWIERSADVRVTGNVIVGKRDLLSPRRGNGIQLYNTTGARIAGNTISY
HHHHHHHHHHHHHHEECCCCEEEECCEEECCHHHCCCCCCCCEEEEECCCCEEECCEEEE
TRDGIYVDVSHHARFEHNTIHDVRYGTHYMNSYYNVWDGNDVYHNRGGLAIMEARDQIVR
ECCCEEEEECCCCCCCCCCCHHHHCCHHHHHCEEECCCCCCEEECCCCEEEEECCHHHHC
GNRVWGNTDHGIMLRTIQDSLIENNVVAGNQRGLFIYDAEYNTIRGNLVVDNKIGVHLWG
CCCCCCCCCCCEEEEEEHHHHHCCCEEECCCCCEEEEECCCCEEECCEEEECCEEEEEEC
GSIHNDVTGNDFADNREQIRYVAASDVAWPGNYWSNYLGWDRRGRGVGDVPYKANDLVDR
CCCCCCCCCCCCCCCHHHEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
LTWRVPSVKVLMNSPAVQALRVVARQFPLLAVPSVVDDAPRMRAAHAGWPQWVGKR
HHHCCCCEEEEECCCHHHHHHHHHHHCCCEECCHHHCCCCHHHHHCCCCCHHCCCC
>Mature Secondary Structure 
PIPHALATLAAAALLMHAACAATLAVHPGERIGAALAAARPGDTVLVQHGRYEENLRID
CCCHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHHHHCCCCCCEEEEECCCCCCCEECC
KPLTLRGVGRPTIDGRLAGDVIRVAAPDVTISGFSIVDSGASLTAQNAGVYVAPGSDRAR
CCEEEEECCCCCCCCEECCCEEEEECCCEEECCEEEECCCCCEEECCCCEEEECCCCHHH
IERCELVYNLFGLWIERSADVRVTGNVIVGKRDLLSPRRGNGIQLYNTTGARIAGNTISY
HHHHHHHHHHHHHHEECCCCEEEECCEEECCHHHCCCCCCCCEEEEECCCCEEECCEEEE
TRDGIYVDVSHHARFEHNTIHDVRYGTHYMNSYYNVWDGNDVYHNRGGLAIMEARDQIVR
ECCCEEEEECCCCCCCCCCCHHHHCCHHHHHCEEECCCCCCEEECCCCEEEEECCHHHHC
GNRVWGNTDHGIMLRTIQDSLIENNVVAGNQRGLFIYDAEYNTIRGNLVVDNKIGVHLWG
CCCCCCCCCCCEEEEEEHHHHHCCCEEECCCCCEEEEECCCCEEECCEEEECCEEEEEEC
GSIHNDVTGNDFADNREQIRYVAASDVAWPGNYWSNYLGWDRRGRGVGDVPYKANDLVDR
CCCCCCCCCCCCCCCHHHEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCHHHHHHH
LTWRVPSVKVLMNSPAVQALRVVARQFPLLAVPSVVDDAPRMRAAHAGWPQWVGKR
HHHCCCCEEEEECCCHHHHHHHHHHHCCCEECCHHHCCCCHHHHHCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2170125 [H]